Ostr004792.1
Basic Information
- Insect
- Oligia strigilis
- Gene Symbol
- JARID2
- Assembly
- GCA_951800025.1
- Location
- OX637540.1:27651145-27654702[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-07 0.00027 22.3 0.5 13 50 748 785 737 810 0.85
Sequence Information
- Coding Sequence
- ATGTTGAGTCGGAAAAACCCACGCATTCCGTTGGGGCAGGGTGTCGCTCTAGCGACGTGGATGAGCATGTCCTTATGGAAATCATGGAAAATACCACAGCCAATCTTGAGCGTACTCGAAATGTGCAGTCGCAGCCACCGACGCCTTGCGTCGCCTCAGAGTGTCACTAGCGATGCGGATGAGCATGTCCTTATGGAAATTATGGAAAATACAGCCAATCTCGAGCGTGCTCAAAATATTCAGTTAGAATCACCAATGCCTTGTGCCGCGGCAGCGTGTCGCTCTGACAAGGACGTCATAAACGCGTCTAAGGAATTCCTGGACTCGCGCTGCAAAGTGTGCAAGCCTTGCATCAGAATTGACAAACTGATGAAAGTTTCCGCTTTGCTAGAATCTCTAATTGGATTATCGAGAAAGGGATGTCAAAATAAAGCCGCTGTTAAAGAGaatgaaccaaaaaaaaaaaaaaatgatgatgatgataaagaaATTGACCACGAAGAAGCTAATTCGACTAACGAAGACCCAGACGTCAATTTTGAGGGTCGGGACGTAACTTTGGTTAGTCGAGATGTCGATTTGGAAGGTAGAGAAGTTCGAAGCGACAACACAGATGGACGAAACGACATTCCGGTTAGTCGAAGGATTAGCACATCATCTGACAGCACTGCTGAGACGAGCGATGCTACGACTCAAGACCAAAAGACGCCAACCCGCCTTACAGCTGAGAAAAGACGGTTAAAGCGCATGGCTGTTAAAAAGAAGTTAGCTGAGCTGCATGAGCGCATGAGAGCAGAAAAGGAAAGAGAGATTGCCCGCGTCGAGGAAGAGAAGAGACGGGAAATATCGCGGATTACGGCGGAGAAGAATAGCGTTGTCGCGCAGATGTCGCGTGCACGATCGCGCTATCACGAGCGGTTTACCCAGATGGAGAAGGAGAAACAAAGAGATTTGGCACTCCTCAAGGTGAAGGTCAGACAGGAAGTGATATCTAAAATGGAGGCTACTCGCCTTATGTACAATAAAGTCGACGGCATAGCGGCGAACCTTGACAAAGAAAAGGATGCCAAGAATATGGATCCGGAAGAACTTTCAGATCAAGATGCGCCTGGCACCAGCAGCTCCATCCTGCCAACGGATGGCGGGTTGCTAGTAGAAGCTCCTGTATACCACCCTACCGAGGAAGATTTTCGTGATCCAATTCGATACTATGAGAAGATTTATCCAGAAGCAGTTCTATTTGGCATATGTAAGGTGGTGCCCCCTCCTGGTTATAAGCCACCCTTTCGAGTGCATGATGAAATGAGGTTCGATGTTATGAACCAATACATTTCACGATTGTTCAACCGCTGGGGACCGGCCGCGAGAGAACTTTGCGCGATCAAGTTGTCGCTGGCTcaacaaaaagttaattttacacgACCACCATTGGTGAGAAAACAGGGTCGAAACGACAACACAAAGGGTCTAAACGACATTCCGGTTAGTCGAAGGATTAGCATATCATCTGACAGCACTGCTGAGACGAGCGATGCCACGACTCAAGACCAAAAGACGCCAACCCGCCTTACAGCTAGGAAAAGACTGTTAAAGCGCATGGCTGTTAAAAAGAAGTTAGCTGAGCTGCGTGAGCGCATGAGAGCGGAAAAGGAAAGAGAGATTGCCCGCGTCGAGGAAGAGAAGAGACGGGAAATATCACGGATTACGGCGGAGAAGAAGAGCGTTGTCGCGCAGATGTCGCGTGCACGATCGCGCTACCACGAGCGGTTTACCCAGATGGAGAAGGAGAAACAAAGAGATTTGGCACTCCTCAAGGTGAAGGTCAGACAGGAAGTGATATCTAAAATGGAGGCTACTCGCCTTATGTACAATGAAGTCGACGGCATAGCGGCGAACCTTGACAAAGAAAAGGATGCCAAGAATATGGATCCGGAAGAACTTTCAGATCAAGATGCACCTGGCACCAGCAGCTCCATTCTGCCAACGGATGGCGGGTTGCTAGTAGAAGCTCCTGTATACCACCCTACCGAGGAAGATTTTCGTGATCCAATTCGATACTATGACAAGATTTATCCAGAAGCAGTTCTATTTGGCATATGTAAGGTGGTGCCCCCTCCTGGTTATAAGCCACCCTTTCGAGTGCACGATGAAATGAGGTTCGATGTTATGAACCAATACATTTCACGGTTGCTCAACCGCTGGGGACCGGCTGCGAGAGAACTTTGCGCGATCAAGTTGTCGCTGGCCCAACAAAAAGTAAATTTTACACGACCACCATTGCTGGATGGTGTCGAGGTAAACTTACCCAAATTATACCACCTCGTGCAACGGCACGGCGGTCTAGAAACGATTTACGTGAAGTATTTGCTACCATACGACACGCTTTCTCATCAGGAGCGCCAGGATATTATGCGGAAAGTCGAGATCGCATGGAACCGAAAGAATCAAAAGCTTTTGGACCGCGCCTTGAACCCGTTAAACCGCCAGCAGCGATTGCTTGGTTTAATACTCTTCTGA
- Protein Sequence
- MLSRKNPRIPLGQGVALATWMSMSLWKSWKIPQPILSVLEMCSRSHRRLASPQSVTSDADEHVLMEIMENTANLERAQNIQLESPMPCAAAACRSDKDVINASKEFLDSRCKVCKPCIRIDKLMKVSALLESLIGLSRKGCQNKAAVKENEPKKKKNDDDDKEIDHEEANSTNEDPDVNFEGRDVTLVSRDVDLEGREVRSDNTDGRNDIPVSRRISTSSDSTAETSDATTQDQKTPTRLTAEKRRLKRMAVKKKLAELHERMRAEKEREIARVEEEKRREISRITAEKNSVVAQMSRARSRYHERFTQMEKEKQRDLALLKVKVRQEVISKMEATRLMYNKVDGIAANLDKEKDAKNMDPEELSDQDAPGTSSSILPTDGGLLVEAPVYHPTEEDFRDPIRYYEKIYPEAVLFGICKVVPPPGYKPPFRVHDEMRFDVMNQYISRLFNRWGPAARELCAIKLSLAQQKVNFTRPPLVRKQGRNDNTKGLNDIPVSRRISISSDSTAETSDATTQDQKTPTRLTARKRLLKRMAVKKKLAELRERMRAEKEREIARVEEEKRREISRITAEKKSVVAQMSRARSRYHERFTQMEKEKQRDLALLKVKVRQEVISKMEATRLMYNEVDGIAANLDKEKDAKNMDPEELSDQDAPGTSSSILPTDGGLLVEAPVYHPTEEDFRDPIRYYDKIYPEAVLFGICKVVPPPGYKPPFRVHDEMRFDVMNQYISRLLNRWGPAARELCAIKLSLAQQKVNFTRPPLLDGVEVNLPKLYHLVQRHGGLETIYVKYLLPYDTLSHQERQDIMRKVEIAWNRKNQKLLDRALNPLNRQQRLLGLILF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -