Basic Information

Insect: Oligia fasciuncula
Gene Symbol: -
Assembly: GCA_963082905.1
Location: OY720405.1:7777357-7793717[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.33 30 6.3 0.4 6 20 12 26 6 28 0.86

2 13 0.032 2.9 9.5 0.4 2 20 34 52 33 54 0.93

3 13 0.79 72 5.1 0.5 1 12 213 224 213 233 0.83

4 13 4.8 4.3e+02 2.6 0.1 1 19 371 389 371 389 0.96

5 13 0.00024 0.022 16.1 0.4 1 23 396 418 396 418 0.98

6 13 0.0004 0.037 15.4 0.6 1 23 432 454 432 454 0.97

7 13 2.9e-05 0.0027 19.0 0.7 3 23 508 528 506 528 0.96

8 13 0.00088 0.08 14.4 2.3 1 23 544 566 544 566 0.98

9 13 1.6e-06 0.00015 23.0 4.5 1 23 572 594 572 594 0.98

10 13 0.00059 0.054 14.9 5.2 1 23 600 622 600 622 0.97

11 13 1e-05 0.00092 20.5 0.4 1 23 628 650 628 650 0.98

12 13 0.00049 0.044 15.2 1.1 1 23 654 676 654 676 0.98

13 13 0.00022 0.02 16.3 0.1 1 23 684 707 684 707 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.33	30	6.3	0.4	6	20	12	26	6	28	0.86
2	13	0.032	2.9	9.5	0.4	2	20	34	52	33	54	0.93
3	13	0.79	72	5.1	0.5	1	12	213	224	213	233	0.83
4	13	4.8	4.3e+02	2.6	0.1	1	19	371	389	371	389	0.96
5	13	0.00024	0.022	16.1	0.4	1	23	396	418	396	418	0.98
6	13	0.0004	0.037	15.4	0.6	1	23	432	454	432	454	0.97
7	13	2.9e-05	0.0027	19.0	0.7	3	23	508	528	506	528	0.96
8	13	0.00088	0.08	14.4	2.3	1	23	544	566	544	566	0.98
9	13	1.6e-06	0.00015	23.0	4.5	1	23	572	594	572	594	0.98
10	13	0.00059	0.054	14.9	5.2	1	23	600	622	600	622	0.97
11	13	1e-05	0.00092	20.5	0.4	1	23	628	650	628	650	0.98
12	13	0.00049	0.044	15.2	1.1	1	23	654	676	654	676	0.98
13	13	0.00022	0.02	16.3	0.1	1	23	684	707	684	707	0.96

Sequence Information

Coding Sequence: ATGGGAGGCCAGCCGTTGAATTGCCCCGTTTGTTGCAATGCGACTTTTAGTTCTAAACAATCTCTAATTGAGCACTTAACTAATGTTTTAGAGAATGTCTATTGTCCTGTTTGTAATTACAAATGTACCTCATTACCACACCTTGTAGAGCATTTGGCTCAGGATAATTGTCAGCCAACTAATAATGTTCATACCATTATATTTGAGCCCCGATCAGATGAGGAGAACATTGAAAACTCAACAGATAATGGAAATTCTGAACTTAAAGTATTTCAGAGTGAATTAAATACTAATTATGGGAGTCACTATACAGCCAACCAAACTTACGAAACTGAGGTGGCCCTAAATGAtgccaacaaaatgtatgtgGAATTGTTTAGCAAGCAGTTGAAACCATGCCTTCAAACACGAGAATTTAAACTGGTGAAGGAAAATGGGGAGAGCCGGTACATGATTGTCAGTCAGGATGATACCGACTTGAATGGTGGAAACACTATTGTAACTAAACAAAATGTTGATGGAACTATATCACTGACTACTGTTAAAGATATGCATCTGCAGTCGGAGAACATAATTACACCAGACAATGTACATGAAACTCAGGAGGATAACCAGGAAGATTGTCAAGAGGAGATCTACAGCTGCAACACTTGCAAAGTGTCATTCTCATCTGTTATAGAGCACATACAGAACTACCATAATGACCAGGATGTTGTTGTCGAGGAGCCAATGGAAGAGGGGCAGACTGAGTCAGTGCCTGAATACGAGCCAACGGAGAATGAAGACACGTTGGTGACCACAGACAAGCAGACACCTCGGCGAGTCATCACTGACACGGGCGATATTGTAGAGGAGCCACTCATGTTTAAATCTGGGGATCAAATTATTTCGCCGGATCCATTGAACTTGGagCAAACGCCAGAACCAAATAAAGCGGAGGGAAAAGGTCTGCGCGTCGTCACGAAACGTTTTCTGCAAGTAGACAAACTCTGCGACAGTGTCATCAAAGATACCATCCAGGCTGACGCAAAAAGTACAGATAAAAGCGGTCCGTTTCACAAGGTTATCGTCAAAGAGGTGCCAAGGGACAACGGGTTTGCAATCAAAATGTACCAATGCTTAGCCTGTGACATATCTGTCTTCAATTTGGATGAGTTCAAAATACATCCATGTAAagtattaaaataCCCGTGTCTTTACTGTCCTGTGGCGTATGAAAACTCGAAATCTCTGTGTGCACACATGAAAGCACACAAAGTGAAAACAGaatctgTCGTCCCTCTGCCTGTAAGATACGAATGTATTATATGCAGCACTGTTTTCCCAACCAACAAATCTTTGAAACTACACAGACGGATGCACGATCCAGTCAAATCACGTCCCATAGATCCTCCGGTAGAAAACACAGACGGTTCAGAAGTGAACGAAGACAGATACCTATGTAGTTTCTGCAACAAAATGATCCCTATTGACTACAGAACTATCCATCAGAACTCACACAAAACCTCGCAGAAAATGAACTGCGGAATTTGTAATAAGAAGTTCACATCTAAAGAGTATCTTGAAATGCATACGAATgtacataatgtggataagGCGCCAATGAACAAACAAGATAAGAATCTACCATACAGCTGTTTGTATTGTAACAGAAGGTTTGCGAGGCCGCACGAAAAAGTGAAACATGAAAGGATACATACAGGTGAGAAGCCCCATTCGTGCGAAATCTGTGGCAAGTCGTTCCGTGTCTCGTACTGCCTCACCCTGCACATGCGCACGCACACCGGCGCGCGCCCGTACGCCTGCCCGCACTGCGGTAAGAGGTTCAAGGCACACAGCGTGTACAACCACCACCTGCTGACGCACTCGGAGGTACGCGCCTACAAGTGCCCATTCTGCCCGAAAGCGTTCAAGACGTCCGTGCAACTCGCCGGGCACAAGAACTCGCATACCAAGCCGTTTTCGTGCCAACATTGTAACAGGCCATTCGCATCCTTATACGCGGTTCGGGTGCACACAGAAACACATGCGCGTCAGAACAACTTGAAATTCTCGTGCGAACTATGCGGCGCGAGCTACGCGAGGGCCTTCGCTCTTAAGGACCACATCAAGCAAGCGCACAATGAACAGGAACAAGCGCAGTCGgTTCCTGGCGATGAAGACTGGTTGACAAAACACAACCCGGATACGGATGAAATACCAGCACTCAATAAAGATTTGACACACGAGATAGACCTGGGAATGTCTACCAACGAACTAATAGTTCCTTAA
Protein Sequence: MGGQPLNCPVCCNATFSSKQSLIEHLTNVLENVYCPVCNYKCTSLPHLVEHLAQDNCQPTNNVHTIIFEPRSDEENIENSTDNGNSELKVFQSELNTNYGSHYTANQTYETEVALNDANKMYVELFSKQLKPCLQTREFKLVKENGESRYMIVSQDDTDLNGGNTIVTKQNVDGTISLTTVKDMHLQSENIITPDNVHETQEDNQEDCQEEIYSCNTCKVSFSSVIEHIQNYHNDQDVVVEEPMEEGQTESVPEYEPTENEDTLVTTDKQTPRRVITDTGDIVEEPLMFKSGDQIISPDPLNLEQTPEPNKAEGKGLRVVTKRFLQVDKLCDSVIKDTIQADAKSTDKSGPFHKVIVKEVPRDNGFAIKMYQCLACDISVFNLDEFKIHPCKVLKYPCLYCPVAYENSKSLCAHMKAHKVKTESVVPLPVRYECIICSTVFPTNKSLKLHRRMHDPVKSRPIDPPVENTDGSEVNEDRYLCSFCNKMIPIDYRTIHQNSHKTSQKMNCGICNKKFTSKEYLEMHTNVHNVDKAPMNKQDKNLPYSCLYCNRRFARPHEKVKHERIHTGEKPHSCEICGKSFRVSYCLTLHMRTHTGARPYACPHCGKRFKAHSVYNHHLLTHSEVRAYKCPFCPKAFKTSVQLAGHKNSHTKPFSCQHCNRPFASLYAVRVHTETHARQNNLKFSCELCGASYARAFALKDHIKQAHNEQEQAQSVPGDEDWLTKHNPDTDEIPALNKDLTHEIDLGMSTNELIVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01440338;
90% Identity: iTF_00123609;
80% Identity: -