Ofas000253.1
Basic Information
- Insect
- Oligia fasciuncula
- Gene Symbol
- JARID2
- Assembly
- GCA_963082905.1
- Location
- OY720386.1:3258404-3264419[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-20 9.6e-17 62.1 0.0 13 89 638 711 627 711 0.90
Sequence Information
- Coding Sequence
- atggcTAGCAGTCAAAATATGACTACTGAAGAATTCCTTCGTAAATTAGGAAGTGTGGAAGAGGATGATGAATTCTCTGAAGATAGAGTGCCAGCTGAGAAGCGTTCAGTAACGTACGTCAATTTACTGAACCTGATAAGAAATATGCGACAGCAGAAGGACTTAGATGACATAAAACCTGGACCAAGCGGCATTGCGATGCAATACAATTCTAGCTCCGAAGAATATGACGTGGTCTACTGTAGTCACCCAATGTACTTAGGAAGAGTCGCGGATGAACCTGTCCGTCTTGAGCGTCCTCAAAATGTTGAGTCGGAAAAACCCACGCATTCCGTTGGGGCAGGGTGTCGCTCTAGCGACGCGGATGAGCATGTCCTTATGGAAATCATGGAAAATACCACAGCCAATCTTGAGCGTACTCGAAATGTGCAGTCGCAGCCACCGACGCCTTGCGTCGCCTCAGAGTGTCACTCTAGCGACGCGGATGAGCATGTCTTTATGGAAATTATGGAAAATACAGCCAATCTCGAGCGTGCTCAAAATATTCGGTTAGAAACACCAATGCCTTGTGCCGCGGCAGCTTGTCGCTCTGACAAGGACGTCATAAACGCGTCTAAGGAATTCCTGGACTCACGCTGCAAAGTGTGCAAGCCTTGCATCAGAATTGACAAACTGATGAAAGTTTCGGCTTTGCTAGAATCTCATATTGGATTATCGAGAAAGGGATGTCAAAATAAAGCCGCTGTTCAAGAGAATGAACCAACAGAAAGAGAAGGTGAAACTTCTGTTTCACCTTCGCTTTCTGTTGAAAAAGAAATTGACCACGAAGAAGCTAATTCGACTAACGAAGACCCAGGTAATATTTACTTACTATTACCAAACCAAGCATCTATAATGATGAAAGTAAGAGCCAACATGGTACACGGCAAACAGTTCTTGGGGGTTGGTTTGGTCCCGAAAAATGAATCTCTTATAAACAAAGAGTTTTCGTTGGAGGAGCACGAACCGTTACTAGATCAAATTATTGAGAACCTGACAATCTATACAGACGTCAATTTTGAGGGTCGGGACGTAACTTTGGTTAGTCGAGACGTCGATTTGGAAGGTAGAGAAGTTCGAAGCGACAACACAGATGGACGAAAAGACATTCCGGTTAATCGAAGGATTAGCACGTCATCTGACAGCACTGCTGAGACGAGCGATGCTACGACTCAAGACCAAAAGACGCCAACCCGCCTTACAGCTGAGAAAAGACGGTTAAAGCGCATGGCTGTTAAAAAGAAGTTAGCTGAGCTGCATGAGCGCATGAGAGCAGAAAAGGAAAGAGAGATTGCCCGCGTCGAGGAAGAGAAGAGACGGGAAATATCGCGGATTACGGCGGAGAAGAATAGCGTTGTCGCGCAGATGTCGCGTGCACGATCGCGCTACCACGAGCGGTTTACCCAGATGGAGAAGGAGAAACAAAGAGATTTGGCACTCCTCAAGGTGAAGGTCAGACAGGAAGTGATATCTAAAATGGAGGCTACTCGCCGCATGTACAATGAAGTCGACGGCATAGCGGCGAACCTTGACAAAGAAAAGGATGCCAAGAATATGGATCCGGAAGAATTTTCAGATCAAGATGCGCCTGGCACCAGCAGCTCCATTCTGCCAACGGATGGCGGGTTGCTAGTAGAAGCTCCTGTGTACCACCCTACCGAGGAAGATTTTCGTGATCCAATTCGATACTATGAGAAGATTTATCCAGAAGCAGTTCTATTTGGCATATGTAAGGTGGTGCCCCCTCCTGGTTATAAGCCACCCTTTCGAGTGCATGATGAAATGAGGTTCGATGTTATGAACCAATACATTTCACGGTTGTTCAACCGCTGGGGACCGGCCGCGAGAGAACTTTGCGCGATCAAGTTGTCGCTGGCTCAACAAAAGGTTAATTTTACACGACCACCATTGCTGGATGGTGTCGAGGTAAACTTACCCAAATTATACCACCTCGTGCAACGGCACGGCGGTCTAGAAACGGTTTATAACAAGAAGCGATGGGGCAAGGTCGCAGATGACATGAAGTTTAATAAAGGGCCTAATACTGAGAGGAGACTCGACCAGATTTACGTGAAGTATTTACTACCATACGACACGCTTTCTCATCAGGAGCGCCAGGATATTATGCGGAAAGTCGAGATCGCATGGAACCGAAAGAATCAAAAGCTTTTGGACCGCGCCTTGAACCCGTTAAACCGCCAGCAGCGATTGCTTGGTTTAATAGACTCTTCTGACGATGAGACGGAAGATGAAGACACGATGGCCGCTGTCAATGAGGCAGAAGACTGCATCATCAAGGGCGCGGTCATGAACCGAGCTAAATTCAAGAAGGTACCCACGCCACTTACACTCTACTGTTAA
- Protein Sequence
- MASSQNMTTEEFLRKLGSVEEDDEFSEDRVPAEKRSVTYVNLLNLIRNMRQQKDLDDIKPGPSGIAMQYNSSSEEYDVVYCSHPMYLGRVADEPVRLERPQNVESEKPTHSVGAGCRSSDADEHVLMEIMENTTANLERTRNVQSQPPTPCVASECHSSDADEHVFMEIMENTANLERAQNIRLETPMPCAAAACRSDKDVINASKEFLDSRCKVCKPCIRIDKLMKVSALLESHIGLSRKGCQNKAAVQENEPTEREGETSVSPSLSVEKEIDHEEANSTNEDPGNIYLLLPNQASIMMKVRANMVHGKQFLGVGLVPKNESLINKEFSLEEHEPLLDQIIENLTIYTDVNFEGRDVTLVSRDVDLEGREVRSDNTDGRKDIPVNRRISTSSDSTAETSDATTQDQKTPTRLTAEKRRLKRMAVKKKLAELHERMRAEKEREIARVEEEKRREISRITAEKNSVVAQMSRARSRYHERFTQMEKEKQRDLALLKVKVRQEVISKMEATRRMYNEVDGIAANLDKEKDAKNMDPEEFSDQDAPGTSSSILPTDGGLLVEAPVYHPTEEDFRDPIRYYEKIYPEAVLFGICKVVPPPGYKPPFRVHDEMRFDVMNQYISRLFNRWGPAARELCAIKLSLAQQKVNFTRPPLLDGVEVNLPKLYHLVQRHGGLETVYNKKRWGKVADDMKFNKGPNTERRLDQIYVKYLLPYDTLSHQERQDIMRKVEIAWNRKNQKLLDRALNPLNRQQRLLGLIDSSDDETEDEDTMAAVNEAEDCIIKGAVMNRAKFKKVPTPLTLYC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -