Olat016274.1
Basic Information
- Insect
- Oligia latruncula
- Gene Symbol
- ttk
- Assembly
- GCA_948474745.1
- Location
- OX419683.1:24080459-24093276[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-16 3.8e-13 49.2 0.0 1 42 329 371 329 374 0.94
Sequence Information
- Coding Sequence
- ATGGCGCAGCAGTACAGCTTGCGCTGGAACAACCACCAGCCCAACTTCATCTCGCAGTTCACTTCGCTCCTGAACACCCAGACGCTTGTCGATGTCACGCTATCTGCTGACGGGGTGCAGTTACTGGCACACAAGGTGGTCCTGTCCGCGTGCAGTACCTATTTCCAAACCCTGTTCGTCGATCATCCGGCATCACATCCTATTGTGATCCTGAAAGATGTCACCTACCCCGATCTACGTGCGCTGGTGGACTTCATGTACTGCGGCCAGATTAACGTGACTGAGGAGGAGTTGCCGCAGGTGCTCGCCACCGCCAAGCTCCTGAAGATCAAAGGTCTGCACGAGATGCCGGACTCCACCTCCCTGTTGCGTTCACATGGTACGGTGTCAGAGTTTCAAAACCAGGGGGACTCAGTCGACTCAGCGCGTGACTCGCCGGCAACGTCGCCTTCCAGTAGACGCAGGAGGCGCCGAAGAAGTTCAGCGGGCTCGACGCAACTCAATGTAGTCGAGAACGAACATGGCCGCGCAGACGTGAGTGCTCAGACCGTGGAGGCGATCACACTGAGCAGCGTGAGCAGCGTGCCGCAACAACGACGCGTGCGCGAGTACCACGAGATCCGGACCATCGACAACTCACAACAGGTAGACGATACGACAGAACCAGAAAATATGAACGTGGAGCCCATCGGAATAGATAACACGACTCCGGTAGCCCTGCCCGCAGGAGGCCAGTGGACCATGATGGAGCACTCGTATCCACGGTACACGAATGCGTGCATAGGTGCCGGCGCGCTACAGCAGGACCCCGGCATGTACATCAACAACGTCATCAACAACCCGCAAATGGACGCCGATCTCAACTACGCGCAGGGCCTGGGCGTGGCTGGCCCCTCGCCCGGCTCCTCCTGCGTCGACGTGCAGGCCTCCGCCGAGCCCAACCCGCCCCCTGCCCCGAAGCGGCGCCGCACTACCAACCCGCAGTCCGAAGAGAACTTCCAGCGTGCGCTCGAGGCCGTGCGCTTCGGGGGCATCGGGTTCTGCAAAGCGGCGCGCATGTTCGGCGTCAACAACCGCACGCTCTGGCTAGAGTACAAGAAGAAAGGCTATCCCAACAACCGGCCAAGCATCAAGAGCAGGATCAAGCGCGAGCACACGACACCGCCGCCCGAGCATAAGGACGAGTCGGCGCAGCCTGAGCAGCAGATGGCGCTGCTGTGCCCGCAGCATCAGGTGCCGCCCGGTTTCCTCGAGCCCGGCGCGGCGCACGGCTTTCCATTGCAGAGTGTGGCACACAACTCGCCTCTCAACCTCCTCGGCGTGAACTTTAACTCGATGCAATAG
- Protein Sequence
- MAQQYSLRWNNHQPNFISQFTSLLNTQTLVDVTLSADGVQLLAHKVVLSACSTYFQTLFVDHPASHPIVILKDVTYPDLRALVDFMYCGQINVTEEELPQVLATAKLLKIKGLHEMPDSTSLLRSHGTVSEFQNQGDSVDSARDSPATSPSSRRRRRRRSSAGSTQLNVVENEHGRADVSAQTVEAITLSSVSSVPQQRRVREYHEIRTIDNSQQVDDTTEPENMNVEPIGIDNTTPVALPAGGQWTMMEHSYPRYTNACIGAGALQQDPGMYINNVINNPQMDADLNYAQGLGVAGPSPGSSCVDVQASAEPNPPPAPKRRRTTNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPEHKDESAQPEQQMALLCPQHQVPPGFLEPGAAHGFPLQSVAHNSPLNLLGVNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01247249;
- 90% Identity
- iTF_00036545;
- 80% Identity
- iTF_01094182;