Ofas028705.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oligia fasciuncula
Gene Symbol
-
Assembly
GCA_963082905.1
Location
OY720412.1:12042678-12074369[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 8.7 7.8e+02 1.8 1.5 6 15 58 67 55 70 0.76
2 12 1.3 1.2e+02 4.4 0.2 1 23 494 516 494 516 0.95
3 12 0.0031 0.28 12.6 1.7 1 23 529 551 529 551 0.96
4 12 0.00061 0.055 14.9 0.9 1 23 557 579 557 579 0.98
5 12 1.4e-05 0.0012 20.0 2.4 1 23 586 608 586 608 0.99
6 12 2.7e-06 0.00024 22.3 0.4 1 23 614 636 614 636 0.93
7 12 7e-07 6.4e-05 24.1 0.2 1 23 642 664 642 664 0.98
8 12 2.7e-05 0.0024 19.2 2.7 1 23 670 693 670 693 0.96
9 12 0.00058 0.052 14.9 3.2 1 23 699 722 699 722 0.95
10 12 9.2e-05 0.0084 17.4 2.3 2 23 729 750 728 750 0.97
11 12 1.3e-05 0.0012 20.1 1.0 1 23 756 778 756 778 0.97
12 12 0.034 3.1 9.4 0.1 1 23 784 808 784 808 0.93

Sequence Information

Coding Sequence
aTGAACCAGTGTTGCTTTATCTGCAACAACAGGGCTGGCCTCTCCCTAAGAAATGCTTCCAGCCTGTTTGGAGAGCATAACACATTGCAATCAGGCAAGAAAGTATCGGAAGTTGTGAGTGAGATTGTGGGCAAACCGGTGCAAGAGAATAAAGTACATACCAATATACTGTGTAAGAAATGCTTTAAGACATGCTCTGAGTATGATAGCATTCAAGTCAGattacaaacaataaaaactgaTTTAATAGGACAATTCAAATTatccttacataattataatttagactATGAAAACTATGAGCAGAATGTCTCTTCGCCGCCGAAACCCAAACCACTCCTGGGTAAAAAGTTGGTGTTACCAGCATCAAAATTACAACCAATACCACCGGATTTGTTGCTCAAAGTGGGGAAATTGGCACCATTCACCAAATCTAACATGATTTTACCACAGATTAAGCCCTCCACAGCCTCAACATTAAACCTCAAAGTGACCGTTGGATCATCAGTCCTAACACAAACGATAACAACATCAAACAGTAAACCCGTTGAGAAACCTACTTTAGACTCAAATTCCATCCTAACTTCATTCTCCAACGCTTTGAAGGATGACCTAGAAAGTATGGTGACTGTTCAAAGTAATATGAACTCTATGAACCAAAAGAATTCAATATTGAGTTTTAGTGTGAACTCTTTGCCTAAGGATTTTCTTTCTGGCGCCATTTTGAGGAAAATTGAGGAAAAGGATGAGGATTATGAACAGGGGGAGGAGAGGAATGAGGATCATCCTATGGAGATTGATGAAGatTGTTTGTCTGTGGTTCCTGCAACGTCTGCCGATGGTGCAAACTTAGTATTACAAGTTGAAGGATTACAGTCAAAGTGCGATCCTACTGCCGAAGTGAGCGAATACCTAAACCTGCcgacgctagatggcgctgatgaGGAGAGTGACGCACAGAAGTACATCCTCGGCAAGTTGGAGATACTCAACGAGGAGGATgaagacgacgacgacgatgaaGGCCaCACCATAGTGGTAGACAGTGAAAATGGCTCTATTCTGCGAATGGTGGCCGGACAGAAGTTCATATACGAGGGCGGAGAGATATCACTGGTGATGcctgatgatgatgagcagCAAGACGGTGATGGTGACCATCTCGAGAATGGTGATAGTCAAGATTCTAATGATGAATCACAGATCGAGTTACAAGTATCTGGCGACGAGGAAACTGCGAACGCTATCATTGCAGCTGCTCAAGAAcaagGTGGCGCCTTCATTAAGGTAGAGTCTGGCGAGATGTTCCGCGTGAAGTCCGTCTGCAGCGCCGCGCCGCACGACGCGCTGCAGATCGTGGCGCAGGAGGGCAATCTGTTCAAGTGCCTGCTGTGCGAGAAGAGTGATGATACTCCCTCAAGTGTTGAAGACGCAGACACTATGATGCGCCACTTAAAATCAAAGCATGACGCGAGGATATACCTGTGTCGCTTCTGTGGCGCCGTCATGAGGAAACGCACGGAATATGCCACGCATATAGCGTCGCACGCGCACTCAGCGCCGCCCCGCGCGCGGCCCGGCGCGCACCGCTGCGGCGCGTGCGGCAAGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCATCAAGCGCATCTGAAGACTCATGCGGTGCGCCCGCGTCCCTACAAATGCACTCAATGCGGTAAATCGTTCCTCACGCAACAAAATTTGAATCAGCATGAGAAAACACATTCAGGAGTCAAGGATTTCGTCTGTAATATATGCAACAAAGCCTTCAGTACGCAACATAACTTGGAAGTGCACGGCGTGGTACACTCCGGGAACAAGGCGTTTGTGTGCAGCGTGTGCAGCAAAGCGTTCGCGAGGAGAGCAGAGTTGAGGGACCACATGCGGATACACACGGGCGAGCGTCCATTCTCGTGTGACATCTGCGGGTCTCGCTTCACTCAGCGCTCCAACTTACACTCGCACCGCAGAGCGACGCACTTCGACGACAAGCGATACCACTGCTTACAGTGTCCGAAGAAGTTCAAGAGAAGGAGATTACTAGAATACCACATAAAGGCTTCGCACACTGGCGAGCGGCCGCTAAAGTGCGGCATCTGTCACCTGTCGTTCGTGTACCCCGAGCATTACAAGAAACACGTGCGGATACACAGCGGGGAGAGGCCCTATGTCTGTGAGATTTGCGGCAAATCGTTCAACTCCCGCGACAACCGCAACACACACCGCTTCGTGCACAGCGACAAGAAGCCCTACGAGTGCGTCGCGTGCGGCGCCGGGTACATGCGCAAGCAGCTACTGTACGCGCACATGAACACCAGCGGACATCTTGCGGAGTCGATAGTAGTGAATCAACCTAGGGTGATAAAAGTTACTGAAAATGGCACGAATCAACCAGCAGAAATTACACACATAGAAGCGAAAAATAGTAAATTTGATGCGatatttgAATCCAGTGAATTGGAGGCGAGCGTAAAGTCTGTCGTGAAAGCAGAGACGGAAGTGAATCTAGAAGACGCCAAGTTCTACATAACGGAAGATAAGAAGTTAATATTACAAGATAGTGATAAAACAACTTTAAATCTAATACAAGAGGGCGATGAGTCTACATTGCTGACTATAcataatatAGGAGAGAGAGCCGAGGGCACTATACTTGAAGCTGTAGATGCTGATCAACTCGGGGAACAGACTGAGATCGTAGCAAATGACGAAAATGGCGGTATGGTGCGTCTAATACAAATCAAACTGCCGGACGGGAACAACGGATGGGTCGCCATTAACCGCTGA
Protein Sequence
MNQCCFICNNRAGLSLRNASSLFGEHNTLQSGKKVSEVVSEIVGKPVQENKVHTNILCKKCFKTCSEYDSIQVRLQTIKTDLIGQFKLSLHNYNLDYENYEQNVSSPPKPKPLLGKKLVLPASKLQPIPPDLLLKVGKLAPFTKSNMILPQIKPSTASTLNLKVTVGSSVLTQTITTSNSKPVEKPTLDSNSILTSFSNALKDDLESMVTVQSNMNSMNQKNSILSFSVNSLPKDFLSGAILRKIEEKDEDYEQGEERNEDHPMEIDEDCLSVVPATSADGANLVLQVEGLQSKCDPTAEVSEYLNLPTLDGADEESDAQKYILGKLEILNEEDEDDDDDEGHTIVVDSENGSILRMVAGQKFIYEGGEISLVMPDDDEQQDGDGDHLENGDSQDSNDESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMFRVKSVCSAAPHDALQIVAQEGNLFKCLLCEKSDDTPSSVEDADTMMRHLKSKHDARIYLCRFCGAVMRKRTEYATHIASHAHSAPPRARPGAHRCGACGKCYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHAVRPRPYKCTQCGKSFLTQQNLNQHEKTHSGVKDFVCNICNKAFSTQHNLEVHGVVHSGNKAFVCSVCSKAFARRAELRDHMRIHTGERPFSCDICGSRFTQRSNLHSHRRATHFDDKRYHCLQCPKKFKRRRLLEYHIKASHTGERPLKCGICHLSFVYPEHYKKHVRIHSGERPYVCEICGKSFNSRDNRNTHRFVHSDKKPYECVACGAGYMRKQLLYAHMNTSGHLAESIVVNQPRVIKVTENGTNQPAEITHIEAKNSKFDAIFESSELEASVKSVVKAETEVNLEDAKFYITEDKKLILQDSDKTTLNLIQEGDESTLLTIHNIGERAEGTILEAVDADQLGEQTEIVANDENGGMVRLIQIKLPDGNNGWVAINR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01095167;
90% Identity
iTF_00124514;
80% Identity
-