Ostr001572.1
Basic Information
- Insect
- Oligia strigilis
- Gene Symbol
- Jarid2
- Assembly
- GCA_951800025.1
- Location
- CATOHL010000441.1:25574-26289[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-20 9.9e-17 62.1 0.1 12 89 82 154 62 154 0.90
Sequence Information
- Coding Sequence
- ATGCGCTTTAACCGTCTTTTCTCAGCTACCCTTTGTGGAGTTTTTCGTGATCCAATTCGCTACTATGAGAAGATTTGTCCAGAAGCAGTTCGATTTGGCATATGTAAGGTGGTGCCCCCTCCTGCTTATAAGCCACCCTTTCGAGTGCATGATGAAATGAGGTTCGATGTTATGAACCAATACATTTCACGATTGTTCAACCGCTGGGGACCGGCCGCGAGAGAACTTTGCGCGATCAAGTTGTCGCTGGCCcaacaaaaagttaattttacacgACCACCATTGCTGGATGGTGTCGAGGTaaacttaccaaaattatacCACCTCGTGCAACGGCACGGCGGTCTAGAAACAGTATATAACAAGAAGCGATGGGGCAAGGTCGCAGAAGACATGAAATTTAATAAAGGGTCTGAGAGGAGACTCTACCAGATTTACGTAAAGTATCTGCTACCATACGACACGCTTTCTCATCAGGAGCGCCAGGATATTATGCGGAAAGTCGAGATCGCATGGAACCCGTTAAACCGCCAGCAGCGATTGCTTGGCTTAATAGACTCTTCTGACATGTCCGtaaggattgaggagccacatCAGATTTTTAAAATCTGA
- Protein Sequence
- MRFNRLFSATLCGVFRDPIRYYEKICPEAVRFGICKVVPPPAYKPPFRVHDEMRFDVMNQYISRLFNRWGPAARELCAIKLSLAQQKVNFTRPPLLDGVEVNLPKLYHLVQRHGGLETVYNKKRWGKVAEDMKFNKGSERRLYQIYVKYLLPYDTLSHQERQDIMRKVEIAWNPLNRQQRLLGLIDSSDMSVRIEEPHQIFKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -