Ofas030191.1
Basic Information
- Insect
- Oligia fasciuncula
- Gene Symbol
- -
- Assembly
- GCA_963082905.1
- Location
- OY720415.1:1577797-1607063[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.35 32 6.2 0.3 1 23 960 983 960 983 0.95 2 12 0.0094 0.85 11.1 1.2 1 23 991 1013 991 1013 0.95 3 12 1.3 1.1e+02 4.4 1.4 1 23 1017 1039 1017 1039 0.93 4 12 0.00055 0.05 15.0 0.7 1 20 1046 1065 1046 1067 0.94 5 12 0.012 1.1 10.8 1.0 2 21 1074 1093 1074 1094 0.92 6 12 0.00071 0.064 14.7 0.6 2 23 1110 1131 1109 1131 0.93 7 12 0.0011 0.1 14.0 1.0 1 23 1136 1158 1136 1158 0.97 8 12 0.0038 0.35 12.4 4.3 1 21 1167 1187 1167 1192 0.93 9 12 8.2e-05 0.0075 17.6 2.2 1 23 1200 1223 1200 1223 0.93 10 12 0.013 1.2 10.7 0.4 1 23 1229 1252 1229 1252 0.94 11 12 0.043 3.9 9.0 0.3 3 19 1265 1281 1263 1282 0.89 12 12 0.08 7.2 8.2 1.0 1 23 1295 1318 1295 1318 0.97
Sequence Information
- Coding Sequence
- ATGAAGGAAGTTAACATAAACATTGAAGGCTATAATGTTAACGGGATATGTGTCGGCTGTTTAAACTACAATCGTCAAATGTCTTACCACCCCTTCATCAAAGAATGTTTTCGTTTGCTCGGAAATATCGATGTGCCAGATGGTCTGGAAGTCCAGGTGTGTTGGGAGTGCCTGGCGCGCGTCAAATCTGTTATCAACTTCAAGGAACAGATACTAAAGTCTTACGACTTCCTTATCTCGTACTCTAAGGAGCACACATTCCTGGAGTCTCCTGATGACTTCGGCCCTCACGCCACCATCAATATGGAGTGGACAGGAGTGGAGTGTTTCGAGTGTTGGCCACAAGTAGAAGTAGTGGAGGATGATGAGATAGCCGTTGATGTTAAAAAAGAGGAGGAGATTGAGAATAAGTATTTTGAGGTGGCTTTAAAAGAAGAAACTTTTGACGACCCATACTTCCAAGATATGCCTACTGTTGACAATGATATCACATCAGATGAAGACGTGCAGCTTTCTAAACTAAAAGAGAACGAGACGGAGAAAGGGAAGAAGAAGAGAAAGAGTGAGAAGAAGAAGGAACGGGAGGGAGATCGGATGCCTGCGAACAAACGGCCGAGAAAGACAACACGAGGTCTCTATGACATAGCACAATTTGAAGCTGCATATGACCAAATTGTCAACCACGGGGTGTCCGTACGACAAGCAGCCAAAATGTTCGATATCACACACGTCACTCTTCAAAGGTACAAGAAGCGGCGTCAAACCACAAATTTTCCTGTCAAAGTCGGTTATGCACGGAACAGTTTTTATACAGCAGACCAGGAAACTCTCCTAACGAAATACTTGAAACAATACGCGGAGATATTTCCCGGGTTATGCGTGAGGGTAGTCAGAAAGTATGCAACGGAATTCAGTCAGAAGCTGGGTTTGAAAACTCCGAAGTCTTGGGTTGACAATGAAATGGCTGGCATCGATTGGTACAAGAACTTCATGTACAGGAATAAAGCGTTAGAAGATAAAATGGATCGGCAATCTGCTAAAGAAAAAGTTAGAGTTTTTTATGATCGGCTGTTTAGTATTTTGTGTCAGTACAATATTGGTTCAGAAAACATTTACTCTTTAGATGAAATAGGAGTTAATATTGAAGAGTTTAGAGATAAAATTTGGTTGATGACGTCGAAAAATGGACCTATAGCTTTGAAAGAGTCTAAAGTTATGTTCACTTACGCAGCGAACGCTAAGGGTTATGTCATAccccctttattttttttaccagcAGAGAAAACAGAAGAAACTCCGAAAAACAACGTCGAAGTCAAAATAGAGAAAGATTTGatgCCTCGAGGAAAGAAGCTTACCTGGTCTCCCCGCAAAATGAGACTCGCTATAGAAGAGGTAAACGCGGGCTCCAAATTACGTAAAACAGCAGAGAAATTTGGAGTACCAGTAATGACTCTCCACGATCACGTAAAAAGAGGTCCTGAATATAAACCCAGACTAGGGGGCAAGCCTGTTTTTACTACTGAGCAAGAAGTAGAGATCCGTGATGAGCTGATCAAGTTATCTAAAATGTTTTATGGGTTAACACCGCAAGCATTACGAAGAGGTGTTTATCAGTAtgctgaaagaaataaaattaagcacCCATTTAACAGAGAAAAGGAAGAAGCCGGAAAGGACTGGTTTTATGGTTTCCTAAAACGCAACCCAGAAATCAGCGTCCGAGTACCTGAAGCTACCAGCGTAAGCAGGATCACTGCTTTCAATCAAACGGAAATGGAGTTATTTTTCAAGAACTTAATTCACTTACTTGAAAATCATACCATACTTCCACACAGAATGTTTAATGTCGATGAATCGGGCGTAACAACTGTGCATAAGCCAGGAAAAATACTTGCACCAAAGGGTCAAAAACTAGTCGGTGCTGCTACAAGTTGGGAAAGGGGCAAGAACATCACAGTCTGTTGTTGCATGAGCGCCACAGGCCAATTCATTCCACCGTTATTTATTTTCCCGCGCATTCGAATGACACCAGCATTAGAAAGAGGTGGTCCTCCAGGTTCAATATACAGGTGCTCAAAATCAGGATGGATGATTGAGGAACTGTTCTTGGATTGGCTGAAGCACTTCGTTGAACACACCAAGCCAACTTTGGAGGATGTCGTGCTCCTGGTTCTAGACAATCACTGCGCTGCACCTATAGAGATTCTTCACACTGATCAGTGCGCTGCACCTATAAAGATTCTTCACACTGATCAGTGCGCTGCACCTATAGAGATTCTTCACACTGATCAGTGCGCTGCACCTATAGAGATTCTTCACACTGATCAGTGCGCTGCACCTATAAAGATTCTTCACACTGATCAGTGCGCTGCACCTATAAAGATTCTTCACACTGATCAGTGCGCTGCACCTATAGAGATTCTGCACACTGATCAGTGCGCTGCACCTATAAAGATTCTTCACACTGATCAGTGCGCTGCACCTATAGAGATTCTTCACACTGATCAGGTTGTATCAGGAATAACCAGCAGAGAAGATATTAAGCTAATACCCTCAACTAGTGGAACCTCAAAGCAAATAACGCAGGAAGAAACAGAATCAGATGATCTCGGAAAAGACAAAGAGGATGTCCATGTTTCTTTTGGTGAATGTTCAATGGGTCTGCCGCTGAAACAAGGCTCTGAGAGGAAAAGGAAGACAGCAGTGGTCTACCCAAAGCTCCAGAAGACTAAGAAGGACAAATACCCCGACAAAAAGAGTAGGAAGCTAAAGAATCTTCCAGAAGAACTTGTAGAATTGTACACTATGAGTAAAGAAGAGATGTGGGGCACCAGAATTGAGGATCTTAACAGCAAGGAGTTTCAGAAgcttaaatatagGTGTAAAGATTGCATAATTGCCTTCAACACTGAGAAGTTGATGCTTGACCATCTAAATGGAAAACACCAACCGAAAACCGAAGACTGCCATCAATGCTCAATCTGCCATGCCTATTTCATAACTAAGGACAACGTGGCCGCGCACAAGGCGTTACATCTACAGGGATACAAGTGTCGTGAGTGTGGTTTCAATACTACGCTCAAACGACGTATGTTGAAACATGTTGGGAGTCACGCGCCGGGTGGGGGTGTTCATGTGTGCCAGACTTGTGGTACTGGCTTTAGCACAAAATCGAAGCTAACATACCACCGCGTCGTGTGTTGTCAAGAAAAGCCACAATGTGACTGCTGTGGAAAAGTATTCGCCAACAAAATGACGCTGAAATACCACCTTAAAATCCTGCCTAAGAATAAAGATGATAAGCCTAAGGAGAAGTTGTACATACCGTGCAAGGGATGCGATAAAGTGTTCCATTCGAAGAAGAGCTATAGAGCGCATGCTGTAATCCACGACGGCGTAACCCACCCGTGCCCAATCTGCGGCAAACTGTTCCAATGGAAGCGCAACCTGGCGCGACACACGCGCAACCATCGCGAGCGGCAGGCGGGCAACTTGCACGAGTGCCGCGCTTGCGGCAAGACCTTCGCGAGCAGGGACTGCTTTAACAACCACATGCGGCTCAGCAAGAAGCACGTGTCCCAGGATACTTTCCCACACGAATGTAACTACTGCGGAAAGAAATTCGCTTCAAAATGGTGCCTGACCGACCACATCGACTGGGACCACTTGAAGAAAATCAAATACCAATGTTCCTTTTGTTTTAAGGCATTTAAAACGGCTAAAATATTGGTGGCTCATGTCAATAATATCCATGAGGGAAAGAAAAAAGAAGCGGAGGGTGAACATCTATGCGAAATATGTGGGAAATCATACCGGACAGTGAAACGTCTAAAGGGCCACGTATGGGCGATGCACACAAAACGAGCAAgcagcaaaatatttaaatgtaagcTGTGTCCGGCGACGTTCATGTGGCAGACCAGCGTATACAAGCATATGAAGATGATGCACGACAATAATAAGAAGAGCAAGaCACCGCGCGCTGCCCAACCTGTGAAGAAAGAAGAGCcctacccgggaatcgaactagCGAACCGCATGCAGTACTTCCAACAAAACATTGGCGGCAACTTTAATATAGTTCACATACAGCCTTTGCCAGTAACTCAGAATATTGTATAA
- Protein Sequence
- MKEVNINIEGYNVNGICVGCLNYNRQMSYHPFIKECFRLLGNIDVPDGLEVQVCWECLARVKSVINFKEQILKSYDFLISYSKEHTFLESPDDFGPHATINMEWTGVECFECWPQVEVVEDDEIAVDVKKEEEIENKYFEVALKEETFDDPYFQDMPTVDNDITSDEDVQLSKLKENETEKGKKKRKSEKKKEREGDRMPANKRPRKTTRGLYDIAQFEAAYDQIVNHGVSVRQAAKMFDITHVTLQRYKKRRQTTNFPVKVGYARNSFYTADQETLLTKYLKQYAEIFPGLCVRVVRKYATEFSQKLGLKTPKSWVDNEMAGIDWYKNFMYRNKALEDKMDRQSAKEKVRVFYDRLFSILCQYNIGSENIYSLDEIGVNIEEFRDKIWLMTSKNGPIALKESKVMFTYAANAKGYVIPPLFFLPAEKTEETPKNNVEVKIEKDLMPRGKKLTWSPRKMRLAIEEVNAGSKLRKTAEKFGVPVMTLHDHVKRGPEYKPRLGGKPVFTTEQEVEIRDELIKLSKMFYGLTPQALRRGVYQYAERNKIKHPFNREKEEAGKDWFYGFLKRNPEISVRVPEATSVSRITAFNQTEMELFFKNLIHLLENHTILPHRMFNVDESGVTTVHKPGKILAPKGQKLVGAATSWERGKNITVCCCMSATGQFIPPLFIFPRIRMTPALERGGPPGSIYRCSKSGWMIEELFLDWLKHFVEHTKPTLEDVVLLVLDNHCAAPIEILHTDQCAAPIKILHTDQCAAPIEILHTDQCAAPIEILHTDQCAAPIKILHTDQCAAPIKILHTDQCAAPIEILHTDQCAAPIKILHTDQCAAPIEILHTDQVVSGITSREDIKLIPSTSGTSKQITQEETESDDLGKDKEDVHVSFGECSMGLPLKQGSERKRKTAVVYPKLQKTKKDKYPDKKSRKLKNLPEELVELYTMSKEEMWGTRIEDLNSKEFQKLKYRCKDCIIAFNTEKLMLDHLNGKHQPKTEDCHQCSICHAYFITKDNVAAHKALHLQGYKCRECGFNTTLKRRMLKHVGSHAPGGGVHVCQTCGTGFSTKSKLTYHRVVCCQEKPQCDCCGKVFANKMTLKYHLKILPKNKDDKPKEKLYIPCKGCDKVFHSKKSYRAHAVIHDGVTHPCPICGKLFQWKRNLARHTRNHRERQAGNLHECRACGKTFASRDCFNNHMRLSKKHVSQDTFPHECNYCGKKFASKWCLTDHIDWDHLKKIKYQCSFCFKAFKTAKILVAHVNNIHEGKKKEAEGEHLCEICGKSYRTVKRLKGHVWAMHTKRASSKIFKCKLCPATFMWQTSVYKHMKMMHDNNKKSKTPRAAQPVKKEEPYPGIELANRMQYFQQNIGGNFNIVHIQPLPVTQNIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01092995;
- 90% Identity
- iTF_01092995;
- 80% Identity
- iTF_01092995;