Basic Information

Gene Symbol
RTase
Assembly
GCA_029955525.1
Location
JARPMR010000001.1:28316737-28329117[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-07 0.00033 22.2 0.0 3 44 622 663 620 664 0.95

Sequence Information

Coding Sequence
ATGTCCCAGCAGAACTTTATTAAATATCAGAGGCTTGATGCTAAGGTTAAAAGGTTAGTAtcaagaaagaaaagaagaagttGGACTCGATTCTGTGAATCCCTTAGTCCTAGATCCCCATCCACAATTGTATGGACAAACATTAGAAAATTCCGTCGGTCCCTCAACCACACTGATCCTACATCCAACAACCCCTTGGATTGGCTTAGTGACTTTGCTGATAAATTGGCTCCACCTTATGTCCCTAATATGGACTCATTTCCAAGTTATACACCAGCTCCTACGTCTGATGATATGGATGCTCCCTTTTCTTTTTCCGAGCTTCAAATTGCTCTTAATGGCTTGAAGGATTCAACCCCAGGGCAGGATGGCGTCCCTTATTCCTTTTTGACTAATCTAAATGACAAAGCTAAAATTCATTTCctcaacataattaataaatgttTTGAAACTGGTACCGTCCCTAACTCCTGGAAATCCCAAATAGTTATTCCTATCATTAAACCTGGTAAAAATCCCTTGGATTCAATTTCCTATAGACCCATAGCTTTGTCATCTACTTTAGCCAAAATAACAGAACATCTTCTTAAAAACCGTCTGGAATGGTTAATGGAAAGCAGGAATATTCTTCCCTCCTCCCAATTTGGGTTTCGGAAGGGTTTGAGTACTACTGACAGCCTCGGCATATTGACAACTGACATTCGAATAGCCTTCACAAAAGGAGAGTACCTTGCGGGCGTCTTTCTCGATATCGCTTCCGCATATGACAATGTTCTACTTCCGGTGCTCAGGCAAAAATTGCAAAAGCTGAGTATCCCGCCGAGGTTAATACATCTCATATGTAGCCTGCTGTTTTGCAGGTCTATTGTGGTCAAGCACCAGTCATCTTCTCTTCCCCCCAGACTCATCTGGAAAGGTCTCCCTCAAGGCTCAGTTCTCAGCCCTCTGCTATATAGCATATATACCCACGATCTTGAATTGTCTGTCAACAGTTTTTGTAACATCCTTCAATATGCTGATGATATTGCCCTCTACCACAGCTCTGGCAGTGTGGAGGAAATATCTTGTCGTATTAATTCTGCTTTGTATTACCTAGGCCAGTGGCTTTCTGATCATGATTACAGCATACCAAGTGTCCCAGAAAGTACAGACGATGAAGCAATGGATGGTATTGTCCCTCTCAAGCCTGCTGCTAGTATACCCAAGCATATTGACGTTTTGAAGAATGAAATCATATCTGAAAATGCTGAGGTGCTGTTTGATCCTATCATACCTCTGCCTTCACCAAGCAAAGTCCGTCCTAAGCTGCGTCCCGTTCCTAGATTGGCACCACTTCGAAGAAATAGTGTACAGGGTAGTGCAAGTGAATCAGAGGATGAGAGTCGACGCAGCCTGCTCAATTCAAAGGATCCACAAGCTCATGATGTGCACACCTTGCAGTCTTTACCCAATAGAAGCCGTCGTCGCGGAGACACTCGCCGCCGGAAGGCGATGCTGCAGCGGCGCGAGAACGCGAAGCGCGAAGCGGTCACCAtgcacgacctcatctcctACAACCCCACCTCCAACCCCCTAGTACTAACCGATGATGAAATTTTAATAGAAGAGGCCAATGAGAAACAGGAAGCGGAAAGGAAAGCAAAGGAAAAGGTGGGAGCTGTGACACCAGCAGAGTCACCGAATAAGTCGGCGGAGGCCGCTGCGGTACCGCAGATCAAACTGGGACCAAAAGGGGAAATTATTCTTGATGAACAGAGCTTgGTCATAAAACAAACAGGGAGCGATCGTAAAGTATCGTCCGTAGTGCACGAGGGCACCCAGGGTACTGGCGGGCAATACCGCAAGCAGAACCGCCGTGGCCCGAGCTGGACCGCGCCGGAAACCGTGCGGTTCTACCGCGCGCTCGCTGCGTTCGGGACTGACTTCACTCTCATGACGGAGCTGTTCCCAGACCGCACAAGGAAGCAGCTCAAAGTCAAGttcAAGAAGGAAGAAAAGACGAACGGCGCGCAAATAGACAAGGCTCTCTACGCCACGGATCAGTGCCAGTTCGACGTGGCGGAGCTCAAGGCGGAGTTCGAGGAGGAGCGCGCGCTGGCCGCCCGCCAGGCCGAGCTGGAGCGGGAGTGGCTTCACAGCGAGAAGCGCGCCGAGCGGGAGCGCCGCACAGCCGCCAGGGAGAGCGGCCTGAGGCAGAGTCGCGCAGCAAAGGCACTGGAAATAGCGATGGAACCCTTCCACCCGGGCGCGGTCACCGCAGATGATATTATAGTACTCCACAAGCAACGGATACAAAAATCCAAACAACCAGCACGACAGAAACCTCCAAAACTGGCTGCCATGAAATCCAAACAACCAGCACCACAGAAACCTCCAAAACTGGCTGCCAGGGCAGTAGTCGGTTCGACATCCAAACCCAAAGAAGACCCGGCCATGTTGCAAACATCGAGAGTCATAACAGTGCGCCGAGTGGTGTTAGTGTTGCCAAGCCCAGCTAAAAGACAACGGCACAGTTCATATACAATAACTCAACTTTGA
Protein Sequence
MSQQNFIKYQRLDAKVKRLVSRKKRRSWTRFCESLSPRSPSTIVWTNIRKFRRSLNHTDPTSNNPLDWLSDFADKLAPPYVPNMDSFPSYTPAPTSDDMDAPFSFSELQIALNGLKDSTPGQDGVPYSFLTNLNDKAKIHFLNIINKCFETGTVPNSWKSQIVIPIIKPGKNPLDSISYRPIALSSTLAKITEHLLKNRLEWLMESRNILPSSQFGFRKGLSTTDSLGILTTDIRIAFTKGEYLAGVFLDIASAYDNVLLPVLRQKLQKLSIPPRLIHLICSLLFCRSIVVKHQSSSLPPRLIWKGLPQGSVLSPLLYSIYTHDLELSVNSFCNILQYADDIALYHSSGSVEEISCRINSALYYLGQWLSDHDYSIPSVPESTDDEAMDGIVPLKPAASIPKHIDVLKNEIISENAEVLFDPIIPLPSPSKVRPKLRPVPRLAPLRRNSVQGSASESEDESRRSLLNSKDPQAHDVHTLQSLPNRSRRRGDTRRRKAMLQRRENAKREAVTMHDLISYNPTSNPLVLTDDEILIEEANEKQEAERKAKEKVGAVTPAESPNKSAEAAAVPQIKLGPKGEIILDEQSLVIKQTGSDRKVSSVVHEGTQGTGGQYRKQNRRGPSWTAPETVRFYRALAAFGTDFTLMTELFPDRTRKQLKVKFKKEEKTNGAQIDKALYATDQCQFDVAELKAEFEEERALAARQAELEREWLHSEKRAERERRTAARESGLRQSRAAKALEIAMEPFHPGAVTADDIIVLHKQRIQKSKQPARQKPPKLAAMKSKQPAPQKPPKLAARAVVGSTSKPKEDPAMLQTSRVITVRRVVLVLPSPAKRQRHSSYTITQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-