Oiva039307.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oeneis ivallda
Gene Symbol
-
Assembly
GCA_029955525.1
Location
JARPMR010000026.1:14260084-14306802[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 0.49 49 6.1 0.3 3 21 8 26 7 31 0.93
2 29 7.6 7.6e+02 2.3 1.1 2 23 63 85 62 85 0.93
3 29 0.019 1.9 10.5 3.8 3 23 103 123 101 123 0.96
4 29 5.4e-05 0.0055 18.5 1.5 1 23 129 151 129 151 0.99
5 29 0.044 4.4 9.4 0.7 1 19 158 176 158 177 0.94
6 29 0.044 4.4 9.4 0.7 1 19 202 220 202 221 0.94
7 29 0.044 4.4 9.4 0.7 1 19 246 264 246 265 0.94
8 29 0.044 4.4 9.4 0.7 1 19 290 308 290 309 0.94
9 29 0.044 4.4 9.4 0.7 1 19 334 352 334 353 0.94
10 29 0.00069 0.07 15.1 0.2 1 19 378 396 378 397 0.96
11 29 0.043 4.3 9.4 1.2 1 19 422 440 422 444 0.91
12 29 0.012 1.2 11.2 0.7 1 23 450 473 450 473 0.93
13 29 0.00015 0.015 17.1 2.4 1 23 825 847 825 847 0.98
14 29 1 1e+02 5.1 3.4 2 23 855 877 854 877 0.91
15 29 0.01 1.1 11.3 1.3 1 23 908 931 908 931 0.98
16 29 0.00052 0.052 15.4 1.2 2 23 936 958 935 959 0.94
17 29 1.9 1.9e+02 4.2 0.1 3 21 971 989 970 994 0.92
18 29 0.00071 0.072 15.0 2.2 3 23 1070 1090 1068 1090 0.97
19 29 0.00031 0.031 16.1 2.1 2 23 1097 1118 1096 1118 0.97
20 29 0.044 4.4 9.4 0.7 1 19 1125 1143 1125 1144 0.94
21 29 0.044 4.4 9.4 0.7 1 19 1169 1187 1169 1188 0.94
22 29 0.044 4.4 9.4 0.7 1 19 1213 1231 1213 1232 0.94
23 29 0.044 4.4 9.4 0.7 1 19 1257 1275 1257 1276 0.94
24 29 0.044 4.4 9.4 0.7 1 19 1301 1319 1301 1320 0.94
25 29 0.066 6.6 8.8 0.6 1 19 1345 1363 1345 1364 0.94
26 29 0.044 4.4 9.4 0.7 1 19 1389 1407 1389 1408 0.94
27 29 0.044 4.4 9.4 0.7 1 19 1433 1451 1433 1452 0.94
28 29 0.044 4.4 9.4 0.7 1 19 1477 1495 1477 1496 0.94
29 29 5.9e-05 0.0059 18.4 1.8 1 23 1535 1558 1535 1558 0.94

Sequence Information

Coding Sequence
ATGAACCCAGACGGTCCGCTCTGCGAGGAGTGCAACCTGCGCTTCGCGTCCGACGAAGCGTACCGTCATCACTTGGAGGTGTCGCCCAAGCACGCCGCTGACGGAAAAAGAAAACTCAACGCTCCCAAACAACAAAGGGGCAAACGAAACGACAACGGGCAAAAGCGTAAATCCTATGTTACCGTCACTTGCGAAGAGTGCGGCGAGCAAATCAAAGGGGCCGGGAGATACCACCATCATTTCCGAGTGTCACACCCAGACAAAACTGGCACCCAGTACATTAAGCGCGGGCAAGCGATTTGCCTCTGCGACCAGTGCGGGAAGTATTTTAcgACCATTCACGCGTTGCGAGATCACAAGCTATCGCACACGGGCAAGAAGGAGTTCCAATGCGACGTGTGCAAGAAGTTGTTCTACTACAAGTCGGCGCTCGTGACGCACATGAAAATGCACAGCGAGGTGCCGCCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAAGGCCAACTGCAACAGGCACGCGTGGGTGAGTCACTTCTGCCTCGAGGCGACGCTCGTGACGCACATGAAGACGCACAGCGAGGAGCAGCCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAAGGCCAACTGCAACAGGCACGCGTGGATGAGTCACTTCTGCCTCGAGGCGACGCTCGTGACGCACATGAAGACGCACAGCGAGGAGCAGCCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAAGGCCAACTGCAACAGGCACGCGTGGGTGAGTCACTTCTGCCTCGAGGCGACGCTCGTGACGCACATGAAGACGCACAGCGAGGAGCAGCCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAAGGCCAACTGCAACAGGCACGCGTGGGTGAGTCACTTCTGCCTCGAGGCGACGCTCGTGACGCACATGAAGACGCACAGCGAGGAGCAGCCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAAGGCCAACTGCAACAGGCACGCGTGGGTGAGTCACTTCTGCCTCGAGGCGACGCTCGTGACGCACATGAAGACGCACAGCGAGGAGCAACCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAAGGCCAACTACAACAGGCACGCGTGGGTGAGTTACTTCTGCCTCGAGGCGACGCTCGTGACGCACATGAATACGCACAGCGAGGAGCAGCCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAAGGCCAACTGCAACAGGCACGCGTGGACGCACAAGGAGCGGAAGCCGTATCCGTGCCACGCGTGCGAGAAGTCGTTCCCCAACGCGACAGCGATGCGCACGCACGTGGAGCACGCGCACCTCAAGAAGCCCTACCCCAGGAAGACGCACGGCCCGCGCCAGCGCGCCAGCCGCGCGCGCCATGTCAAGGAACCCGTCTGCGGCACCATATGGCCCAAGTTCTGCATGGTGTGCCTGAGCACAGGCGAGGACTGCAAGCTGTTCATGGGGAACACATATAACTTGGATATGGAATTTGGAAATTTGACTGGAATATCACTTCAAGGCCAGACTCACTTTGCGCCGCACTTCTGCGCGGAGTGCGCTCAGAGGCTGAGCAATTGCGGCAAGTTTCGGGACAAGAGTCTCAGGGCCTACCATTTACTGTTGGGATTGGTTGAACTGGATAAACCGTTAACAATACAGAATATAAAAATACTCAGCAGATCTAACAATCTTGCATCAAGCATAGCCAAGAAATCATTCCAACCAAATTACTGCGACCTAAATCTGAATCACGACGAACTAAAAGAGCAAGATAAACTTCAGCAAGAACTGGCAAAGAATAAACCAATAAAATTACAACAAGATTTACCAAACAATGAACCGATAAAAACACAAGAAGACTCACTTAACAATGAACCAATAAAAATTGAAGTTAAATTATTTGATGGTAAACTTATGCTGAATCCTGTCCCAGaagttgaaaataaaattgaaccTAAAAGTTTTGATGATTCCCAAAGTGATTTCGATGTCGACATTGATAATATTGACGATGACATCGACGGTGATATTGATACTCAAGGCGTCAAAAGAATCAAAGACAAGGTTGACAAGTTCATGAATGATGTAATGAATGACACAGACAACGATTGGGACTTCTTAAAAGACAGCGACAGCGATAATAATGATCCGGTATCTGTTATCAAAActgaaagtaaaataaatactaaGAAAAAACTTATTCGCAAACCGAGAACTGCGCCTCGAAAACGACAACAGGTCAAAAAGCAGGTGAAAGAAGATAACCAGGACTATTTAGAATATTTCAAAGTAACTGAATTGACTCACGAGGAGCAATTAGAAGATATACAGAAGAGGAAAGAGAAATCTAATTATAAAAATGGATTGTACAAATGCAAGAAGTGCTTCAAAGGCTTCGTGAGTAGCGACGCTTACAAGACACATATGGATAGACACACTGATAAATATGGGAAAAGCGTATGTCCAATATGCGCACTGTGCTTCCGCTCAGATTACGCCATGCGGCACCACGTGGTCCGCTGCCACAGCACTCGTTACAGCTGCCTACGTTGCCCGCTCGTCACCAACCACGACCAAGCGGCCATCAACCACGCGAACTGGCACCGAGGCGTCACGTTCACATGCCCCCACTGCTTAGAGGTGCGCCGCTCTAAGTCGGGGTACATGTCGCACCTGCGCATAATGCACCCTACAGACACGGTGTGTACCCAGTGCGGGTACTCCTTCGTCAACGAGCGCGGGCTCCGCACACACATCAACCTGAAGCACCACAACGAGGACTTGCTGAACCCAGACGGTCCGCTCTGCGAGGAGTGCAACCTGCGCTTCGCATCCGACGAGGCTTACCTTCAGCACTTGGAGGTGTCGCCCAAGCACGCCGCTGACGGAACAAGACAACGCAACACTCCGAAACAAAGCTGTCACAGGTCCAACGACTGGCAGAAAAACAAAGAGCGCTTTCGCAAACCCATGGTCGTCGTCACTTGCGAAGAGtgcGGCGAGCAAATCAAAGGGGTCGGGAGATACCACCATCATTTCAGACGGTTACACCCGAACAAAACTCGCACCCAATACCTTCAGTACAGGCAACCGAGCTGCCTGTGCGACCAGTGCGGGAAGTCTTTTAAGTCCATTTACGGGTTGCGAGACCACAAGCTAACGCACACGGGCAAGAAGCAGCTCCAGTGCGACATGTGCAAAAAGTTGTTCTACCACAAGGCGGCGCTCGTGACGCACATGAAGACGCACAGCGAGGAGCAGCCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAAGGCCAACTGCAACAGGCACGCGTGGGTGAGTCACTTCTGCCTCGAGGCGACGCTCGTGACGCACATGAAGACGCACAGCGAGGAGCAGCCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAAGGCCAACTGCAACAGGCACGCGTGGGTGAGTCACTTCTGCCTCGAGGCGACGCTCGTGACGCACATGAAGACGCACAGCGAGGAGCAGCCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAAGGCCAACTGCAACAGGCACGCGTGGATGAGTCACTTCTGCCTCGAGGCGACGCTCGTGACGCACATGAAGACGCACAGCGAGGAGCAGCCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAAGGCCAACTGCAACAGGCACGCGTGGGTGAGTCACTTCTGCCTCGAGGCGACGCTCGTGACGCACATGAAGACGCACAGCGAGGAGCAGCCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAAGGCCAACTGCAACAGGCACGCGTGGGTGAGTCACTTCTGCCTCGAGGCGACGCTCGTGACGCACATGAAGACGCACAGCGAGGAGCAGCCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAGGGCCAACTGCAACAGGCACGCGTGGGTGAGTCACTTCTGCCTCGAGGCGACGCTCGTGACGCACATGAAGACGCACAGCGAGGAGCAGCCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAAGGCCAACTGCAACAGGCACGCGTGGGTGAGTCACTTCTGCCTCGAGGCAGCGCTCGTGACGCACATGAAGACGCACAGCGAGGAGCAGCCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAAGGCCAACTGCAACAGGCACGCGTGGGTGAGTCACTTCTGCCTCGAGGCGACGCTCGTGACGCACATGAAGACGCACATCGAGGAGCAGCCGGTGTACGCGTGCGCCGTGTGCGACAAGAAGTTCGTCAACAAGGCCAACTGCAACAGGCACGCGTGGGTGAGTCACTTCTGCCTCGAGGCAGCGCTCGTGACGCACATGAAGACGCACAGCGAGGAGCCGCCGGTGTACGCGTGCGCCAAGACACAGACGCACAAAGAGCAGAAGCCGTACCAGTGTCACGCGTGTGATAAGTCGTTCGCCAACGCGTCCACGCTGCGCGCGCACGTGGAGCACACGCACCTCAAGAAGCCATACCCGAAGAAAACGCGAGGCCCGCGCCAGCGCGCCAGTCGCGCGCGCCACGCCAAGGAACCCGTCTGCGGCACCATATGGCCAAAGtttcttgaagtgtcacccggcaaaccaatttataagacgttgtcacgtcaaaatgtcCATACACGGTCCATATACGCTAAATACACGGACGATATACCATCAACGGCAGACACTACTCTTGCTTTATACGCCGACGACACGGCCTACATAGCAACCTCATTACCAACCCGGCCACAACACGCAGTAGACAGACTGCAGCGGGTTCTGAATCTGCTCCCCGAATGGCTCAATAAATGGAGGCTTGcggtcaacgtggggaagacgcaAGCCATCATGTTCGGAGGAGCCAAAAAGCTGCCCTCCCGGCTCACACTGCTGGACCAACCAATCCCTTGGTCTACGGAGGTGACGTATCTGGGAGTCACGATTGATAGACGCCTTAATATGAAAGCGCAAGCGAGGAAAGCCGTCAACAAGACACGCGCAGCAACGATGCTGCTTCGCCCAGTCCTACACTCTAGACTCCCGCTGCGTACCAAGCTTGGAATTTACAAAACTTACATCAGATCCAGGCTTACGTACGCAGCGCCGGCATGGTACTCGTTGACCAGTGAGACCAGCAAAGAGAACCTCCGCACACAGCAGTCCATCGCCTTGAGGCGTATCACCAAAGCTCCCAGATATGTCAGAAACAGCACCATAATGCGTGACCTAAAGGTGGAGAGCCTGGATGACTTCATCACCCGCCTCACGAACATGATGTTCACCAGAGCGGACGCCTCCACCTTTGACCACATCAGAGGGATAGCGCCATATCATAGGCGCCCCCCAGATAAGAGAGTTTCCGCGCGACTTGATCGCGCCATAACAATAGAAGACCTTAATTAA
Protein Sequence
MNPDGPLCEECNLRFASDEAYRHHLEVSPKHAADGKRKLNAPKQQRGKRNDNGQKRKSYVTVTCEECGEQIKGAGRYHHHFRVSHPDKTGTQYIKRGQAICLCDQCGKYFTTIHALRDHKLSHTGKKEFQCDVCKKLFYYKSALVTHMKMHSEVPPVYACAVCDKKFVNKANCNRHAWVSHFCLEATLVTHMKTHSEEQPVYACAVCDKKFVNKANCNRHAWMSHFCLEATLVTHMKTHSEEQPVYACAVCDKKFVNKANCNRHAWVSHFCLEATLVTHMKTHSEEQPVYACAVCDKKFVNKANCNRHAWVSHFCLEATLVTHMKTHSEEQPVYACAVCDKKFVNKANCNRHAWVSHFCLEATLVTHMKTHSEEQPVYACAVCDKKFVNKANYNRHAWVSYFCLEATLVTHMNTHSEEQPVYACAVCDKKFVNKANCNRHAWTHKERKPYPCHACEKSFPNATAMRTHVEHAHLKKPYPRKTHGPRQRASRARHVKEPVCGTIWPKFCMVCLSTGEDCKLFMGNTYNLDMEFGNLTGISLQGQTHFAPHFCAECAQRLSNCGKFRDKSLRAYHLLLGLVELDKPLTIQNIKILSRSNNLASSIAKKSFQPNYCDLNLNHDELKEQDKLQQELAKNKPIKLQQDLPNNEPIKTQEDSLNNEPIKIEVKLFDGKLMLNPVPEVENKIEPKSFDDSQSDFDVDIDNIDDDIDGDIDTQGVKRIKDKVDKFMNDVMNDTDNDWDFLKDSDSDNNDPVSVIKTESKINTKKKLIRKPRTAPRKRQQVKKQVKEDNQDYLEYFKVTELTHEEQLEDIQKRKEKSNYKNGLYKCKKCFKGFVSSDAYKTHMDRHTDKYGKSVCPICALCFRSDYAMRHHVVRCHSTRYSCLRCPLVTNHDQAAINHANWHRGVTFTCPHCLEVRRSKSGYMSHLRIMHPTDTVCTQCGYSFVNERGLRTHINLKHHNEDLLNPDGPLCEECNLRFASDEAYLQHLEVSPKHAADGTRQRNTPKQSCHRSNDWQKNKERFRKPMVVVTCEECGEQIKGVGRYHHHFRRLHPNKTRTQYLQYRQPSCLCDQCGKSFKSIYGLRDHKLTHTGKKQLQCDMCKKLFYHKAALVTHMKTHSEEQPVYACAVCDKKFVNKANCNRHAWVSHFCLEATLVTHMKTHSEEQPVYACAVCDKKFVNKANCNRHAWVSHFCLEATLVTHMKTHSEEQPVYACAVCDKKFVNKANCNRHAWMSHFCLEATLVTHMKTHSEEQPVYACAVCDKKFVNKANCNRHAWVSHFCLEATLVTHMKTHSEEQPVYACAVCDKKFVNKANCNRHAWVSHFCLEATLVTHMKTHSEEQPVYACAVCDKKFVNRANCNRHAWVSHFCLEATLVTHMKTHSEEQPVYACAVCDKKFVNKANCNRHAWVSHFCLEAALVTHMKTHSEEQPVYACAVCDKKFVNKANCNRHAWVSHFCLEATLVTHMKTHIEEQPVYACAVCDKKFVNKANCNRHAWVSHFCLEAALVTHMKTHSEEPPVYACAKTQTHKEQKPYQCHACDKSFANASTLRAHVEHTHLKKPYPKKTRGPRQRASRARHAKEPVCGTIWPKFLEVSPGKPIYKTLSRQNVHTRSIYAKYTDDIPSTADTTLALYADDTAYIATSLPTRPQHAVDRLQRVLNLLPEWLNKWRLAVNVGKTQAIMFGGAKKLPSRLTLLDQPIPWSTEVTYLGVTIDRRLNMKAQARKAVNKTRAATMLLRPVLHSRLPLRTKLGIYKTYIRSRLTYAAPAWYSLTSETSKENLRTQQSIALRRITKAPRYVRNSTIMRDLKVESLDDFITRLTNMMFTRADASTFDHIRGIAPYHRRPPDKRVSARLDRAITIEDLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-