Oiva039362.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oeneis ivallda
Gene Symbol
-
Assembly
GCA_029955525.1
Location
JARPMR010000026.1:14894225-14918908[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 2.1 2.2e+02 4.1 1.6 2 23 447 468 446 468 0.95
2 16 0.39 40 6.4 1.3 1 23 472 494 472 494 0.97
3 16 0.00057 0.057 15.3 4.8 1 23 499 522 499 522 0.97
4 16 0.0097 0.97 11.5 0.1 1 23 526 549 526 549 0.93
5 16 0.0097 0.97 11.5 0.1 1 23 560 583 560 583 0.93
6 16 0.0097 0.97 11.5 0.1 1 23 594 617 594 617 0.93
7 16 0.0097 0.97 11.5 0.1 1 23 628 651 628 651 0.93
8 16 0.0097 0.97 11.5 0.1 1 23 662 685 662 685 0.93
9 16 3 3e+02 3.6 0.1 3 21 698 716 697 721 0.91
10 16 1.9e-05 0.0019 20.0 0.4 3 23 788 808 787 808 0.99
11 16 3.4e-05 0.0034 19.2 1.8 1 23 814 836 814 836 0.98
12 16 7.7e-05 0.0077 18.1 0.5 1 21 843 863 843 864 0.95
13 16 7.7e-05 0.0077 18.1 0.5 1 21 911 931 911 932 0.95
14 16 7.7e-05 0.0077 18.1 0.5 1 21 979 999 979 1000 0.95
15 16 3.8e-06 0.00039 22.2 1.9 1 23 1047 1069 1047 1069 0.98
16 16 0.065 6.5 8.9 0.9 1 21 1076 1096 1076 1099 0.81

Sequence Information

Coding Sequence
ATGAAGTGCTGCGTGCCTTTGTGTAGAAATACAGATGAAGATCATACGATTACTGTCCCAGTACATGACGGTCAAGAGCGGATTACGTTTAGCAGGTTCCCTACAACAGCCGGCCAGCGCGCGGCGTGGCTGCAGATGTTAGGTTTGACAGAGAGTGACTTGCCACACGGTGCAGCGGTGTGCTCTGAGCATTTCAGGAGAAGTGACTTCACTGTGACCAGTGATGGCATCATAAAACTTAACAAGGACTCTATACCTTTacagttcTGCATGATATGCCTGGCCTCTGGTCACAGTAAAATGTATCCGATGTCCCAAAACTATTTAGAGAAGGCCTACACCACCGTGACAGGGATTGCGGTGAGTTTCATTCGCGACAAAATAAACACTCAGCCACGGGTGTGTGTAGAATGTGCTCAGAGGTTGGTGAACTGTGACAGATTCCGAAATAAGGGCTTGAGAGCCTTTAAATCGTTAATGCAGATACTTCAGAACAATAAAGTATTGACACCGCACAATTTAAAATCAGTTAACAGAATTAGGAAACAGCTAATATCTAATATAGCGAAACACATATTTGAGCCCGACTACTGTGACCTCTATGTGAAATATAATGAAGAAGACAGTATGATACATTCAGAGGAAGAATACGACTCGGATACAAAAATAACTATTGAAATGAAGAGAGaaataaatgatgatgatgaagatgtatTTTATCCTAATGAATCAGATGAATTTAAGAATAATTTCCCCACCAGTAATGACATTGATGACAATAATGATGATACCAAAAAACCTGGCATAATTAACTATGATGTTCCAGTTAATAATACGAATATCCTTATGAATACAGATGTAACCGATGTTAAGAATGACGACGCTGTTGTGTTGATGGTTGTTAATAGTGCTGATGAAGTGAAATCTTTGGTATTTGACACTAAACGTGACATTGATAATAAAGATGTAATACCTGGAATTGGTAAAACAATTGAAAATCTACAGTTTTTTAGTGTGTACAGTGACAGAAAaagcaaaaataaaaacaatgcaCAAAGTATAACCAATAAGCAAAAtaagAATGATGATCAGTTGAGTTCTAAAAGCGAAACACTTGAAGCAAGTGTTTCGAAACCCAAGAAACAGTATCCAATTGGAAATTCGTTCATGAAAACTATTTTAACTTACGAAGAACAGTTAGCAGATTTACAAAGAAGAAAACACACAGAACACTATAAGTTGTATCCATACAAATGTGACATTTGCTTCACAGGACGCTGGTCTATCTTCACTTACAATCGACATATGGATAAGCACACAGATaaacacGGAAAATGGGAGTGCGCCATATGTGGCATACATCACAAAACGCGCACACGTCTCAGACTCCACGTAAGAGCGCACGGGGAAAGGTATAGCTGTACTCGGTGCAACTTTGTCACAGGCACAAGCGAGAAGGTAGAGCACCACGCCCGTTGGCACAGCGGCCTGGCGTTCAAGTGTCCACACTGCGAAGCCAAGTTCAGGAAAAAGAGCACATATTTCTCGCATATACGCCTAAAGCACCCTTCAGACTTCGCATGCCCGCTGTGCGGATTCAGTTTCGTCAGCGAACACGGCGTGAAGTTGCACCTCGTCATGGTCCATCGTTCCGAAGACGTGCAACACCCTTCAGACTTCGCGTGCCCGCTGTGCGGATTCAGTTTCGTCAGCGAACACGGCGTGAAGTTGCACCTCGTCATGGTCCATCGCTCCGAACACGTGCAACACCCTTCAGACTTCGCGTGCCCGCTGTGCGGATTCAGTTTCGTCAGCGAACACGGCGTGAAGTTGCACCTCGTCATGGTCCATCGCTCCGAACACGTGCAACACCCTTCAGACTTCGCGTGCCCGCTGTGCGGATTCAGTTTCGTCAGCGAACACGGCGTGAAGTTGCACCTCGTCATGGTCCATCGCTCCGAACACGTGCAACACCCTTCAGACTTCGCATGCCCGCTGTGCGGATTCAGTTTCGTCAGCGAACACGGCGTGAAGTTGCACCTCGTCATGGTCCATCGCTCCGAAGACGTGCAAAACTTGTCTGGCCCGTCGTGCGCGCAGTGCAACGTCCGCTTCGCGTCCGAGGCTGCGTATGACACGCACATATCAGTATCTCCCAAACACGTTAGTTCCGGCATTCCCATGCGGAATGAAACCCATTACGAGCCCCGGAAGCGCCCCCCTCGGAACAAAGCCCAGGAGAAGCCCCGCCCCCTGGACAAGCCAGCCCAGGGCAAGCGCCGGGAGGGCCGCCCGCCGAACAAACCCCAGCGCAAGTCCCGGGAGAAACAGCCCCAAGCTAAGACATACCCTGGGAGACTGTGTGATGTCTGCGGGAAGAACTTCCAAAGCCTTTCGTCCCTCGCCCAGCACATGAACACGCACACGGGGGCGAAGCCCTACAAGTGTGACCGCTGCGGTAAGAGCTACTTCACGCAAGTGAGCCTGAAGTACCACCTGCGGGCGCACAGCGACAGCCCGCGGCCCTACTCGTGCGGCGTGTGCAACAAGGAGTTCTCCTTCTGGTCGAACCGACAGCGACACATGCTGCGACAACCCGCGGCCCTACTCGTGCGGCGTGTGCAACAAGGAGTTCTCCTTCTGGTCGAACCGACAGCGACACATGCTGGTGAGTGGTCACAAGCGAGCCTGAAGTACCACCTGCGGGCGCACAGCGACAACCCGCGGCCCTACTCGTGCGGCGTGTGCAACAAGGAGTTCTCCTTCTGGTCGAACCGACAGCGACACATGCTGCGACAACCCGCGGCCCTACTCGTGCGGCGTGTGCAACAAGGAGTTCTCCTTCTGGTCGAACCGACAGCGACACATGCTGGTGAGTGGTCACAAGCGAGCCTGAAGTACCACCTGCGGGCGCACAGCGACAACCCGCGGCCCTACTCGTGCGGCGTGTGCAACAAGGAGTTCTCCTTCTGGTCGAACCGACAGCGACACATGCTGCGACAGCCCGCGGCCCTACTCGTGCGGCGTGTGCAACAAGGAGTTCTCTTTCTGGTCGAACCGACAGCGACACATGCTGGTGAGTGGTCACAAGTGAGCCTGAAGTACCACCTGCGGGCGCACAGCGACAGCCCGCGGCCCTACTCGTGCGGCGTGTGCAACAAGAAGTTCTCTTTCTGGTCGAACCGACAGCGACACATGCTGACACATAACCCCAAAAGGCCCTTATACACGTGCGATATATGCAGCAAGTCGTTCACATTGCTGGCGTCCAAAGTTAGCCACGTGACGCATGTACATGACAAAGTGCCGTGGCCCAAGCGACACCGACCACAGAGACGGGGAAAGACGCGGGGACACAGCGAGGACTACAGCGATTCGCAGGACGCACATGACGCCAGTGACGCACATGACGCCAGTGACGCGCATGACGCCGGTGACGCACATGACGCCGGTGACGCACATGACGCCGGTGACGCACATGACGCCGGTGACGCACATGGCGCCGGTGACGCACATGACGCCAGTGACGCACATGACGCTGGTGACGCACATGACGCTAGTGTGGGGGACACAGATGACGCATCAGAAATCGTAATATTAGGAAACTAG
Protein Sequence
MKCCVPLCRNTDEDHTITVPVHDGQERITFSRFPTTAGQRAAWLQMLGLTESDLPHGAAVCSEHFRRSDFTVTSDGIIKLNKDSIPLQFCMICLASGHSKMYPMSQNYLEKAYTTVTGIAVSFIRDKINTQPRVCVECAQRLVNCDRFRNKGLRAFKSLMQILQNNKVLTPHNLKSVNRIRKQLISNIAKHIFEPDYCDLYVKYNEEDSMIHSEEEYDSDTKITIEMKREINDDDEDVFYPNESDEFKNNFPTSNDIDDNNDDTKKPGIINYDVPVNNTNILMNTDVTDVKNDDAVVLMVVNSADEVKSLVFDTKRDIDNKDVIPGIGKTIENLQFFSVYSDRKSKNKNNAQSITNKQNKNDDQLSSKSETLEASVSKPKKQYPIGNSFMKTILTYEEQLADLQRRKHTEHYKLYPYKCDICFTGRWSIFTYNRHMDKHTDKHGKWECAICGIHHKTRTRLRLHVRAHGERYSCTRCNFVTGTSEKVEHHARWHSGLAFKCPHCEAKFRKKSTYFSHIRLKHPSDFACPLCGFSFVSEHGVKLHLVMVHRSEDVQHPSDFACPLCGFSFVSEHGVKLHLVMVHRSEHVQHPSDFACPLCGFSFVSEHGVKLHLVMVHRSEHVQHPSDFACPLCGFSFVSEHGVKLHLVMVHRSEHVQHPSDFACPLCGFSFVSEHGVKLHLVMVHRSEDVQNLSGPSCAQCNVRFASEAAYDTHISVSPKHVSSGIPMRNETHYEPRKRPPRNKAQEKPRPLDKPAQGKRREGRPPNKPQRKSREKQPQAKTYPGRLCDVCGKNFQSLSSLAQHMNTHTGAKPYKCDRCGKSYFTQVSLKYHLRAHSDSPRPYSCGVCNKEFSFWSNRQRHMLRQPAALLVRRVQQGVLLLVEPTATHAGEWSQASLKYHLRAHSDNPRPYSCGVCNKEFSFWSNRQRHMLRQPAALLVRRVQQGVLLLVEPTATHAGEWSQASLKYHLRAHSDNPRPYSCGVCNKEFSFWSNRQRHMLRQPAALLVRRVQQGVLFLVEPTATHAGEWSQVSLKYHLRAHSDSPRPYSCGVCNKKFSFWSNRQRHMLTHNPKRPLYTCDICSKSFTLLASKVSHVTHVHDKVPWPKRHRPQRRGKTRGHSEDYSDSQDAHDASDAHDASDAHDAGDAHDAGDAHDAGDAHDAGDAHGAGDAHDASDAHDAGDAHDASVGDTDDASEIVILGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01092091;
90% Identity
iTF_01092091;
80% Identity
iTF_01092091;