Ostr004798.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oligia strigilis
Gene Symbol
JARID2
Assembly
GCA_951800025.1
Location
OX637540.1:27740092-27759045[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-19 2.5e-16 60.8 0.0 13 89 1257 1330 1246 1330 0.91

Sequence Information

Coding Sequence
ATGATCGTGCAAGTTATATCCCAAACAGCAGTAAGGCAGATTAGGACAGAAGCTTCGGTTCTTACGCACGTTTGCTTGCTCTGCGAAAACGCTTGCGTTAACCGATTGGCACGCTCGCGCCGCGTTCAAGCGCAGCGCAAGTTCGCGCAGGGCGCTTACGTGCCGCCGAATGTTGTCGCCGTCGTTGCTGCCGAAAACCGGCGGGACGCCGCGCAAGATCAAAGAAATGTTACCATCAACAACATGACGGCTACGCGCTTACTGGACGTCGTTTCTCTACAGAGTGACTCCAATTTGACTTCACAACCTGTAGTGATCGTTGAGAGGCTGCGCGGCAGGAACCTGACCCGCGACTTGATGCCGCCCCCATCGCAAAGAGAGACTGTTGAAACAAGACCTCGGGAATATCCTCATGAACGTGTGAACAATGTGGCCAGAATCAAGAAACCTGCGGAGTCACCAAAGTtgcaaactttaaaaaaaagaaaagaatataAAAGAGATCATCCTATGGCGCTAAGATCTCGGCGCCCGAGCAAGCTTGAATTAAACAGGCTTATAGCGAAAAGTTGTGCTCCTCTCAGAAAGACGGCCACAAAGCGCAAGAACTCATCTGACGAGGATGAACCCCTCATATTCCAGCAAATTCGCCTAAAGCAGACAGCAGAACAACTGAGCACTTCAACACAGACCACTGCCAGGGAGAGTGCTCCCAAGGAGATCACTCTTAAACCGAGCTCTCACAAGGAGAAATCTCCTAAAAATAAACCTTGCAAGAAGAGATCTAAAAAGGAGATCACCACAAACGAGGTCACCACACACGAGACCAAAACTACAAAGGAGATCACCAGAAGCAAGACCACTACAAAGGAGATCACCAGAAGCAAGACGACTACAAAGAAAATGACCACGAAAGAAATCTCTCTAAAGACTGATCAAAGGAATACCAAGCAAAGTATAGCTAGGAAAACTCCCATGAAGAGGACTCCGCAAAAAAGGATTCATAAGATATGTTCTCCCAAGCAGCCGGCGCATGTCGAGCCAGAGAGCTCCGTACCAGATTTCTCCATACCAGATTTCGACATTACCGTTATCAAGGAAGACCTCACTGATGAAACGTACATCCAGAACGATAAGGCAAATCTGGACACCCCAGATGAATCGGTTATCGAAGTCGTCCCGAATGAACCGCTATCCCCAGATGTCCTGGATAATCTCGTTGCCCCGGTTGTCCCAGTCGCCCCGGTTGTCCCAGTCGCCCCGGTTGTCCCAGTCGCCCCGGTTGTCCCAGTCTCGCTGGTTGTCCCAGTCGCCCCGGTTGTCCCAGTCGCCCCGGTTGTCCCAGTCGCCCCGGTTGTCCCAGTCACCACGGATGATCTAGTTATCCCGCCCGACCCGGTAATGCAGAATTACTCGGATATGCCGGAAGATCTTGACGAATTACTATCTTCTTTAGATGTGGTGCTCGCGAAAGAGGGTTTTTCTTTACCGAAGTATGCTGATAATTCGATGGTCAAGGATAAAGTTCGGAAGAGCCCGCAAACGATAACGGTGAGTATTGTACCGGTACCCAAAAAGCGTGTTCCCGAGGGCCGCCCGGATGACAAACCACATGTACCGAACCTCAGCGATGATGAACCGGTACAACCGatggtaaacaataattcacCGGTGATTTTGCACGATGTGCAGATGATCAACAATGATGTTCCGGAGGACACAGATGACGATTTAATGATCGATGAAGATGTTCCGGAGGACACGGATGATGGACCCAACGATAATGTTCCGGAGGACACGGGTGACCCAGATGTCCCATTGGTCCGGGAAGACGTGATGGATTCGCCGATTACGAACCTACGAATAGCTTCTCCAGAACCTGGACCAAGCGGCATGGCGATGCAATACAATTCTAGCTCCGAAGAATACGACGTGGAAGAATACTACTGTAATCACCCAATGTACTTAGGAAGAGTCGCGGATGACGAGGATGATGAGGACGCTCAAGACGGACAGGTTGTccgtcttgagcatcctcaaaATGTTGAGTCGGAAAAACCCACGCATTCCGTTGGGGCAGGGTGTCGCTCTAGCGACGTGGATGAGCATGTCCTTATGGAAATCATGGAAAATACCACAGCCAGTCTTGAGCGTACTCGAAATGTGCAGTCGCAGCCACCGACGCCTTGCGTCGCCTCAGAGTGTCACTCTAGCGATGCGGATGAGCATGTCCTTATGGAAATCATGGAAAATACCACAGCCAATCTTGAGCGTACTCGAAATGTGCAGTCGCAGCCACCGACGCCTTGCGTCGCCTCAGAGTGTCACTCTAGCGATGCGGATGAGCATGTCCTTATGGAAATTATGGAAAATACAGCCAATCTCGAGCGTGCTCAAAATATTCAGTTAGAAACACCAATGCCTTGTGCCGCGGCAGCGTGTCGCTCTGACAAGGACGTCATAAACGCGTCTAAGGAATTCCTGGACTCGCGCTGCAAAGTGTGCAAGCCTTGCATCAGAATTGACAAACTGATGAAAGTTTCCGCTTTGCTAGAATCTCAAATTGGATTATCGAGAAAGGGATGTCAAAATAAAGCCGCTGTTCAAGAGAATGAACCAACAGAAAGAGAAGGTGAAACTTCTGTTTCACCTTCTCTTTCTGTTGATAAAGAAATTGACCACGAAGAAGCTAATTCGACTAACGAAGACCCAGGTAATATTTACTTACTATTACCAAACCAAGCATCTATAATGATGAAAGTAAGAGCCAACATGGTACACGGCAAACAGTTCTTGGGGGTTGGTTTGGTCCCGAAAAATGAATCTCTTATAAACAAAGAGTTTTCGTTGGAGGAGCACGAACCGTTACTAGATCAAATTATTGAGAACCTGACAATCTATACAGACGTCAATTTTGAGGGTCGGGACGTAACTTTGGTTAGTCGAGACGTCGATTTGGAAGGTAGAGAAGTTCGAAGCGACAACACAGATGGACGAAACGACATTCCGGTTAATAGAAGGATTAGCACATCATCTGACAGCACTGCTGAGACGGGGGATGCTACGACTCAAGACCAAAAGACGCCAACCCGCCTTACAGCTGAGAAAAGACGGTTAAAACGCATGGCTGTTAAAAAGAAGTTAGCTGAGCTGCATGAGCGCATGAGAGCAGAAAAGGAAAGAGAGATTGCCCGCGTCGAGGAAGAGAAGAGACGGGAAATATCGCGGATTACGGCGGAGAAGAATAGCGTTGTCGCGCAGATGTCGCGTGCACGATCGCGCTATCACGAGCGGTTTACCCAGATGGAGAAGGAGAAACAAAGAGATTTGGCACTCCTGAAGGTGAAAGTCAGACAGGAAGTGATATCTAAAATGGAGGCTACTCGCCGTATGTACAATGAAGTCGACGGCATAGCGGCGAACCTTGACAAAGAAAAGGATGCCAAGAATATGGATCCGGAAGAATTTTCAGATCAAGATGCGCCTGGCACCAGCAGCTCCATTCTGCCAACGGATGGCGGGTTGCTAGTAGAAGCTCCTGTATACCACCCTACCGAGGAAGATTTTCGTGATCCAATTCGATACTATGAGAAGATTTATCCAGAAGCAGTTCTATTTGGCATATGTAAGGTGGTGCCCCCTCCTGGTTATAAGCCACCCTTTCGAGTGCATGATGAAATGAGGTTCGATGTTATGAACCAATACATTTCACGATTGTTCAACCGCTGGGGACCGGCCGCGAGAGAACTTTGCGGGATCAAGTTGTCGCTGGCTCAACAAAAGGTTAATTTTACACGACCACCATTGCTGGATGGTGTCGAGGTAAACTTACCCAAATTATACCACCTCGTGCAACGGCACGGCGGTCTAGAAACGGTTTATAACAAGAAGCGATGGGGCAAGGTCGCAGATGACATGAAGTTTAATAAAGGGCCTAATACTGAGAGGAGACTCGACCAGATTTACGTGAAGTATTTACTACCATACGACACGCTTTCTCATCAGGAGCGCCAGGATATTATACGGAAAGTCGAGATCGCATGGAACCGAAAGAATCAAAAGCTTTTGGACCGCGCCTTGAACCCGTTTAACCGCCAGCAGCGATTGCTTGGTTTAATAGACTCTTCTGACGATGAGACGGAAGATGAAGACACGATGGCCGCTGTCAATGAGGCAGAAGACTGCATCATCAAGGGCGCGGTCATGAACCGAGCTAAATTCAAAAAGGTACCCACGCCACTTACACTCTACTGTTAA
Protein Sequence
MIVQVISQTAVRQIRTEASVLTHVCLLCENACVNRLARSRRVQAQRKFAQGAYVPPNVVAVVAAENRRDAAQDQRNVTINNMTATRLLDVVSLQSDSNLTSQPVVIVERLRGRNLTRDLMPPPSQRETVETRPREYPHERVNNVARIKKPAESPKLQTLKKRKEYKRDHPMALRSRRPSKLELNRLIAKSCAPLRKTATKRKNSSDEDEPLIFQQIRLKQTAEQLSTSTQTTARESAPKEITLKPSSHKEKSPKNKPCKKRSKKEITTNEVTTHETKTTKEITRSKTTTKEITRSKTTTKKMTTKEISLKTDQRNTKQSIARKTPMKRTPQKRIHKICSPKQPAHVEPESSVPDFSIPDFDITVIKEDLTDETYIQNDKANLDTPDESVIEVVPNEPLSPDVLDNLVAPVVPVAPVVPVAPVVPVAPVVPVSLVVPVAPVVPVAPVVPVAPVVPVTTDDLVIPPDPVMQNYSDMPEDLDELLSSLDVVLAKEGFSLPKYADNSMVKDKVRKSPQTITVSIVPVPKKRVPEGRPDDKPHVPNLSDDEPVQPMVNNNSPVILHDVQMINNDVPEDTDDDLMIDEDVPEDTDDGPNDNVPEDTGDPDVPLVREDVMDSPITNLRIASPEPGPSGMAMQYNSSSEEYDVEEYYCNHPMYLGRVADDEDDEDAQDGQVVRLEHPQNVESEKPTHSVGAGCRSSDVDEHVLMEIMENTTASLERTRNVQSQPPTPCVASECHSSDADEHVLMEIMENTTANLERTRNVQSQPPTPCVASECHSSDADEHVLMEIMENTANLERAQNIQLETPMPCAAAACRSDKDVINASKEFLDSRCKVCKPCIRIDKLMKVSALLESQIGLSRKGCQNKAAVQENEPTEREGETSVSPSLSVDKEIDHEEANSTNEDPGNIYLLLPNQASIMMKVRANMVHGKQFLGVGLVPKNESLINKEFSLEEHEPLLDQIIENLTIYTDVNFEGRDVTLVSRDVDLEGREVRSDNTDGRNDIPVNRRISTSSDSTAETGDATTQDQKTPTRLTAEKRRLKRMAVKKKLAELHERMRAEKEREIARVEEEKRREISRITAEKNSVVAQMSRARSRYHERFTQMEKEKQRDLALLKVKVRQEVISKMEATRRMYNEVDGIAANLDKEKDAKNMDPEEFSDQDAPGTSSSILPTDGGLLVEAPVYHPTEEDFRDPIRYYEKIYPEAVLFGICKVVPPPGYKPPFRVHDEMRFDVMNQYISRLFNRWGPAARELCGIKLSLAQQKVNFTRPPLLDGVEVNLPKLYHLVQRHGGLETVYNKKRWGKVADDMKFNKGPNTERRLDQIYVKYLLPYDTLSHQERQDIIRKVEIAWNRKNQKLLDRALNPFNRQQRLLGLIDSSDDETEDEDTMAAVNEAEDCIIKGAVMNRAKFKKVPTPLTLYC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-