Ostr027693.1
Basic Information
- Insect
- Oligia strigilis
- Gene Symbol
- -
- Assembly
- GCA_951800025.1
- Location
- OX637562.1:11347018-11347407[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-11 9.2e-09 35.9 0.0 1 45 17 61 17 61 0.94
Sequence Information
- Coding Sequence
- ATGCCTAATTACTACGTGCGGAAGGCGGTGGGTGCTCGAGGTAACTGGGATGAAGACGACCTGAAAAATGCCATGGATGAAGTGAAAAAACAAACAATGTCAGTATACAGAGCGTCTTTAATATATGGCATACCCAGAAAAACGTTAGAAAGAAGAGTCAAGCTGAATTATGACATAAAGAGACCTATGGGTCCTGCTTCTACGTTTGGTGCTGACAATGAAAAGAGACTTTGTAAACATATAAAAGAAATGCAATCTAAAGGGTTTCCTTTAACTATTGATGATACGAGAAAAATAGCATTCAGTTTTGCGGAGCAATTACATATAAAACACAGATTCAATCAAAATTTTGAAAAAGCTGGCTATGATTGGCTGCAACTGTTTTTGTAA
- Protein Sequence
- MPNYYVRKAVGARGNWDEDDLKNAMDEVKKQTMSVYRASLIYGIPRKTLERRVKLNYDIKRPMGPASTFGADNEKRLCKHIKEMQSKGFPLTIDDTRKIAFSFAEQLHIKHRFNQNFEKAGYDWLQLFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01093001; iTF_01030134; iTF_00758066; iTF_00758070; iTF_00758069; iTF_01026007; iTF_00375108; iTF_00445056;
- 90% Identity
- iTF_01030134;
- 80% Identity
- -