Oiva042511.2
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- -
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000029.1:14560107-14587881[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.00013 0.013 17.4 5.6 1 23 10 32 10 32 0.99 2 30 0.00015 0.015 17.2 2.7 1 23 39 61 39 61 0.99 3 30 2.4e-05 0.0024 19.6 0.1 1 23 67 89 67 89 0.93 4 30 8.7e-06 0.00088 21.0 0.0 1 23 95 117 95 117 0.98 5 30 4.3e-05 0.0044 18.8 4.5 1 23 531 554 531 554 0.96 6 30 0.00067 0.067 15.1 3.5 1 23 560 583 560 583 0.96 7 30 0.0003 0.03 16.2 0.3 2 23 590 611 589 611 0.97 8 30 8.2e-05 0.0083 18.0 1.5 1 23 617 639 617 639 0.97 9 30 0.024 2.4 10.2 0.2 1 22 645 666 645 666 0.97 10 30 0.024 2.4 10.2 0.2 1 22 717 738 717 738 0.97 11 30 0.024 2.4 10.2 0.2 1 22 789 810 789 810 0.97 12 30 0.024 2.4 10.2 0.2 1 22 861 882 861 882 0.97 13 30 0.024 2.4 10.2 0.2 1 22 933 954 933 954 0.97 14 30 0.024 2.4 10.2 0.2 1 22 1005 1026 1005 1026 0.97 15 30 0.024 2.4 10.2 0.2 1 22 1077 1098 1077 1098 0.97 16 30 0.024 2.4 10.2 0.2 1 22 1149 1170 1149 1170 0.97 17 30 0.024 2.4 10.2 0.2 1 22 1221 1242 1221 1242 0.97 18 30 0.024 2.4 10.2 0.2 1 22 1293 1314 1293 1314 0.97 19 30 0.024 2.4 10.2 0.2 1 22 1368 1389 1368 1389 0.97 20 30 0.024 2.4 10.2 0.2 1 22 1440 1461 1440 1461 0.97 21 30 0.024 2.4 10.2 0.2 1 22 1512 1533 1512 1533 0.97 22 30 0.024 2.4 10.2 0.2 1 22 1584 1605 1584 1605 0.97 23 30 0.024 2.4 10.2 0.2 1 22 1659 1680 1659 1680 0.97 24 30 0.039 3.9 9.5 0.1 1 21 1731 1751 1731 1752 0.96 25 30 0.024 2.4 10.2 0.2 1 22 1803 1824 1803 1824 0.97 26 30 0.024 2.4 10.2 0.2 1 22 1892 1913 1892 1913 0.97 27 30 0.024 2.4 10.2 0.2 1 22 1964 1985 1964 1985 0.97 28 30 0.024 2.4 10.2 0.2 1 22 2036 2057 2036 2057 0.97 29 30 0.024 2.4 10.2 0.2 1 22 2108 2129 2108 2129 0.97 30 30 0.024 2.4 10.2 0.2 1 22 2180 2201 2180 2201 0.97
Sequence Information
- Coding Sequence
- ATGAACATGCATAGCGGCTCGCGACCTTTCACCTGCAAAGTGTGCCACAAATCCTTCGCCTCCAAGTATACGCAGCAATCGCATATGAAGACACATCTCGACCGACCGCGACCCTACAAATGTGGCCAGTGCGACAAATCATTCTTCACCACACAGAACTTGAGTCAGCACGAGAAAACTCACTCCAACATCAGGGACTTTGTGTGTAACATTTGCGGTAAAGCGTTCGGAACACAGCACAATCTGGAAGTGCACGGCGTGGTGCATTCCGGCAGCAAGCCGTTCGTGTGCGGAATTTGCGGAAAAGGTTTCGCGCGGCGTGCGGAAGTGCGGGACCATATGCGGATACATACAGAGGATACGCTGACACTAGAATCGGGCCACGTTCTCTACTATCGGGAAGGCGAGCAGACGTCCCAAGGTGGAGTGGGATTTCTGATCAACAAAGTGCTCGCAAATAACATCGTGGAGATCAGTAGTGTGTCGTCGAGGGTGGCATATGTTATACTTAAGTTGAACCGGAGGTATTCTCTGAAAGTAGTGCAGGTTTATGCGCCCACGTCGTCACACTCTGACGAAGAAGTAGAAGCCTTATACGAAGACGTCGTCAAGGCTATGGATAAAACTACTAAATCCTACTTCACGGTTGTTATGGGGGACTTCAACGCGAAAGTGGGAGTACAAGAACGCAACGAATCAAGAGTTGGGCCTCATGGAGTTGGTAACAGAAATCGCAGGGGGCAAATGCTAGTCAACTTTCTTGAACGGAAAGGGCTCTTCCTAATGAACTCATTTTTCAAGAAGAGTGCTCATAGGAAGTGGACTTGGCAGAGCCCCGATAACGTGACCAGGAACGAGATTGACTTCATCATGTCGGATCGTAGGGATATATTCAGAGATGTCTCCGTGATCAACCGATTTAATACTGGAAGCGATCACCGTCTTGTGAGAGGATCCTTGAATATAGACCTTCAGTTAGAGAGACGACGCCTGATGGAGTCAACTCTTCGCCCAAGACCACACCAACCTATGGCTGTAACAGAAAAGTTCCAATTAGAGCTTAGGAACCGATTCGATTTGCTGGAAACCAACGACGAGGTTGATCAGAAATATGGCGACTTTGTGAATGTTGGTGTTGGGAGCGAGACCCTGGATTTGATGCAGCAGAGACGGGAAATGTGCTCAACTTTACCAGACAGGCAGGCTCTAAACAAGCTTATAAAGAAGCGAATACGTTTCGATATGCGCGCTGCTTCGACGCGCAATATACAAGATGCGATAGAACGCAATAGAGGAGCTAAAGTATTCGCTAAAAGTCTTGGGAGAAGCCATCTGACAAAGTTGAGAACATCGGACGGCCGGGTTGTTGCTTCAAAGCCAGAGGTGTTAGTTGAGATCGAGCGGTTTTACGGGCAGCTGTACTCGGCCCATGCTCCGAAACCTGCACCCACTGAAAATGCGAACGACAAAAGAGCGAAACTTGTGCGCCACTATACCGACGACCTCCCGGATATTGACCTAGGCGAGATTAGTATAGCCCTCGGACAGCTGAAGAACAACAAAGCCCCAGGCGATGACGgtgAACGACCGTTCAAATGTGACATCTGCGGCGCATGCTTCACGCAGAGGTCGAACCTGCACTCCCACAAACGGGCGACGCATCTGGACGACAAGCGCTACCACTGTACCGAGTGCCCTAAGAGATTTAAGAGGAGACGGTTGCTGGACTACCACATGAAGGCGTCCCAcacgggcgagcggccgctggtGTGCGAGATATGCAACGCCACGTTCGTGTACCCCGAGCATTACAAGAAGCACGCGCGCATCCACAGCGGCGAGAAGCCCTATACGTGCGAGGTGTGCGGCAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGAGAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGTGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGtgtgcggcgcgggcggcgcgggctacATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGTGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGTGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGtgtgcggcgcgggcggcgcgggctacATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGTGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACATCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTCGACCGCAAGCCGTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTGTAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACCGCAAGCCTTACGAGTGCGTCGTGTGCGGCGCGGGCTACATGCGCAAGCAGCTGCTCTACCACCACATGAACACCAGTtaCATGTTAATGGAAAGCAAAACCGACAAATTGCCTCACACGATATACGCCGCTACCGAAGGATCTGAAGAGTTTGGGAGTGATGATAAAAGCGATAAAGGCAGCATAACTCTAGTCAGAGCGAGTGAAGACTCGACCTTATTGACGATAAATAACGTGGATGATGAAGGGAAGGATGACGGGGTACTTATGGACCCCCTATCTACGACCCCCATGGGCGATGACCAGTCGAACGGCCCTTATCGGTTGGTGCCAATAGAACTTCCCGACGGCAGCAATGGCTGGGTTGCCATCAACGGGTAG
- Protein Sequence
- MNMHSGSRPFTCKVCHKSFASKYTQQSHMKTHLDRPRPYKCGQCDKSFFTTQNLSQHEKTHSNIRDFVCNICGKAFGTQHNLEVHGVVHSGSKPFVCGICGKGFARRAEVRDHMRIHTEDTLTLESGHVLYYREGEQTSQGGVGFLINKVLANNIVEISSVSSRVAYVILKLNRRYSLKVVQVYAPTSSHSDEEVEALYEDVVKAMDKTTKSYFTVVMGDFNAKVGVQERNESRVGPHGVGNRNRRGQMLVNFLERKGLFLMNSFFKKSAHRKWTWQSPDNVTRNEIDFIMSDRRDIFRDVSVINRFNTGSDHRLVRGSLNIDLQLERRRLMESTLRPRPHQPMAVTEKFQLELRNRFDLLETNDEVDQKYGDFVNVGVGSETLDLMQQRREMCSTLPDRQALNKLIKKRIRFDMRAASTRNIQDAIERNRGAKVFAKSLGRSHLTKLRTSDGRVVASKPEVLVEIERFYGQLYSAHAPKPAPTENANDKRAKLVRHYTDDLPDIDLGEISIALGQLKNNKAPGDDGERPFKCDICGACFTQRSNLHSHKRATHLDDKRYHCTECPKRFKRRRLLDYHMKASHTGERPLVCEICNATFVYPEHYKKHARIHSGEKPYTCEVCGKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRENRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSCDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGRRGLHAQAAALPPHEHQCKSFNSCDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSCDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGRRGLHAQAAALPPHEHQCKSFNSCDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNISRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSVSRSTRATTAHAPLRAQRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSRPQAVRVRRVRRGLHAQAAALPPHEHQCKSFNSRDNRNTHRFVHSDRKPYECVVCGAGYMRKQLLYHHMNTSYMLMESKTDKLPHTIYAATEGSEEFGSDDKSDKGSITLVRASEDSTLLTINNVDDEGKDDGVLMDPLSTTPMGDDQSNGPYRLVPIELPDGSNGWVAING
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -