Olat012224.1
Basic Information
- Insect
- Oligia latruncula
- Gene Symbol
- -
- Assembly
- GCA_948474745.1
- Location
- OX419713.1:4118528-4130625[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 2.8 2e+02 3.1 5.3 1 23 435 456 435 456 0.91 2 26 0.24 16 6.5 0.7 2 23 527 548 526 548 0.96 3 26 6.5e-05 0.0045 17.7 1.2 1 23 552 574 552 574 0.97 4 26 0.017 1.2 10.1 0.4 1 23 579 602 579 602 0.90 5 26 0.028 2 9.4 0.3 2 23 610 632 610 632 0.89 6 26 0.004 0.28 12.1 1.4 3 23 641 661 639 662 0.93 7 26 0.00036 0.025 15.4 0.2 2 23 669 690 668 690 0.95 8 26 0.0001 0.0072 17.1 0.3 1 23 696 718 696 718 0.98 9 26 5.5 3.8e+02 2.2 1.5 1 23 808 831 808 831 0.91 10 26 0.92 64 4.6 0.4 1 23 856 879 856 879 0.95 11 26 0.0026 0.18 12.7 3.0 1 23 901 923 901 923 0.97 12 26 9.2e-05 0.0064 17.2 0.7 1 23 927 949 927 949 0.96 13 26 0.037 2.6 9.0 0.7 1 23 954 977 954 977 0.90 14 26 0.24 17 6.5 0.0 2 23 984 1006 984 1006 0.94 15 26 3.5e-05 0.0024 18.6 3.1 1 23 1013 1036 1013 1036 0.96 16 26 0.0077 0.54 11.2 2.8 1 23 1042 1064 1042 1064 0.98 17 26 2.9 2e+02 3.1 0.5 1 22 1219 1240 1219 1242 0.88 18 26 0.17 12 7.0 0.8 2 23 1268 1290 1267 1290 0.95 19 26 0.046 3.2 8.7 4.0 2 23 1313 1334 1312 1334 0.95 20 26 0.0008 0.056 14.3 0.5 1 23 1338 1360 1338 1360 0.96 21 26 0.002 0.14 13.0 1.4 1 23 1365 1388 1365 1388 0.96 22 26 0.046 3.2 8.7 0.4 2 23 1396 1418 1396 1418 0.91 23 26 0.0037 0.26 12.2 5.4 1 23 1425 1448 1425 1448 0.97 24 26 0.00091 0.063 14.1 2.4 1 23 1454 1476 1454 1476 0.97 25 26 0.00019 0.013 16.2 3.4 1 23 1482 1504 1482 1504 0.98 26 26 0.0003 0.021 15.6 2.8 1 23 1510 1533 1510 1533 0.98
Sequence Information
- Coding Sequence
- ATGTCGGTGGAAAAAGCTGAGATAGAGACGTTTTTCGGTAGATGTAGGTGTTGTCTCTCCTATGGCTACTTAAAAAACATGTGGGCAGAACATCAATTTGAAGGAGAAGCAGAAATCTACGGCGAGATGCTTGTACAATGTTTTGCACTGACTTGGGATCATTCGGAGGACTCGATGGAACAGGATCAGATATGTGAGCAGTGCATCTTTCGGTTGCGAGATGCTAGTGATTTTAAGAGGGTGGTCTTGGACTCACAAGCGGAGCTGTTCCAACAGATAGATGCTGAAAATGAAATGAGCATCAAAGAAGAAAGACTAGATGAGGAATACCTCATAGAGTACAATCCTCCTCCTCCTGACAGCGAAGACACCGGGGACACTATGTACGCTGACACAGAATACGCTATGGACATTGTTGACACTGTGATGAGTGTCAAAGATGAGACGGAGTATGAGGAGGTTGAGTATTTGGAAGAAGAAGATGCTAGTGGAGCGAATGATGCTGTTGATACTGACTCCTCACAGCCAACAGATCGGTTAAGACCCGTGAAACGGCGAAAGCAACCTCGTAAACAAGACACAGATGACGAGGAAGCGCCAAAACGGAAATGGCCCAGGAAGCTGCCCAAATCGGAACGGCACAGGACTTACAAACAGTACTCTGAGCTTGACCTACGTACATGTTTGGAAGAAGTTAGGAACAATGAACTGACGGCTGCTGAAGCGGCTTTGAAGTATGATATACCGAAGAAGACTATTTGTGCCAAGATCAAAATGGATCCTAACGATGTCCGGACAGACATCCAGAACTCTATAAACAACACAACTACCCGCGAAACTGTGACAACGAGCCAACTAGAGGTACCCATACTATCACACGAAGACATAATTCAAACGGACACAGATACAGAAAGCCAGGAAGTGGCAAACAAGTACCACCCACTATTACACGAAGCAGCGAAAGTGACAGGCTCGGACACAGAAAGCTTGGAAGTACCAAACAAGTTCCAAGTATCACATGAAGAGCCGAAAGTGACAGACTCTGTCACAGAAAGCCAAGAAGTGCCAAACAAGTACCAACTATCACACAAAGAGCCAAAAGAGACAGAATCAAAGGCAGAAAGCCAGGAAGTACCTATTAAGTACCCAATATTAGACGAAGAGGCAAAAAAGACAAACTCAGACACAGAAAGCCAGGGAGAAGTACCAAACAAGTTCCAAATGCTTAAACACAAGAATAACCTCAAAATGATCCTTAAATACTCAAACGCAACATTAATTAAAGGAAATTCAGCCGCAGGATACTCCTGCTGGTTTTGCTATAAACATTTTAGTCCAGAAAAACTAAAAAAACATAATTTTCAACACGGAGATGTGTACGATGATGCTATAAAAGTAAAATACGTTTCAGATTTAATTATAAAACTTGATGTTACTGGACTTAAATGCAGGCTATGTGAGGAAAAAATCCACAGTCTTGAACAATTGATGGTCCATTTCCAAGAAAATCATAACAAAACTATTTATACGGACATAGACAACCATTTAATACCTTTTAAATTTGACACGGACAAGTTACAATGCGTTATTTGTGCAGCAGAGTTCAAATACTTCAAACTGCTCTCAGAGCATATGTGTGAACATTACAGTAACTACAATTGCCCGGAATGCGACCGTGTCTTTATAAATAAACAATCAATGCAAACACATCGATACAGACATAAGAAAGGAGAATACAAATGTTCACAATGCCCAAAAATCTTCGACAGTCCCATGAAAATACGCGAACACGAATACGTAACTCACAAACTATCGAATAAGAAGAGAAAGTGTGGCTTCTGTGACGAGAAATTCTCGTCAGCAGACTTAGTAAAGAATCATGAAGCTGAAAACCATGGCGTCGCTCGTTCTCGACTAAACTGTGAAGCTTGCAACAGGCCTTTCGCTACACAGAAAACTCTTGCAGTACATAAGAAGAGACACCATCTGGTAATGCGTCCTTTGGAATGTGAAACTTGTGGGAAAGGTTTTTATACGCGACAGGAACTCAACTGGCACTCGGTTACCCATACAAAGACCAAAGAATTTCAGTGTGATCAATGTGATAACTCGTTTGGCACGAAACCTGCGCTAACTCAGCATTTAAGAGCACATAAAGATGTCCAGATTGACAATACAACGAATTCCGACAATATAAGGCGTCTAAGGAAAAGACCTACCTCTGAAATCAAAGCGACTAAAGTTACGGAAACAAGAAAAGATCGCAAGTCGAGCGAAGCTAACTTAAACGTTCAAGGAAGAATCGAAAATATACCTTCCAATCCAGATGATCAACGTTTTATGTACAAACACAAGGCCAATATAAAGGCTATATTACAAAATTCTAACGCGACACTCATTAAAACATACGGGAGAGACGGATATTCATGCAATTTCTGCGACTTTCAGGCCGAAAAACCTTTTGTACTAAAGCGGCATAATCTGAAGAAACACACCGATGTAGGAGACGAGGCCATCAAAACAAAATATGTATCAGATTTGATCTTAAAATTAGACACAACAGATTTTAAGTGCAAGTTATGCAAAGAACCAATGAACACTTTAGAAGAATTCATGGGACATCTTAGTAAAATACACTCCAAACTTATTTACACTGACGTCAAAAACTATATCATTCCTTTCAAATTCGATTCCGACGATTTTCGATGCTTCATGTGTGATAAAAATTTCAAGTATTTCAAGCTCCTCTCCGAACATATGACTGAACATTACCGGAACTTCGACTGTCCTGATTGCGATCGTAGTTTCATCAATAAACAGGCTATGCAGTCGCACACTTATAGACACAACAGGGGGATTTTCAAATGCTCTTATTGCTCCAAAGAGTTTGATTCTCGGCCGAAAAGAGCCGACCATGAAAGAGCCGTGCATATGGCCGGCAGGTATAGGAAATGTGCGTACTGTGACCGACGACTCCCGACATGGGATGCCGTACTTGACCATGAGCTCAAGGCCCACGGGGTAGCGAAACCCCAACACACATGCGAAGATTGTGGAAAGACTTATAGCAAACAAAGTGGTTTAACAATGCATAAAAATCGCTTCCATCTCTTTAAGAAACCTCACAAGTGTTCCTCTTGCGAGATGGCTTTTTGCACGAACGTGGAGTTGAACTATCATGTTATAACTCATACGAAAACGAGGAATCATAGCTATGTCCAGATTGACAATACAACGAAATCCAAATTGGAACGATCTAAAAAGAAACCGAGGACAAAGCCAACCATGTTTAAAACCAAAGCATCTTTTTTGGATGAAAAAACTAAAAAACTTATCGAGCTGAATAAATTAAAAGCGAAAAAGTTAACAAAACCGGTAATAACCACAGTAACAGACGATGAAATAAATCTTACCGAAACAAAAGTAATTTCTATAGAGATTAATATGGAGCCGAAGATAGAAGGAATGGAGGTTCCTGTGAACGCCGATCAAGTCCGAACGCGGTACAAGGCTATAGTCAACGACAAATTCAAGAAAGAAAATAAAGAGCCCGAAAAATTCGAAGTCAACGAAATGAATAAACATAAAGACAATATAACGACTTTATTACAAAATTCTAACGCGACAATCATCAAAGGATTTTGGGGAACTGGTTATTCTTGTAACTTTTGTCACGAACAGAGAGAAATACCTTCAGAATTAAAACTGCATAATTTAGAAGCTCATAGCAATGTTGCAGACGAAGCTATCAAAGTAAAATACGTATCAGATTTAGTTATAAGACTCGACATTACAGATCTCAAATGCAAACTATGCAACTCAAGTGTAAACTCTTTAGAAGACTTTACGACACATCTAACAAAAATACATTCAAAAATTTTACATACCGATATTAAAAACCACATCGTTCCGTTTAAATTCAACACGGATATCTTACAATGTTGTATGTGTAAGAAAGAATTCAAGTATTTCAAACTCCTTTCAGAGCATATGACTGAACATTATAGAAACTACGAATGCCCTGTTTGCGAGCGTGCGTTCATAAACAAACAATCAATGCAAACCCACAGTTATAGACACAACAAAGGTGTCTTCAAATGCTCACACTGCCCGAAAGTTTTCGACTCTAAACCGAAAAGAAGCGTGCATGAGAGAGTAGTACACGCTTTGTCCAACAAGACGCGAAAATGTTCCTTATGTAGCGAAAGATTTGCGACGAAAGACTTGGTTCAAAGCCATGAGGTCAAAGCCCATGGGGTAACACCAACAGTCTTTTCCTGTCAAGCTTGCAACAAGTCTTACCACAGCCAGAGTTCGCTGAGGACGCATAGAAAGCGCTACCATTTAATGTTGAGACCACACAAATGCTCGTATTGCGACATGGCATTTTTCTCCAAGATCGAGTTGCGTTCCCATACGGTAACACATACAAAATCAAGGGATTTCAAGTGTGATATGTGTACGAAATCTTTTGGGACTCGGTGTAGTCTTAATCAGCATGTTAGGGGACATTTAGATGATAGGAGATTTAAATGTGACAGTTGTGAAAGAACGTTTGTTCATAGGACAGCTTGGAAAGTGCATATGAGGAGTAAACATAGTAGGATCGTTTAG
- Protein Sequence
- MSVEKAEIETFFGRCRCCLSYGYLKNMWAEHQFEGEAEIYGEMLVQCFALTWDHSEDSMEQDQICEQCIFRLRDASDFKRVVLDSQAELFQQIDAENEMSIKEERLDEEYLIEYNPPPPDSEDTGDTMYADTEYAMDIVDTVMSVKDETEYEEVEYLEEEDASGANDAVDTDSSQPTDRLRPVKRRKQPRKQDTDDEEAPKRKWPRKLPKSERHRTYKQYSELDLRTCLEEVRNNELTAAEAALKYDIPKKTICAKIKMDPNDVRTDIQNSINNTTTRETVTTSQLEVPILSHEDIIQTDTDTESQEVANKYHPLLHEAAKVTGSDTESLEVPNKFQVSHEEPKVTDSVTESQEVPNKYQLSHKEPKETESKAESQEVPIKYPILDEEAKKTNSDTESQGEVPNKFQMLKHKNNLKMILKYSNATLIKGNSAAGYSCWFCYKHFSPEKLKKHNFQHGDVYDDAIKVKYVSDLIIKLDVTGLKCRLCEEKIHSLEQLMVHFQENHNKTIYTDIDNHLIPFKFDTDKLQCVICAAEFKYFKLLSEHMCEHYSNYNCPECDRVFINKQSMQTHRYRHKKGEYKCSQCPKIFDSPMKIREHEYVTHKLSNKKRKCGFCDEKFSSADLVKNHEAENHGVARSRLNCEACNRPFATQKTLAVHKKRHHLVMRPLECETCGKGFYTRQELNWHSVTHTKTKEFQCDQCDNSFGTKPALTQHLRAHKDVQIDNTTNSDNIRRLRKRPTSEIKATKVTETRKDRKSSEANLNVQGRIENIPSNPDDQRFMYKHKANIKAILQNSNATLIKTYGRDGYSCNFCDFQAEKPFVLKRHNLKKHTDVGDEAIKTKYVSDLILKLDTTDFKCKLCKEPMNTLEEFMGHLSKIHSKLIYTDVKNYIIPFKFDSDDFRCFMCDKNFKYFKLLSEHMTEHYRNFDCPDCDRSFINKQAMQSHTYRHNRGIFKCSYCSKEFDSRPKRADHERAVHMAGRYRKCAYCDRRLPTWDAVLDHELKAHGVAKPQHTCEDCGKTYSKQSGLTMHKNRFHLFKKPHKCSSCEMAFCTNVELNYHVITHTKTRNHSYVQIDNTTKSKLERSKKKPRTKPTMFKTKASFLDEKTKKLIELNKLKAKKLTKPVITTVTDDEINLTETKVISIEINMEPKIEGMEVPVNADQVRTRYKAIVNDKFKKENKEPEKFEVNEMNKHKDNITTLLQNSNATIIKGFWGTGYSCNFCHEQREIPSELKLHNLEAHSNVADEAIKVKYVSDLVIRLDITDLKCKLCNSSVNSLEDFTTHLTKIHSKILHTDIKNHIVPFKFNTDILQCCMCKKEFKYFKLLSEHMTEHYRNYECPVCERAFINKQSMQTHSYRHNKGVFKCSHCPKVFDSKPKRSVHERVVHALSNKTRKCSLCSERFATKDLVQSHEVKAHGVTPTVFSCQACNKSYHSQSSLRTHRKRYHLMLRPHKCSYCDMAFFSKIELRSHTVTHTKSRDFKCDMCTKSFGTRCSLNQHVRGHLDDRRFKCDSCERTFVHRTAWKVHMRSKHSRIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -