Olat004804.1
Basic Information
- Insect
- Oligia latruncula
- Gene Symbol
- -
- Assembly
- GCA_948474745.1
- Location
- OX419706.1:10796705-10797993[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-09 9.4e-07 28.8 0.3 6 43 2 39 1 41 0.88 2 2 6.1 4.2e+03 -2.1 0.0 27 38 110 121 110 124 0.73
Sequence Information
- Coding Sequence
- ATGAGAGACGCAATTGCAGCCGTTCGTAGCCAGAGAATGGGTTGGCAGATGGCAGCAAAGGCATACCACGTTCCCGCTACTACGCTCCGACGTCGAGCAGAAAAAGGAGAAACGTCTAAAGGGTACTTAGGTGGGCATAAAGCTACATTTAATTCAGAACTCGAAAGACAAAATATTACTGGAGAATGGATGTTTGCGCCTGCAGATGTCACTGACAATGATCTTGGAGATGCTTCTGTACCTATCTTGCCAGACAATGCCAGAAATGAGGAATCTCAGGATCTCCAGCTGAACAACCACGGCGAGGCGCCACCTTTAGATGACCCAGACCTCCCCGCCCGAACGATCAGACTGAGGAAGAGCCTCCAGTACCTCAGATAA
- Protein Sequence
- MRDAIAAVRSQRMGWQMAAKAYHVPATTLRRRAEKGETSKGYLGGHKATFNSELERQNITGEWMFAPADVTDNDLGDASVPILPDNARNEESQDLQLNNHGEAPPLDDPDLPARTIRLRKSLQYLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -