Ostr004778.1
Basic Information
- Insect
- Oligia strigilis
- Gene Symbol
- JARID2
- Assembly
- GCA_951800025.1
- Location
- OX637540.1:27561418-27572192[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-17 3.3e-14 54.1 0.2 25 89 296 357 280 357 0.88 2 2 6e-20 1.3e-16 61.8 0.0 13 89 786 859 775 859 0.90
Sequence Information
- Coding Sequence
- ATGGATGAGGCCACGCTAAAAGTAATGAAGGCCTCCCGTGGCTATAATAAGGCTTCAATTACACGGCTATATCAATTTGTTTCAAACATCGAAGATGTGCAGCTCAGTAGTGCTGCAACATTACAGGCAAAAAGGGCTAGAATCATTGAATTATTTTCGGAATACGAGTCCTACAATAAAAAGATTCTCGCAATAGATGAAAAAGACGGTGAAAATGTCGAGGAGTGTGAAGCAAAGTATTTCCATATCTTAACAGTGCTGAATGAGGCGATCCTTGGAGTAAAGTTAGCCGATGTAGACTTTAACATCCCATCAGAGATAAATATGCTGATAGGCGCTGACATATTTTTCCAGGTGTTGCTACCGGAGCCGATAGAAGTTTTGCAGCAAGCAGCTTCGCAATTTGCTGAACAAACAGTTCAGCAACAACACCTGCAACCCCGCTTTATCAGTACAAGGTTTGGCCATGTCATAGCTGGTGCTTTAACAAACCATGCAGTCTCTGATAGAGATTCTCAAATTGCACTTGCATGGCTAACTACAGAGCCAATTAAGCTTCAAGCATATGTTGCTAATAGGGTTAAGTTAATTCAGGAGCAGACATCTAGATGGCGCTGGCTGTATGTGGCGAGCAACGAGAATCCAGCTGACTATGTTAGCAGGGGAGCCATTCCTGATGATCTACGTAACTGTAGTTTATGGTGGCATGGTCCAGAGTTTCTGCTAGACAGTATAATCAAAGCCAAATGTGCTAAGCAGCTAATGGGTTCCTTGCCATCTCAAAGAGTGACAGCTTGTCGTCCTTTCCAAAAGATTGGTATAGATTTTGCGGGACCAATTCAAGTAAAAAACTCGCGTGTCAGACGTGCTATACAAACAAAAGGTTATCTGGATGGTGTCGAGGTAAACTTACCCAAATTATACCACCTCGTGCAACGGCAGGGCGGTCTAGAAACGGTTTATAACAAGAAGCGATGGGGCAAGGTCGCAGATGACATGAAGTTTAATAAAGGGCCTAATACTGAGAGGAGACTCGACCAGATTTACGTGAAGTATTTACTACCATACGACACACTTTCTCATCAGGAGCGCCAGGATATTATGCGGAAAGTCGAGATCGCATGGAACCGAAAGAATCAAAAGCTTTTGGACCGCGCCTTGAACCCGTTAAACCGCCAGCAGCGATTGCTTGGTTTAATAGACTCTTCTGACGATGAGACGGAAGATGAAGACACGATGGCCGCTGTCAATGAGGCAGAAGACTGCATCATCAAGGGCGCGGTCATGAACCGAGCTAAATTCAAAAAGGATCCAATTCGATACTATGAGAAGATTTATCCAGAAGCAGTTCTATTTGGCATATGTAAGGTGGTGCCCCCTCCTGGTTATAAGCCACCCTTTCGAGTGCATGATGAAATGAGGTTCGATGTTATGAACCAATACATTTCACGATTGTTCAACCGCTGGGGACCGGCCGCGAGAGAACTTTGCGCGATCAAGTTGTCGCTGGCTcaacaaaaagttaattttacacgACCACCATTGGTGAGAAAACAGGGTCGAAACGACAACACAAAGGGTCTAAACGACATTCCGGTTAGTCGAAGGATTAGCATATCATCTGACAGCACTGCTGAGACGAGCGATGCTACGACTCAAGACCAAAAGACGCCAACCCGCCTTACAGCTGGGAAAAGACTGTTAAAGCGCATGGCTGTTAAAAAGAAGTTAGCTGAGCTGCATGAGCGCATGAGAGCGGAAAAGGAAAGAGAGATTGCCCGCGTCGAGGAAGAGAAGAGACGGGAAATATCACGGATTACGGCGAAGAAGAATAGCGTTGTCGCGCAGATGTCGCGTGCACGATCGCGCTACCACGAGCGGTTTACCCAGATGGAGAAGGAGAAACAAAGAGATTTGGCACTCCTCAAGGTGAAGGTCAGACAGGAAGTGATATCTAAAATGGAGGCTACTCGCCTTATGTACAATGAAGTCGACGGCATAGCGGCGAACCTTGACAAAGAAAAGGATGCCAAGAATATGGATCCGGAAGAACTTTCAGATCAAGATGCGGGTGGCACCAGCAGCTCCATTCTGCCAACGGATGGCGGGTTACTAGTAGAAGCTCCTGTATACCACCCTACCGAGGAAGATTTTCGTGATCCAATTCGATACTATGAGAAGATTTATCCAGAAGCAGTTCTATTTGGCATATGTAAGGTGGTGCCCCCTCCTGGTTATAAGCCACCCTTTCGAGTGCACGATGAAATGAGGTTCGATGTTATGAACCAATACATTTCACGGTTGCTCAACCGCTGGGGACCGGCCGCGAGAGAACTTTGCGCGATCAAGTTGTCGCTGGCCCAACAAAAAGTAAATTTTACACGACCACCATTGCTGGATGGTGTCGAGGTAAACTTACCCAAATTATACCACCTCGTGCAACGGCACGGCGGTCTAGAAACGGTTTATAACAAGAAGCGATGGGGCAAGGTCGCAGATGACATGAAGTTTAATAAAGGGCCTAATACTGAGAGGAGACTCGACCAGATTTACGTGAAGTATTTGCTACCATACGACACACTTTCTCATCAGGAGCGCCAGGATATTATGCGGAAAGTCGAGATCGCATGGAACCGAAAGAATCAAAAGCTTTTGGGCCGCGCCTTGAACCCGTTAAACCGCCAGCAGCGATTGCTTGGTTTAATAGACTCTTCTGACGATGAGACGGAAGATGAAGACACGATGGCCGCTGTCAATGAGGCAGAAGACTGCATCATCAAGGGCGCGGTCATGAACCGAGCTAAATTCAAAAAGGATCCAATTCGATACTATGAGAAGATTTATCCAGAAGCAGTTCTATTTGGCATATGTAAGGTGGTGCCCCCTCCTGGTTATTAG
- Protein Sequence
- MDEATLKVMKASRGYNKASITRLYQFVSNIEDVQLSSAATLQAKRARIIELFSEYESYNKKILAIDEKDGENVEECEAKYFHILTVLNEAILGVKLADVDFNIPSEINMLIGADIFFQVLLPEPIEVLQQAASQFAEQTVQQQHLQPRFISTRFGHVIAGALTNHAVSDRDSQIALAWLTTEPIKLQAYVANRVKLIQEQTSRWRWLYVASNENPADYVSRGAIPDDLRNCSLWWHGPEFLLDSIIKAKCAKQLMGSLPSQRVTACRPFQKIGIDFAGPIQVKNSRVRRAIQTKGYLDGVEVNLPKLYHLVQRQGGLETVYNKKRWGKVADDMKFNKGPNTERRLDQIYVKYLLPYDTLSHQERQDIMRKVEIAWNRKNQKLLDRALNPLNRQQRLLGLIDSSDDETEDEDTMAAVNEAEDCIIKGAVMNRAKFKKDPIRYYEKIYPEAVLFGICKVVPPPGYKPPFRVHDEMRFDVMNQYISRLFNRWGPAARELCAIKLSLAQQKVNFTRPPLVRKQGRNDNTKGLNDIPVSRRISISSDSTAETSDATTQDQKTPTRLTAGKRLLKRMAVKKKLAELHERMRAEKEREIARVEEEKRREISRITAKKNSVVAQMSRARSRYHERFTQMEKEKQRDLALLKVKVRQEVISKMEATRLMYNEVDGIAANLDKEKDAKNMDPEELSDQDAGGTSSSILPTDGGLLVEAPVYHPTEEDFRDPIRYYEKIYPEAVLFGICKVVPPPGYKPPFRVHDEMRFDVMNQYISRLLNRWGPAARELCAIKLSLAQQKVNFTRPPLLDGVEVNLPKLYHLVQRHGGLETVYNKKRWGKVADDMKFNKGPNTERRLDQIYVKYLLPYDTLSHQERQDIMRKVEIAWNRKNQKLLGRALNPLNRQQRLLGLIDSSDDETEDEDTMAAVNEAEDCIIKGAVMNRAKFKKDPIRYYEKIYPEAVLFGICKVVPPPGY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -