Basic Information

Insect: Oligia latruncula
Gene Symbol: -
Assembly: GCA_948474745.1
Location: OX419709.1:11319366-11351298[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 8 5.6e+02 1.7 1.5 6 15 58 67 55 70 0.76

2 13 1.2 82 4.3 0.2 1 23 494 516 494 516 0.95

3 13 0.0029 0.2 12.5 1.7 1 23 529 551 529 551 0.96

4 13 0.00056 0.039 14.8 0.9 1 23 557 579 557 579 0.98

5 13 0.00056 0.039 14.8 0.9 1 23 601 623 601 623 0.98

6 13 1.3e-05 0.00089 19.9 2.4 1 23 666 688 666 688 0.99

7 13 2.5e-06 0.00017 22.2 0.4 1 23 694 716 694 716 0.93

8 13 6.5e-07 4.6e-05 24.0 0.2 1 23 722 744 722 744 0.98

9 13 2.5e-05 0.0017 19.0 2.7 1 23 750 773 750 773 0.96

10 13 0.00053 0.037 14.8 3.2 1 23 779 802 779 802 0.95

11 13 8.6e-05 0.006 17.3 2.3 2 23 809 830 808 830 0.97

12 13 1.2e-05 0.00083 20.0 1.0 1 23 836 858 836 858 0.97

13 13 0.032 2.2 9.3 0.1 1 23 864 888 864 888 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	8	5.6e+02	1.7	1.5	6	15	58	67	55	70	0.76
2	13	1.2	82	4.3	0.2	1	23	494	516	494	516	0.95
3	13	0.0029	0.2	12.5	1.7	1	23	529	551	529	551	0.96
4	13	0.00056	0.039	14.8	0.9	1	23	557	579	557	579	0.98
5	13	0.00056	0.039	14.8	0.9	1	23	601	623	601	623	0.98
6	13	1.3e-05	0.00089	19.9	2.4	1	23	666	688	666	688	0.99
7	13	2.5e-06	0.00017	22.2	0.4	1	23	694	716	694	716	0.93
8	13	6.5e-07	4.6e-05	24.0	0.2	1	23	722	744	722	744	0.98
9	13	2.5e-05	0.0017	19.0	2.7	1	23	750	773	750	773	0.96
10	13	0.00053	0.037	14.8	3.2	1	23	779	802	779	802	0.95
11	13	8.6e-05	0.006	17.3	2.3	2	23	809	830	808	830	0.97
12	13	1.2e-05	0.00083	20.0	1.0	1	23	836	858	836	858	0.97
13	13	0.032	2.2	9.3	0.1	1	23	864	888	864	888	0.93

Sequence Information

Coding Sequence: ATGAACCAGTGTTGCTTTATCTGCAACAACAGGGCTGGCCTCTCCCTAAGAAATGCTTCCAGCCTGTTTGGAGAGCATAACACATTGCAATCGGGCAAGAAAGTATCGGAAGTTGTGAGTGAGATTGTGGGCAAATCGGTGCAAGAGAATAAAGTACATACCAATATACTGTGTAAGAAATGCTTTAAGACATGCTCTGAGTATGATAGCATTCAAGTCAGATTACAAACAATAAAAACTGATTTAATAGGACAATTCAAATTATCGTTACCTAATTATAATTTAGACTATGAAAACTATGAGCAGAATGTCTCTTCGCCGCCGAAACCCAAACCACTCCTGGGTAAAAAGTTGGTGTTACCAGCATCAAAATTACAACCGATACCACCGGATTTGTTGCTCAAAGTGGGGAAATTGGCACCGTTCTCCAAATCTAACATGATTTTACCACAGATTAAGCCCTCCACAGCCTCAACATTAAACCTCAAAGTGACCGTTGGATCATCAGTCCTAACACAAACGATAACAACATCAAACAGTAAACCCGTTGAGAAACCTACTTTAGACTCAAATTCCATCCTGACTTCACTCTCCAACGCTTTGAAGGATGACCTAGAAAGTATGGTGACTGTTCAAAGTAATATGAACTCTATGAACCAAAAGAATTCAATATTGAGTTTTAGTGTGAACTCTTTGCCTAAGGACTTTCTTTCTGGCGCCATTTTGAGGAAAATTGAGGAAAAGGATGAGGATTATGAACAGGGGGAGGAGAGGAATGAGGATCATCCTATGGAGATTGATGAAGATTGTTTGTCTGTGGTTCCTGCCACGTCTGCCGATGGTGGAAACTTAGTATTACAAGTTGAAGGACTACAGGCCAAGTCCGACCCTACTGCCGAAGTGAGCGAATACTTAAACCTGCCGACACTAGATGGCGTTGATGAGGAGAGTGACGCACAGAAGTACATCCTCGGCAAGTTGGAGATACTCAACGAGGAAGATGAAGACGACGACGACGATGAAGGCCACACCATAGTGGTAGATAGTGAAAACGGCTCTATTCTGCGAATGGTGGCCGGACAGAAGTTCATATACGAGGGCGGAGAGATATCACTGGTGATGCCTGATGATGATGAGCAGCAAGACGGTGATGGTGACCATCTCGAGAATGGTGATAGTCAAGATTCTAATGATGAGTCACAGATCGAGTTACAAGTATCTGGCGACGAGGAAACTGCGAACGCTATCATTGCAGCTGCTCAAGAACAAGGCGGCGCCTTCATTAAGGTAGAGTCTGGCGAGATGTTCCGCGTGAAATCCGTCTGCAGCGCCGCGCCGCACGACGCGCTGCAGATCGTGGCGCAGGAGGGCAATCTGTTCAAGTGCCTGCTGTGCGAGAAGAGTGATGATACTCCCTCAAGTGTTGAAGACGCAGACACAATGATGCGCCACTTAAAATCAAAGCATGACGCGAGGATATACCTGTGTCGCTTCTGTGGCGCCGTCATGAGGAAACGCACGGAATATGCCACGCATATAGCGTCGCATGCGCACTCAGCGCCGCCCCGCGCCCGGCCGGGCGCGCACCGCTGCGGCGCGTGCGGCAAGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCATCAAGCGCATCTGAAGACTCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCATCAAGCGCATCTGAAGACTCATGCGGTGAGTATAGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTGCGCCCGCGTCCCTACAAATGCACTCAATGCGGTAAATCGTTCCTCACGCAACAAAATTTGAATCAGCATGAGAAAACACATTCAGGAGTCAAGGATTTTGTCTGTAATATATGCAACAAAGCCTTCAGTACGCAACATAACTTGGAAGTGCACGGCGTGGTACACTCCGGGAACAAAGCGTTTGTGTGCAGCGTGTGCAGCAAAGCGTTCGCGAGGAGAGCAGAGTTGAGGGACCACATGCGGATACACACGGGCGAGCGTCCATTCTCGTGTGACATCTGCGGGTCTCGCTTCACTCAGCGCTCCAACTTACACTCGCACCGCAGAGCGACGCACTTCGACGACAAGCGATACCACTGCTTACAGTGTCCGAAGAAGTTCAAGAGAAGGAGATTACTAGAATACCACATAAAGGCGTCGCACACTGGCGAGCGGCCGCTGAAGTGCGGCATCTGTCACCTGTCGTTCGTGTACCCCGAGCATTACAAGAAACACGTGCGGATACACAGCGGGGAGAGGCCCTATGTCTGTGAGATTTGCGGCAAATCGTTCAACTCCCGCGACAACCGCAACACACACCGCTTCGTGCACAGCGACAAGAAGCCCTACGAGTGCGTCGCGTGCGGCGCCGGGTACATGCGCAAGCAGCTACTGTACGCGCACATGAACACCAGCGGACATCTTGCGGAGTCGATAGTAGTGAATCAACCTAGGGTGATCAAAGTTACTGAAAATGGCACGAATCAACAAGCAGAAATTACACACATAGAAGCGAAAAATAGTAAATTTGATGCGATATTTGAATCCAGTGAATTGGAGGCGAGCGTAAAGTCTGTCGTGAAAGCGGAGACTGAAGTGAATCTAGAAGACGCCAAGTTCTACATAACGGAAGATAAGAAGTTAATATTACAAGATAGTGATAAAACAACTTTAAATCTAATACAAGAGGGCGATGAGTCTACATTGCTGACTATACATAATATAGGAGAGAGAGCCGAGGGAACTATACTAGAAGCTGTAGATGCTGATCAACTCGGGGAACAGACTGAGATCGTAGCGAATGACGAAAATGGCGGTATGGTGCGTCTAATACAAATCAAACTGCCGGACGGGAACAACGGATGGGTCGCCATTAACCGCTGA
Protein Sequence: MNQCCFICNNRAGLSLRNASSLFGEHNTLQSGKKVSEVVSEIVGKSVQENKVHTNILCKKCFKTCSEYDSIQVRLQTIKTDLIGQFKLSLPNYNLDYENYEQNVSSPPKPKPLLGKKLVLPASKLQPIPPDLLLKVGKLAPFSKSNMILPQIKPSTASTLNLKVTVGSSVLTQTITTSNSKPVEKPTLDSNSILTSLSNALKDDLESMVTVQSNMNSMNQKNSILSFSVNSLPKDFLSGAILRKIEEKDEDYEQGEERNEDHPMEIDEDCLSVVPATSADGGNLVLQVEGLQAKSDPTAEVSEYLNLPTLDGVDEESDAQKYILGKLEILNEEDEDDDDDEGHTIVVDSENGSILRMVAGQKFIYEGGEISLVMPDDDEQQDGDGDHLENGDSQDSNDESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMFRVKSVCSAAPHDALQIVAQEGNLFKCLLCEKSDDTPSSVEDADTMMRHLKSKHDARIYLCRFCGAVMRKRTEYATHIASHAHSAPPRARPGAHRCGACGKCYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHAVSIVLQLAHAAGRARQPALGRAALRLRAVREGLRLQVRPRPYKCTQCGKSFLTQQNLNQHEKTHSGVKDFVCNICNKAFSTQHNLEVHGVVHSGNKAFVCSVCSKAFARRAELRDHMRIHTGERPFSCDICGSRFTQRSNLHSHRRATHFDDKRYHCLQCPKKFKRRRLLEYHIKASHTGERPLKCGICHLSFVYPEHYKKHVRIHSGERPYVCEICGKSFNSRDNRNTHRFVHSDKKPYECVACGAGYMRKQLLYAHMNTSGHLAESIVVNQPRVIKVTENGTNQQAEITHIEAKNSKFDAIFESSELEASVKSVVKAETEVNLEDAKFYITEDKKLILQDSDKTTLNLIQEGDESTLLTIHNIGERAEGTILEAVDADQLGEQTEIVANDENGGMVRLIQIKLPDGNNGWVAINR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01095167;
90% Identity: iTF_00124514;
80% Identity: -