Basic Information

Insect: Oligia latruncula
Gene Symbol: -
Assembly: GCA_948474745.1
Location: OX419712.1:3475460-3490481[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.8 1.3e+02 3.7 0.4 5 21 292 308 290 309 0.91

2 13 0.0014 0.099 13.5 0.5 1 23 320 343 320 343 0.92

3 13 0.0023 0.16 12.8 0.2 2 21 381 400 380 401 0.94

4 13 2 1.4e+02 3.6 1.5 1 13 705 717 705 724 0.76

5 13 0.68 47 5.1 4.8 1 23 737 759 737 759 0.97

6 13 0.0044 0.31 11.9 0.9 2 23 765 786 764 786 0.96

7 13 0.51 35 5.5 1.4 1 23 809 830 809 830 0.80

8 13 0.0012 0.087 13.7 0.2 2 23 907 928 906 928 0.96

9 13 5e-07 3.5e-05 24.4 2.7 1 23 934 956 934 956 0.99

10 13 0.00014 0.01 16.6 0.2 2 23 962 983 961 983 0.94

11 13 0.0016 0.11 13.3 2.7 2 23 990 1012 989 1012 0.96

12 13 0.1 7.1 7.7 0.2 1 20 1019 1038 1019 1038 0.87

13 13 0.00015 0.01 16.6 1.2 3 23 1051 1072 1050 1072 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.8	1.3e+02	3.7	0.4	5	21	292	308	290	309	0.91
2	13	0.0014	0.099	13.5	0.5	1	23	320	343	320	343	0.92
3	13	0.0023	0.16	12.8	0.2	2	21	381	400	380	401	0.94
4	13	2	1.4e+02	3.6	1.5	1	13	705	717	705	724	0.76
5	13	0.68	47	5.1	4.8	1	23	737	759	737	759	0.97
6	13	0.0044	0.31	11.9	0.9	2	23	765	786	764	786	0.96
7	13	0.51	35	5.5	1.4	1	23	809	830	809	830	0.80
8	13	0.0012	0.087	13.7	0.2	2	23	907	928	906	928	0.96
9	13	5e-07	3.5e-05	24.4	2.7	1	23	934	956	934	956	0.99
10	13	0.00014	0.01	16.6	0.2	2	23	962	983	961	983	0.94
11	13	0.0016	0.11	13.3	2.7	2	23	990	1012	989	1012	0.96
12	13	0.1	7.1	7.7	0.2	1	20	1019	1038	1019	1038	0.87
13	13	0.00015	0.01	16.6	1.2	3	23	1051	1072	1050	1072	0.97

Sequence Information

Coding Sequence: ATGGCGGACACATCAAGAAAAAGGTCGAGAAAGTCGAAATTAGTGCCTCGAGAGTGTGCTGTTGACGAAGATGATCTTGAATTGCAGGTTTCAGAGGCGAAAATACCTAAATCCGTAAAACAGCCCACAAACAGACAACCAACAAAAACGGTGATTGTAAAACCACCAGAGCCAACCTTCTCTAAACAAGAAGATGTTGACACGAGCGTCCTAAGAAAAATAAACGCAGCAGCTAGAGATGATGAGCCACAAACTAAGATATCGCCAAGAAAGTTCGAGGTGAACATTGAAGTAGAATCATGTGACGATGACGATGAATTGGAAGGGCTTGCCGACGAAAATCGTTTAACACTGAATGTTAAAGAAACGACAAAAGAAACGACCGAACCTATTGAACTTTCTCGAGAAATCATTCTCGATGCTGCCGAGAATATACTCCAAGATTCAACAGATATTGCTGATAAAATTCTAAACATATATGTTAGGAATACGATAGGGTATGAGGAAAGGAGTAAACTGGAACAAGACTGGTATGAAAAGCGATTACAACAGACCTTAGATGAATGGCGTACTTGGCAGTTCCGTAGTTTTCACAGAGAAGACCCTCTTTTCTACAAATGCTATATCTGTACGCGGTCCTGGTGGCTTCTAACAGATTTCCGCAACCATTTGTCTTCGAAACATGCTAATGATTTATTGGTTATAATAGCTTTGGAAAAATATGAAATGCATGAAGTTAATGTGATAGCATACCACCATAGGCTTGTTGTTGTAAAAGATATATATACAGAAGGACTTTGTTACCGATGCGGTAAGGATTATAGTGCTCACGAGATAGAATCGAGGTTCCAGGAGAAATATTACAAAAACGAAGGTTGCACAAAACAGTTTTTTAGCTGTATGGGTCTAAGACACCATATTATTAGTTGTCCTACTTGTAAAAATGAGGATAAGCTATTCAAATGTGATATATGTAAGTCAAGATTTAATACAGAGGAGGAATTAAACAGTCATTTAGTGTTGTCTCATTCTGTTCGGTCTGATATACCGATAATGTCTCACTACAAGACCTGCAAGCGCTGCTCGGAGAGGTATTCTTGTCAGTATCTACATAAATGCGGACAAAAGGGACCTCATAGCGAGTGTCCACACTGTCTACAGAGTTTCTCAAATGTCATGTCTTTGGAAAATCATATGGAACGGTCAAGTAAACCTTACAAATGTGAAGTTTGCCGAGTGGTGATGTTATATAGCTGTAAGAAGTATGAACATATGTTGGAACACACAAAGAAGTATATGATAGTAAGGAAATGCGTAACGTGTGAGGGTTTGAATGTATTTTTAAATAATGAGGATGCAGTGGCACATTCGTTGTTGAAACATGAGTTCAAGAAAACAAAACGTCAGAGCTATTTTCCTAAAATTTTAGTACCGTCGTCCTGTGTATATGAAAGTTTAGCAGAATCAGAATGGAATGAACAAGTATCAGTACTGGAAGAACAAGAATCGGAATTAGAAGCACAAGAATTGGTACCGGAAGACCAAGAATCAGCACGGGAAGAAAAAGTATCGGTACTGGAAGAACAAGAATTCGTACTGGAAGGAACAGAATCCATACCAGAAGAAGAAGAAGAATTTGTACCGGAAGAAGAATCAGTATTAATAAAGAGTGAAAGAGAATCTGTTTCAGAATGTGAACAGAAATTGTTACAAGCAGAGCTAGAATCAGCAACAGAATTTTTATTGGGAACTGTTGTTGTCAAAGAAGAACCACAAGACTCAGAAGACAGCCCAAGACTTGTAATCAAAGAAGAACCATTCGATGAATTTGAAAACCGAATAAATGAAGAGAATCATACTGAGAATTTTGAACACCAAATAAGTGTCAAAGAAGAATACATGGAGGAAGAGTACGAAGAAGATATTATCAAACTGAACTTCAATATAGAAGACTTATTAGTGAAACAAGAATCAATTCAAGAAGATGACGATTATACTGTAGAACAGACAGAAGAGGACCAAGAAACACAAAATAATGACACAGAAGAAGAAGATTCCATGCTAGAACCAGAAGTTATTATCGAAGGGGATGATAGGAAAAGCAAAAAATTATACAGATGTACTAAATGTGGATTTACAGCGAAGCATAAACAATATAGAAATCACGTAGACTATAACTGCGGCACTAACCCAATGAAGCATAAAATGTACACATGCACAAAATGTCAGACTAAATTTGGGTCTATGAAAAAATATTTGACACATTTTAAACAGCATGGATACAAACACTTGTCCTGTCCTGATTGCCTGAAAGAATTCGACTCATTCACACATCTAGGGCAGCATATACAACAACATATCAAACAGAATTTTGTCCGAGTAAAAATGATCACACACGCGGGCAAGGCTATGACAAAACCTGATTATCAGTGCAAAAAATGCGGAAAGATCATAGTTCTTCATAACTTTTTTGAGCATTGGGAGCTGCATATAAATGCTCAACCTACGCATCCTATTAAAGTGACTTCAAGGCCTAAGCATAAACTTGGAGAGCTGCATGAAACTATCATAAAGGAGTGCATCGCCCGCTTGAACAGACAGCCAAAGGAATGCAACCATTGCCACCGTTGGTTCAAACGGGTCAACGAGTGCAAACGCCACATCATAGAACATCTATTAGGTGACGCATACAACCAGAAACACTTATACCAGGAGCTCAGATGCCAAATCTGTGAACAAGGGTTTCCTGTACCGGAGAAATATAAGCAACATATGCGCGACCATGCGTCCCTGCCAGTGTACAAGTGTGAACTTTGTGATCGTACATTCAGTGACTCAAGCAACTTTACGAAGCATAAAAAAGTGCATAACTTGAAAGTGATTGTCTGTGATTTGTGCGGTAAAAAGTTTCAGTCGAAGATTTCTTTGGAGAAGCATATTGTGCAACACATGGAGTCACAGCCGATAACCTGCAAGATTTGCAACAAAACCTTCTTCTTCGATACTTCTTATCGACGCCATGTAAGATCCTTCCACGAGAAACCCGTCATGGGCTACCGGTGCGTTATCTGCGGTGAACGCTTCGACACTCTTAAATTTAAATGGGAACATATGTGGGAGGTGCACAAGGAAAGGAAGCAGAAAGCCGACTGCCCCATATGCCACAAGTCCTTCAGGAAGTATTCCGACGTCCGGCTCCACGCAAGGGTGAACCATCTGGCGGAAGTTTCAGTGTTGAACGTCAAAAAACAGGCAACAAAGTCCAATATAGATATTGATAACTACTTGGGAGATCCTGCGAAGATCAAAGCTGGGAGGATGGAGACTTTGGTTGTGTATGACTCCGATTGA
Protein Sequence: MADTSRKRSRKSKLVPRECAVDEDDLELQVSEAKIPKSVKQPTNRQPTKTVIVKPPEPTFSKQEDVDTSVLRKINAAARDDEPQTKISPRKFEVNIEVESCDDDDELEGLADENRLTLNVKETTKETTEPIELSREIILDAAENILQDSTDIADKILNIYVRNTIGYEERSKLEQDWYEKRLQQTLDEWRTWQFRSFHREDPLFYKCYICTRSWWLLTDFRNHLSSKHANDLLVIIALEKYEMHEVNVIAYHHRLVVVKDIYTEGLCYRCGKDYSAHEIESRFQEKYYKNEGCTKQFFSCMGLRHHIISCPTCKNEDKLFKCDICKSRFNTEEELNSHLVLSHSVRSDIPIMSHYKTCKRCSERYSCQYLHKCGQKGPHSECPHCLQSFSNVMSLENHMERSSKPYKCEVCRVVMLYSCKKYEHMLEHTKKYMIVRKCVTCEGLNVFLNNEDAVAHSLLKHEFKKTKRQSYFPKILVPSSCVYESLAESEWNEQVSVLEEQESELEAQELVPEDQESAREEKVSVLEEQEFVLEGTESIPEEEEEFVPEEESVLIKSERESVSECEQKLLQAELESATEFLLGTVVVKEEPQDSEDSPRLVIKEEPFDEFENRINEENHTENFEHQISVKEEYMEEEYEEDIIKLNFNIEDLLVKQESIQEDDDYTVEQTEEDQETQNNDTEEEDSMLEPEVIIEGDDRKSKKLYRCTKCGFTAKHKQYRNHVDYNCGTNPMKHKMYTCTKCQTKFGSMKKYLTHFKQHGYKHLSCPDCLKEFDSFTHLGQHIQQHIKQNFVRVKMITHAGKAMTKPDYQCKKCGKIIVLHNFFEHWELHINAQPTHPIKVTSRPKHKLGELHETIIKECIARLNRQPKECNHCHRWFKRVNECKRHIIEHLLGDAYNQKHLYQELRCQICEQGFPVPEKYKQHMRDHASLPVYKCELCDRTFSDSSNFTKHKKVHNLKVIVCDLCGKKFQSKISLEKHIVQHMESQPITCKICNKTFFFDTSYRRHVRSFHEKPVMGYRCVICGERFDTLKFKWEHMWEVHKERKQKADCPICHKSFRKYSDVRLHARVNHLAEVSVLNVKKQATKSNIDIDNYLGDPAKIKAGRMETLVVYDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01093596;
90% Identity: iTF_01095409;
80% Identity: -