Ofas008137.1
Basic Information
- Insect
- Oligia fasciuncula
- Gene Symbol
- -
- Assembly
- GCA_963082905.1
- Location
- OY720392.1:2835158-2835496[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-09 1.6e-06 28.6 0.1 10 40 24 53 20 56 0.86 2 2 3 1.9e+03 -0.4 0.0 7 14 103 110 102 111 0.87
Sequence Information
- Coding Sequence
- ATGCCCAGACAACGTATCAAAAAAACTTCAAGAGGCGAGTGTGATATAACTCAGTACGAAAATGCGTATGAAGAAGTCAAAAAAGGGACTTCTTTACGAAAAGCTGCAGAGATTTACGGAGTTCACCATTCTTCTCTTCTGCGATACAAGAAAAAAAGAGATGCAGCGATCGAAGAAGGTAACCAGGCTGATGTTAGTATGGGGTATGTAGCCCACAACCGAGTATTTACCCCTGACCAGGaatttaaactgtcaaaatatttgATCCGCTGTGCGGATATTTACTTTAGTTTAAACCGGAGCAGAAGAGCTCTTTTTTATGTTCGAAACAATTATTAA
- Protein Sequence
- MPRQRIKKTSRGECDITQYENAYEEVKKGTSLRKAAEIYGVHHSSLLRYKKKRDAAIEEGNQADVSMGYVAHNRVFTPDQEFKLSKYLIRCADIYFSLNRSRRALFYVRNNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00711786;
- 90% Identity
- iTF_00758093;
- 80% Identity
- -