Basic Information

Gene Symbol
-
Assembly
GCA_029955525.1
Location
JARPMR010000027.1:6739984-6749734[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 5.9 8.4e+03 -1.5 0.0 30 45 112 127 109 128 0.84
2 8 2.9 4.1e+03 -0.6 0.0 20 31 226 238 215 240 0.71
3 8 1.6 2.3e+03 0.3 0.0 23 44 344 364 331 366 0.85
4 8 0.0053 7.4 8.2 0.2 22 42 440 459 412 462 0.88
5 8 0.026 37 6.0 0.1 13 45 569 611 565 612 0.76
6 8 0.00014 0.19 13.3 0.1 3 44 663 713 661 715 0.86
7 8 0.0074 10 7.8 0.0 19 39 845 872 836 874 0.78
8 8 7.7 1.1e+04 -1.9 0.3 3 14 1020 1031 1018 1036 0.84

Sequence Information

Coding Sequence
ATGGATAATAacatagtggttaagactgaAGTGCAACCTAATGGAGACATACTGTTATTCTACGTAGATGAAAACAATGGAAATCAAAGTATATTGGAATCCAATTACCAGCCTGAGCAATTGCTACCAGATGCTTACATGGTTGAAGATTTTGTTGATGAGGATTCACCGGACGAGTTTGAAATAGCCCAAGCAACTGAACAAATTTCCAGGGAGAAATGGCTGGAGGATGATGTTAAACGACTCATTACCTTCTTCATAGATAATAAACCAACATTCCTTAGTGGCACCAcaaagaaaattcatttatggGTTGTAGCATGTAAAACAATGCTAACAGATAAAACACCGATTTCTTGTGAAGCTAAATTCAACACTTTAAAGAAAAAGTATATGCAGCTGTGTATAGATAAACAAAAAGGTATAATCATCAACTGGCCATTCTTCGATCTGTGCCATCAGGCCTTTCATGATGACCCTACAGTGATAACTTATCTGAGAGAATCTGGCCAAAACACGTTCGTACTCAACCTGCCCACGCAAAACACGGTCAATCACGAAGGAGTTTTTGTTGTAAAGAAAGTGATTACAGAGCATAATAGAGATGAAAAAGTTGAATTGATGctcaatttgtttttaaaacataaGACCTTAAACCAAAAAGGTCATAATATGCCAAGGGGTACTTGGGATGCTATAGCAACTGAATTAGGGGAAGGAGACGCTGATTATTGGCATAAACGTTTCTTAAATTTCAAACAGCATTATATAAGGATGGTTTATAAACGTAACGAAATCGGTTCTGATGCGATAAGCTGGCCGTACATGGGATATTTTGATCAAATATATGGCGACGATTTGGACTTTCAGCAAAAGTTTTGCCCGCCAGAAGATAATAAAGTTGATGTCACCGTAATGATAGAGAGTTCAGACAAACTTTGGAATGATGTGGAAAGAACTTTCTTAgtcaaatattattttgactGTTTCAATGAATTCCAAGATCATACTATACCGAAAAAGTTCCTATGGCAGGAAGTAGGTAGATTAATAGATAAAAGTTCTGATACGTGCAAGCAAAAGTACGAAGAACTCAAGAATGcccatttcgataaaattttagctgatgtatataatttatttgaaagaaTACCTTTGGATATACTATTCGATaatattatagcaaaggaaGCCCAAATTGAAAtagataaaaaagttgaaactCCAGAAATATGGAAGGCTGAACAAATAAATGACTTAGTGCaatttgtatataataatagtgAAATGGTAAAAGATCCTGTATGTTATTATGTATGTTGGGCAGTACTTGCAAAGAAATTTCAAAGAAGTATTtattcatgcaaaaatcaatGGGATGAATTAACAGCAGTATATAAATCAGCTTTAGATGACAAGAAGGAATATCCAGATATGCAAATAACTTGGAGATACATAGATTTGTTTGATAGAATATTTGATTATGGTATGGACACAAATCTATTTGATGGTTATAAGAAAAGTGAAAACAGTACTCTGGTTGACAAACCTTTGAAAGTAGGAGcTAAAAGAATAATAATCAAAAAGGACGACGAAAATGTACTTGAAAATGGTCAAATAACCGACGACGAAGAATCTTACGACGAACGAGGCTTCACAAAACACAGCAAAAAGCGAAACGGCGATGAGAAAGCCTTTAAGATACTTGAGTATTACCTCAAACATAAGGAGAAGTTCGCCTCATCGTATTATAAGAAACTCGCTTTGTGGGATGTTTTAGCGAAACAAATAGGAATCTCTGCCTCTGAATGTGCACATAGATTTCGGAACTTTAAGCAGGTTTACACCAGTTACGTtcaacgtgaaataaataaaccggAAAAACCAATAATATGGCCCTATTACACCTTATGCAAAAAAGTGTTTGGGTACAGAGCCATCAAAACTAAGCTCAAAAACGGAAAAAATGACTCAGACGATGCCGAAGACTGGTCTGCAAAGGAAATCAAGCAAGTCATTAACTATTTTGCAAAAAATTACTATACCTTTATCGATGCGGTTGAAGATAAAAACAAGTGGAATAACTTGGCGCAGGAGTTGGGCAGATCGGCCTCAAGTTGTTGCGACAAGTTTCTTGAATTGAGGAAGTCTTATAGAAAGTTGAAAACTATGAAGTCAAgGAATCCAGATGTAAAGGTATCGTGGAAGTATTTCAATTTGATGGACGATATTTATAAGAGAGGAGCTCAAGATACTCAAGATGTAGAGGTTATAGAGCAAATGGATGTTGATCAGAATGAATATGAGTATGAGGAACACACAAATCAGGATGaTGACGATTTTCAATGCATCATTGTTATACCAGAGGGTGAAGACGTGAACAATGCACAGTTTATACTGCCGGATCAAGATCAGATACCAAATGATATGAAAGATATAAATGTCAAAACGGAATACAAACAAATCATTACAAAGTGGAACCGACGGAGCAAAACAAGGCTCCTTAACTTGTACTTAAATTATCTAAAATCTCATAAAGGTCAAGAGATGAATTCAAGAGAAATGTGGACAGAAATAGCCTCGAAAATGCACGAAAAAACACCGATATCCTGCAAAAAAATGACCACAAAACTCAAAAAACTTCTTAACGAACCTAAAGTGACGCCATACCACAAGttgttgaaaaaaatttcagctGTAAAACCCAAATTCAAAAAAACATCCACAAATCAAGATTTGGATTCAATCAAGACTTTCAAAGACGTACAAATCGATGACGACAAAGTCAATAAAGCTTTGCAGTATTACTTGCAAAATTTAGAAGATTTTGTGAGCCCAAAATTTGACAAGAAATATTTGTGGACGGAACTTGCGAAATATATTGCAGAGCCGGTcatcaaaatttttaataaaataaactattttaaacttaattttaatacGGAGTTGTTTACGCCATTTCGGGATATACTACAAGAAATCATTTTGAAAGAAAATGCATTAAAGAACGCTATGAGTAACGACCTACCGACTTTGGAAACTGATGATGTTGAAGAAACGTGGTCGGACGTAGAAATCCAACGTTTGTTAACGTGGTATCTAGCCCATTTAGACAAATTTAAGAACCCCAAATTCGTAAGGAGCTATCTATGGATGGAGGCTTcagatattttgaaaaagagTCCTTTGGTTTGTTCGAAGAAAATGTTGGAAATAAGGTCACAATACAGAACTATGGTCAAGGAGAGTCCAGAGACATTGGAAAATTGGAAGTTTTATAATCTGTGTCAACGTATCTATGGTACAGGGAAAAAGAGCGCCAATAGTGATAATTAA
Protein Sequence
MDNNIVVKTEVQPNGDILLFYVDENNGNQSILESNYQPEQLLPDAYMVEDFVDEDSPDEFEIAQATEQISREKWLEDDVKRLITFFIDNKPTFLSGTTKKIHLWVVACKTMLTDKTPISCEAKFNTLKKKYMQLCIDKQKGIIINWPFFDLCHQAFHDDPTVITYLRESGQNTFVLNLPTQNTVNHEGVFVVKKVITEHNRDEKVELMLNLFLKHKTLNQKGHNMPRGTWDAIATELGEGDADYWHKRFLNFKQHYIRMVYKRNEIGSDAISWPYMGYFDQIYGDDLDFQQKFCPPEDNKVDVTVMIESSDKLWNDVERTFLVKYYFDCFNEFQDHTIPKKFLWQEVGRLIDKSSDTCKQKYEELKNAHFDKILADVYNLFERIPLDILFDNIIAKEAQIEIDKKVETPEIWKAEQINDLVQFVYNNSEMVKDPVCYYVCWAVLAKKFQRSIYSCKNQWDELTAVYKSALDDKKEYPDMQITWRYIDLFDRIFDYGMDTNLFDGYKKSENSTLVDKPLKVGAKRIIIKKDDENVLENGQITDDEESYDERGFTKHSKKRNGDEKAFKILEYYLKHKEKFASSYYKKLALWDVLAKQIGISASECAHRFRNFKQVYTSYVQREINKPEKPIIWPYYTLCKKVFGYRAIKTKLKNGKNDSDDAEDWSAKEIKQVINYFAKNYYTFIDAVEDKNKWNNLAQELGRSASSCCDKFLELRKSYRKLKTMKSRNPDVKVSWKYFNLMDDIYKRGAQDTQDVEVIEQMDVDQNEYEYEEHTNQDDDDFQCIIVIPEGEDVNNAQFILPDQDQIPNDMKDINVKTEYKQIITKWNRRSKTRLLNLYLNYLKSHKGQEMNSREMWTEIASKMHEKTPISCKKMTTKLKKLLNEPKVTPYHKLLKKISAVKPKFKKTSTNQDLDSIKTFKDVQIDDDKVNKALQYYLQNLEDFVSPKFDKKYLWTELAKYIAEPVIKIFNKINYFKLNFNTELFTPFRDILQEIILKENALKNAMSNDLPTLETDDVEETWSDVEIQRLLTWYLAHLDKFKNPKFVRSYLWMEASDILKKSPLVCSKKMLEIRSQYRTMVKESPETLENWKFYNLCQRIYGTGKKSANSDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-