Olat004820.1
Basic Information
- Insect
- Oligia latruncula
- Gene Symbol
- -
- Assembly
- GCA_948474745.1
- Location
- OX419706.1:10881684-10882538[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-08 1.4e-05 25.1 0.0 5 38 2 36 1 41 0.87
Sequence Information
- Coding Sequence
- ATGATAGAATTGGCTGTAGAAGCATTAAGAAAGAAAACAATGTCTTCCTACGAAGCACAAAGAACTTTTGGCATACCTCGTCGAACTTTATTGGACAAGCTACATAATAAACACCCTAAAAGTCCAGGATGCCCAACTCGGCTAACTGATGAGGAGGAAGCTAATATAAAAAGAGTGTTAATTGCAGCCGCCGAATATGGCAGTCCTTTGACCCTCCTGGATTTGCGAATTGTCGTACATAGATATTTGGAGGTTAATGGAAGACTTTCCATTTTTAATAACAAGTTACCCGGAAAGAAGTGGGCATACACTTTTGTAAAACGAAATAAATCAGACTTAACCTACAGAGTGATCCAAAATATAAAAAGAAGCCGTGCAGAAAAATCCCCTGATGAAATGGATGAATATTTCAAAAATCTGAAGCTATCACTGGAAGGAATCTCTAATGAGAACATTTTAAATTACGACGAGACAAATTTAACCGATAATCCTGGGGCTCAAAAATGTTTGTTCAGAAGAGGAATCAAGTACCCCGAAAGGGTGTTAAATTATACGAAGGGGGCTGTATCTATAATGTTCGCAATAACTGCAGGAGGAGAATGTCTTGCTCCATACGTTGTGTATAAAGCTGAGCACTTATATACACAATGGACACTGAACGGACCTAAAGGATCCAGATTCAACCGTTCTAAATCGGGATGGTGTTCTATTCGAAGATTGGTTTGA
- Protein Sequence
- MIELAVEALRKKTMSSYEAQRTFGIPRRTLLDKLHNKHPKSPGCPTRLTDEEEANIKRVLIAAAEYGSPLTLLDLRIVVHRYLEVNGRLSIFNNKLPGKKWAYTFVKRNKSDLTYRVIQNIKRSRAEKSPDEMDEYFKNLKLSLEGISNENILNYDETNLTDNPGAQKCLFRRGIKYPERVLNYTKGAVSIMFAITAGGECLAPYVVYKAEHLYTQWTLNGPKGSRFNRSKSGWCSIRRLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01076437;
- 90% Identity
- iTF_01076437;
- 80% Identity
- -