Basic Information

Gene Symbol
Zmiz1
Assembly
GCA_029955525.1
Location
JARPMR010000012.1:11581609-11592943[+]

Transcription Factor Domain

TF Family
zf-MIZ
Domain
zf-MIZ domain
PFAM
PF02891
TF Group
Zinc-Coordinating Group
Description
This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.078 2e+03 0.1 0.9 4 24 452 472 449 477 0.88
2 2 4.8e-26 1.2e-21 77.6 4.8 1 50 536 585 536 585 0.98

Sequence Information

Coding Sequence
ATGTGCGAGGAGGCGCATCGGAACGCGGACAAATGCGCGACGGCGCACTCTGGTAATACGGCAGGATACGCGGGAGCAAACATAAGCTTCGCGGGAGCGCACGCTCCCGACTCGGAGAAACATCATTTTCTGCAAGATACCATAGGCTACAGAGTAAACGCACCAAGCGGCTATGGGTGCGCCGGCGGTCCGGGCGCGATGAGCGGCGGGGGCGAGAACGGGCAGTACGGCGCCACCGCCGCGATGGTCGCCGCGGCCACCACGGCCGCGATGCAGGACTCGCAGCCCTTCTCGCAGATGCAAAACAACATGACTATGGGAAATCCCCAGTACAGTGCGATGAACGGCTACGGCCAGCAGCGCAGCCATAATCCCGCTATGACGGGAATGGGAATGGGTGGCAATGGCGGGATTAACGGAATGACTGGTATGGGTCAGATGGGTAATGCCATGAACGGCATGAATCCAATGGCCCAGATGGCGAACATGGGAATGCACGCTAATATGATGTCCTCACAAATGGGACCCGGCCAAATGGGTGGGACGGCTAAAATGGGTCCAGGCTATCATCAAAGGCGGCACACGCCTTATCCATCAGGAACCATGCTCATGGGATCAAGAAAGAGTCAATATATGACTGGGCAGCCTAGTTTTGGTCCCGGTCCTGGTCAATATCCCACGGGGTATGGAGGCAGACCTGGTTTTCAAGCTCAATACCCACCACAGCAGGCACTTGGTCCAAGTGGAAATTTCGGTGCTGGAATGAGAGGTAGCATGAGGCAATCGACTCCACCTTACTCAAATCAGGGACAATATTTTAATGGCAGCGTCACGAATCAGTTTCCCCAGCATCAAGCAGGAAATGCGCAATATGGTGGACAGTATGGAGGACAGTTTGCGCAAGAAGTGGCGATGCGCTCGAATATGAGCTATCAGCATAGTCCTGTACCGGGAAATCCAACACCACCACTCACGCCTGCGAGTAGTATGCCACCTTACATCAGCCCAAACGCAGATGTCAAACCTCACTTTAACGAGCTCAAGCCACCGATGGGCATGCAGAATGACGAGCTCCGGCTAACATTCCCTGTAAGAGATGGTATTATACTACCACCTTTTAGATTAGAACATAATTTAGCAGTTAGCAATCATGTATTCCAATTAAAACCGACGGTCCACTCAACTTTAATATGGAGgtcGGATCTTGAGTTACAACTGAAATGCTTCCATCACGAAGATCGGCAAATGAATACCAACTGGCCAGCAAGCGTGCAGGTCTCAGTTAATGCAACACCTTTAGTTATTGATAGAGGCGAAACCAAAAATTCACACAAACCATTGTACCTGAAAGAAGTGTGCCAACCTGGCAGGAATACAATTCAAATCACCGTGTCAGCTTGCTGTTGCTCGCATCTATTCGTCCTACAATTAGTACATCGGCCGAGCGTGAGGAGTGTCTTGCAAGGGTTACTACGAAAGCGTCTTCTCACAGCAGACCATTGCATtgcaaaaattaaaatgaacttCAATCAAACGCCAGCTAATCCTAACAATAACTCTAATATTCCTAATGATAGAGACAGTGTAGAACAAACGGCGCTTAAAGTATCATTAAAATGTCCCATAACATTCAAGAAGATAACATTACCTGCGCGGGGGCACGAATGTAAACATATACAGTGCTTTGATTTGGAATCGTACTTGCAACTTAATTGCGAGAAAGGCTCATGGCGATGTCCAGTTTGCAACAAACCAGCTCAGTTGGAAGGCTTAGAAGTAGACCAATATATGTGGGGTATCCTAAATACCTTAAATACCTCCGATGTAGATGAAGTAACTATCGATAGTGGGGCAAATTGGAAAGCAACTAAGATTCCTACAAACACCGGTATCAAGCAGGAAGAAGATAGCAACGACGGTAGTGGGAAAAGATCGAAAGCTGTATCACCAGGGTCCATGAACATGCCAACAATGAACAACTGGGATATGAATCAACTATCACCCTATTTACCGCCAGATATGAACACTATTGCGAGCGGATCCATGATTTCATCGTATAATCAAGGAGGACAGAATAGAAACTCAGGATCAAGCAACCAAACCTATGATTTCGGCATGAGCAACGGACCAGGCAGCAACGAGTTTGCAGGCAATGGTCCTCTTTCTCATCTAAATGATAGTGTAAACTCCCTGGATCCACTCAACGCGATGGAGAAAAGTCTTAATGAGCAGATGCCACATACGCCTCACACGCCGCATACGCCCGGGTCTGCGCACACGCCAGGTGGGGGTGGAGGAGCGCACACACCAGGGTCGAGCCACACTCCAGGGCCGCCGTCCGTCGATCACCATCCTCTTACTGATGTTGACATCCCTGCTGATCTCAATTTTGATCCAGCAGCAGTGATTGATGGAGAGGGCACCGATAATCTAAACcTACTCCCGGAGACAAACGTGGACCCGATGGAACTCCTCTCGTACTTGGATGCACCAGCTCTAGGAGAACTGCTAGCGACGCCGCCTTCATCATCGTCTTCGGCAGGATCACATCCGCCCAGAGCGCCTTCCTCTGATGATCTCCTAGCCCTATTTGAATGA
Protein Sequence
MCEEAHRNADKCATAHSGNTAGYAGANISFAGAHAPDSEKHHFLQDTIGYRVNAPSGYGCAGGPGAMSGGGENGQYGATAAMVAAATTAAMQDSQPFSQMQNNMTMGNPQYSAMNGYGQQRSHNPAMTGMGMGGNGGINGMTGMGQMGNAMNGMNPMAQMANMGMHANMMSSQMGPGQMGGTAKMGPGYHQRRHTPYPSGTMLMGSRKSQYMTGQPSFGPGPGQYPTGYGGRPGFQAQYPPQQALGPSGNFGAGMRGSMRQSTPPYSNQGQYFNGSVTNQFPQHQAGNAQYGGQYGGQFAQEVAMRSNMSYQHSPVPGNPTPPLTPASSMPPYISPNADVKPHFNELKPPMGMQNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHSTLIWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLVIDRGETKNSHKPLYLKEVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKMNFNQTPANPNNNSNIPNDRDSVEQTALKVSLKCPITFKKITLPARGHECKHIQCFDLESYLQLNCEKGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNTSDVDEVTIDSGANWKATKIPTNTGIKQEEDSNDGSGKRSKAVSPGSMNMPTMNNWDMNQLSPYLPPDMNTIASGSMISSYNQGGQNRNSGSSNQTYDFGMSNGPGSNEFAGNGPLSHLNDSVNSLDPLNAMEKSLNEQMPHTPHTPHTPGSAHTPGGGGGAHTPGSSHTPGPPSVDHHPLTDVDIPADLNFDPAAVIDGEGTDNLNLLPETNVDPMELLSYLDAPALGELLATPPSSSSSAGSHPPRAPSSDDLLALFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00357101;
90% Identity
iTF_00205739;
80% Identity
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