Ofas016733.1
Basic Information
- Insect
- Oligia fasciuncula
- Gene Symbol
- clz9
- Assembly
- GCA_963082905.1
- Location
- OY720400.1:4765567-4766754[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-08 1.1e-05 25.9 0.0 2 37 8 43 7 47 0.89
Sequence Information
- Coding Sequence
- ATGGCTGGCAAACAATACAAGCAAGAGGATATGTTAAAAGCCGTAGAGGCTGTACATCAAGGGGCCTCAACATCAGCTGCAGCAAAGAATTTTAAAGTGCCAAGGACCACCTTGCTTGACAAAATTAAAGGGCGTAGTTCGATCGGCTGCGCTAAAGGACCAGTCTCCATtttaaccaaagaagaagaaaataatttaaagagtTGGTTAATTTCCATGACAAAAAGTCGTTTCCTTGTTACCAAAGATCAGTTGTTTGATAGTGTTAAATTATTAGTTCACGAACTCAACCGTAGTACTCCATTCACAGACAATAGACCAGGTCGACATTGGTTCGAGTCGTTCATAAAGCGCCATCCTGAAGTGGGTCAGATGTTATCTAAGAATTTGACACAATCTCGTGCTTTAGTTGAGGAAGAAAATATTCGTAGCTGGTTTAAACATGTCCAGGACTATTTTACTTCTGCCCAACTTCAAGCAGCTTCTAAAGACCCGCGTAGAATTTTTAACTGCGATGAGAGCGCCCTTTTCTTGTCTCCGACACGTGACAAAGTCTTAACGAAACGTCGCTCCAAAAATGTTTATAACAACATACCTAGTAGTGAAGAAGAGTGCGGAACAGTTCTCGTAACTGCTAACGCGCTGGGTGAATTGGCGCCGCCGATGGTTCTTTTTAAACTAAAGTCAATACCACACGAAATTTCAGAATCAGCACCCAATGATTGGGGATTAGGGCACACAAAAAAGGGCTGGATGACAGGCGAAGCCTTTTACGAATATATAACGAATGTTTTCTACCCTTGGGTTATAAATAGTGGCATCCAGCTaccaattatatttttcttggaCGGTCTTTGCTCATATACAACTCTACCATTGAGCAATTTTTGCCGAGATAAAAAAATAGTACTCATGGCGCTCTACCCAAATGCTACCCATATTCTCCAACCCATGGATGTAGCAGTTTTTAGGCCTTTAAAAGGGATATGGAAAAAAACTGTATATGACTGGCGAAATGAGAATCACTTAGTAAAACTAGGAAATGAAAATTTCTGTCCCTTGTTAGACAAGGCTCTCAAACAATTAGACCAAAATTCCATTGTAAAAGGATTTCACAACTGTGGGCTGTCACCATTTGACGCGAATAACGTCGATTACACTAAATGTGTCACAACACAAGCCAGTTAA
- Protein Sequence
- MAGKQYKQEDMLKAVEAVHQGASTSAAAKNFKVPRTTLLDKIKGRSSIGCAKGPVSILTKEEENNLKSWLISMTKSRFLVTKDQLFDSVKLLVHELNRSTPFTDNRPGRHWFESFIKRHPEVGQMLSKNLTQSRALVEEENIRSWFKHVQDYFTSAQLQAASKDPRRIFNCDESALFLSPTRDKVLTKRRSKNVYNNIPSSEEECGTVLVTANALGELAPPMVLFKLKSIPHEISESAPNDWGLGHTKKGWMTGEAFYEYITNVFYPWVINSGIQLPIIFFLDGLCSYTTLPLSNFCRDKKIVLMALYPNATHILQPMDVAVFRPLKGIWKKTVYDWRNENHLVKLGNENFCPLLDKALKQLDQNSIVKGFHNCGLSPFDANNVDYTKCVTTQAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00667358;
- 90% Identity
- iTF_00071367; iTF_01093974; iTF_00667358;
- 80% Identity
- -