Basic Information

Insect: Oeneis ivallda
Gene Symbol: -
Assembly: GCA_029955525.1
Location: JARPMR010000069.1:1-15868[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.69 70 5.6 0.5 1 23 109 131 109 131 0.93

2 28 0.69 70 5.6 0.5 1 23 172 194 172 194 0.93

3 28 0.69 70 5.6 0.5 1 23 235 257 235 257 0.93

4 28 0.69 70 5.6 0.5 1 23 298 320 298 320 0.93

5 28 0.69 70 5.6 0.5 1 23 361 383 361 383 0.93

6 28 0.69 70 5.6 0.5 1 23 424 446 424 446 0.93

7 28 0.69 70 5.6 0.5 1 23 487 509 487 509 0.93

8 28 0.69 70 5.6 0.5 1 23 550 572 550 572 0.93

9 28 0.69 70 5.6 0.5 1 23 613 635 613 635 0.93

10 28 0.69 70 5.6 0.5 1 23 676 698 676 698 0.93

11 28 0.69 70 5.6 0.5 1 23 739 761 739 761 0.93

12 28 0.69 70 5.6 0.5 1 23 802 824 802 824 0.93

13 28 0.69 70 5.6 0.5 1 23 865 887 865 887 0.93

14 28 0.69 70 5.6 0.5 1 23 928 950 928 950 0.93

15 28 0.69 70 5.6 0.5 1 23 991 1013 991 1013 0.93

16 28 0.69 70 5.6 0.5 1 23 1054 1076 1054 1076 0.93

17 28 0.69 70 5.6 0.5 1 23 1117 1139 1117 1139 0.93

18 28 0.69 70 5.6 0.5 1 23 1180 1202 1180 1202 0.93

19 28 0.69 70 5.6 0.5 1 23 1243 1265 1243 1265 0.93

20 28 0.69 70 5.6 0.5 1 23 1306 1328 1306 1328 0.93

21 28 0.69 70 5.6 0.5 1 23 1369 1391 1369 1391 0.93

22 28 0.69 70 5.6 0.5 1 23 1432 1454 1432 1454 0.93

23 28 0.69 70 5.6 0.5 1 23 1495 1517 1495 1517 0.93

24 28 0.69 70 5.6 0.5 1 23 1558 1580 1558 1580 0.93

25 28 0.69 70 5.6 0.5 1 23 1621 1643 1621 1643 0.93

26 28 0.69 70 5.6 0.5 1 23 1684 1706 1684 1706 0.93

27 28 0.69 70 5.6 0.5 1 23 1747 1769 1747 1769 0.93

28 28 0.014 1.4 10.9 0.9 2 23 1889 1910 1888 1911 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.69	70	5.6	0.5	1	23	109	131	109	131	0.93
2	28	0.69	70	5.6	0.5	1	23	172	194	172	194	0.93
3	28	0.69	70	5.6	0.5	1	23	235	257	235	257	0.93
4	28	0.69	70	5.6	0.5	1	23	298	320	298	320	0.93
5	28	0.69	70	5.6	0.5	1	23	361	383	361	383	0.93
6	28	0.69	70	5.6	0.5	1	23	424	446	424	446	0.93
7	28	0.69	70	5.6	0.5	1	23	487	509	487	509	0.93
8	28	0.69	70	5.6	0.5	1	23	550	572	550	572	0.93
9	28	0.69	70	5.6	0.5	1	23	613	635	613	635	0.93
10	28	0.69	70	5.6	0.5	1	23	676	698	676	698	0.93
11	28	0.69	70	5.6	0.5	1	23	739	761	739	761	0.93
12	28	0.69	70	5.6	0.5	1	23	802	824	802	824	0.93
13	28	0.69	70	5.6	0.5	1	23	865	887	865	887	0.93
14	28	0.69	70	5.6	0.5	1	23	928	950	928	950	0.93
15	28	0.69	70	5.6	0.5	1	23	991	1013	991	1013	0.93
16	28	0.69	70	5.6	0.5	1	23	1054	1076	1054	1076	0.93
17	28	0.69	70	5.6	0.5	1	23	1117	1139	1117	1139	0.93
18	28	0.69	70	5.6	0.5	1	23	1180	1202	1180	1202	0.93
19	28	0.69	70	5.6	0.5	1	23	1243	1265	1243	1265	0.93
20	28	0.69	70	5.6	0.5	1	23	1306	1328	1306	1328	0.93
21	28	0.69	70	5.6	0.5	1	23	1369	1391	1369	1391	0.93
22	28	0.69	70	5.6	0.5	1	23	1432	1454	1432	1454	0.93
23	28	0.69	70	5.6	0.5	1	23	1495	1517	1495	1517	0.93
24	28	0.69	70	5.6	0.5	1	23	1558	1580	1558	1580	0.93
25	28	0.69	70	5.6	0.5	1	23	1621	1643	1621	1643	0.93
26	28	0.69	70	5.6	0.5	1	23	1684	1706	1684	1706	0.93
27	28	0.69	70	5.6	0.5	1	23	1747	1769	1747	1769	0.93
28	28	0.014	1.4	10.9	0.9	2	23	1889	1910	1888	1911	0.93

Sequence Information

Coding Sequence: ATAAGACGCGAAAGATATACCTATGTGATGTCAAACGACAGGGAGTATGCTGCCAGTGACAATAACATCTCGAATAGATACGAGAAGAGGCGTCGGAGAGGTTTAAGAATCAGGCGAGCTCGACGGCCCAAAAGAACACATTCAGAGATCGCGCTAAGAGATGTGAGGAGTCCAGTGATACTGTCGTACGTCCAGTCGATCCAACGGCACTGTCTGATGGATACTACGCCGAGGCATTGCCCTTTTGTTGGCTGTAAAATGTTGTTGTATGGGATAATAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGCCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGCCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGACTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTTCCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACGCGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTGCGTAGGCTACCTAGAAACTCTTTGGATAACAAACTACAACGACCACCTCAACCTGTGCCACTTCGCGGATCGCGCGCACGTGTGCGTGTACTGTCACGAGGGGTTCGCGAGCGAGCGCGAGCGGGCGGCGCACGAGAACGAGCACATTGGCATCACAAAGCTAGCCGCCGCGCCCTCCACTACACGGTTCTCCACGAAAATCGCGAGCAACACCCAAACCGATCCCGAAATACCGAAAATAGACGTTCCCGAAGAGAAACTGAAGAAAATTGTCTCGTTCTTCGACAAAATCAACGACCCTGATCAGATAATCACGGAGATCAAGAAAAATCGATGCTCCGAAATGAATCTGCACACGATACATCGGAATCCGAGAACCGATATCGATTCTGTATCTGGATCGGAGAGTTCCGATTCGGGGAAGACTGCTCTGGTGAAGACTTGTCGCAATGTCACTTCGACTGTCGGTTTAGGAAGCTCTAATACCCGCGTATCGCCTGTGAGGTGTCAGTTGTGTGGAGAGAATTTTGATTATAGGCGTCAACTGAACCTGCACGTGGATCTTCACCACCGCGTTAACGAGAAGTTCACCAAATACAACAGCTGCGCCGGTATTCTCAATCGCGGGAACCCCCAAGCTTGCTCCCAAGTCCAAACAGCCACCCAAAGCCTAACCAGATCACTCGCGTCAACCGACATATCGGATACATCGAACTTGACGCAACTCTCCAGAAGGAAATCCGACGAGACCTTGACGTATGACCCGTCGAGTAACATAGTGTATTACACGTCCATGGAGTCTGTGAAAAAGCCGAGTTTTGTACAGAAGGTCCGCAGCGGGTTCTTTTACAAGTGGGAACCCGGCACGAAGATTATACGTGTGTGA
Protein Sequence: IRRERYTYVMSNDREYAASDNNISNRYEKRRRRGLRIRRARRPKRTHSEIALRDVRSPVILSYVQSIQRHCLMDTTPRHCPFVGCKMLLYGIINYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVDYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGFLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRCVGYLETLWITNYNDHLNLCHFADRAHVCVYCHEGFASERERAAHENEHIGITKLAAAPSTTRFSTKIASNTQTDPEIPKIDVPEEKLKKIVSFFDKINDPDQIITEIKKNRCSEMNLHTIHRNPRTDIDSVSGSESSDSGKTALVKTCRNVTSTVGLGSSNTRVSPVRCQLCGENFDYRRQLNLHVDLHHRVNEKFTKYNSCAGILNRGNPQACSQVQTATQSLTRSLASTDISDTSNLTQLSRRKSDETLTYDPSSNIVYYTSMESVKKPSFVQKVRSGFFYKWEPGTKIIRV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -