Olat001071.1
Basic Information
- Insect
- Oligia latruncula
- Gene Symbol
- -
- Assembly
- GCA_948474745.1
- Location
- OX419692.1:14263830-14264412[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-08 1.1e-05 25.4 0.0 4 34 48 78 45 88 0.91 2 2 7.4 5.2e+03 -2.4 0.0 16 24 146 154 144 155 0.80
Sequence Information
- Coding Sequence
- ATGCCAGCCTGGTTAAGCAGACGACATCCTCACTCGTTAAACTGCGAGATGCTATTATTAAAAGAAAAATACTGGCGCTATTTGATGTTGGACACATATCAAGACGACCAGAAAAGAAGATACAGAAAGGACTCGGAGTTTGATCTCAAAAGGGCCGTTGAAAGTGTTTTGAGTTCGTCAATGACGGTTTACAAAGCTTCTAAAGTATATAAAATTCCATGGACCACATTAAAACAGAGTATAAGCAAGGCAACTCTACGAGAGAGCAATGCAGATGCGCAGATTGTGTTGCTCATGATGGGACGGCCGTTTGCGTTACCTATGGAATTAGAACAAAAGTTCTTGGCCTACATTATTAAGATGCAAGAAATTGGTTTTGTTCTGCCAGTAACTCAAATAAGGCAAATTGTCAAATTATTATTACTGGCAAATTGCAAATTATCTTTGGCAAAAGCTACGAATATAAGCGGCTCATACAGCGATGAAAAAGGGATCTACAGGCTGGCTGGTGGGTAA
- Protein Sequence
- MPAWLSRRHPHSLNCEMLLLKEKYWRYLMLDTYQDDQKRRYRKDSEFDLKRAVESVLSSSMTVYKASKVYKIPWTTLKQSISKATLRESNADAQIVLLMMGRPFALPMELEQKFLAYIIKMQEIGFVLPVTQIRQIVKLLLLANCKLSLAKATNISGSYSDEKGIYRLAGG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -