Basic Information

Gene Symbol
-
Assembly
GCA_029955525.1
Location
JARPMR010000021.1:5901327-5907990[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.00077 1.1 10.9 0.1 18 45 30 63 1 64 0.75
2 5 0.018 26 6.5 0.0 32 45 112 125 102 126 0.85
3 5 0.019 27 6.4 0.0 32 45 143 156 134 157 0.86
4 5 0.018 26 6.5 0.0 32 45 205 218 195 219 0.85
5 5 8.9 1.3e+04 -2.1 0.0 24 40 244 261 239 264 0.81

Sequence Information

Coding Sequence
ATGACACGGGACGAGGTGGCGCTCCTGGTAGACCTGGTGGTGAAGAGGCCCGCCATCACCATTAAGGAGACCAATGCTGCCAACAACAAGCTGAAGGAGGACGCCTGGAGTTCTTTGGCGGTGGAATTCAACAAGATCAGCGACCAGGGCCGCAGCAAGGAGCAGATAAAGCTGAAGTGGGACAACTTGAAGAAGGCGGCCAGGAAGAGAGTCTCCCAACGACCAGGGCCGCAGCAAGGAGCAGATAAAGCTGAAGTGGGACAACTTGAAGAAGGCGGCCAGGAAGAGAGTCTCCCAACTTTGGCGGCGGAGTTCAACGAGATCAGCGACCAGGGCCGCAGCAAGGAGCAGATAAAGCTGAAGTGGGACAACTTGAAGAAGGCGGCCAGGAAGAGAGTCTCCCAATTCAACGAGCTCAGCGACCAGGGCCGCAGCAAGGAGCAGATAAAGTTGAAGTGGGACAACTTGAAGAAGGCGGCCAGGAAGAGAGTCTCCCAACGACCAGGGCCGCAGCAAGGAGCAGATAAAGCTGAAGTGGGACAACTTGAAGAAGGCGGCCAGGAAGAGAGTCTCCCAACTTTGGCGGCGGAGTTCAACGAGATCAGCGACCAGGGCCGCAGCAAGGAGCAGATAAAGCTGAAGTGGGACAACTTGAAGAAGGCGGCCAGGAAGAGAGTCTCCCAATTGGACAAAGATGAAGCCGAGATGGTGCCGCTGGGAGACATCCTGGACCGCGTGTCGGATCTGTTGGGGTACGGGAAGCCTGAGCCGCAGTGCGACAGCGACTGGATCGTGGTGGACAGCGTGGGGGAGAGCTGCTCCAGCACGGgTAAAAAAGAAGGTTCTGGAGTCATAGAGAGAAACTTGGCCATAGCGAGATACTACGAAAAGAAAACAGAAAAATTGGAAATAGAAATACAATTGTTGAAAATGCAATTGAATAGGCAATGCAATTGTGGCGGTAGTTTAAAAGTTGACAATCAAAATAATGACAGTGACATCATGGATAGAATCAAAAAACTGAATGGGAAAATTAATAGCAAAAAACTTAGAATTAAAAACAACTTAGATTGTAGAAATACAATCGATAGTAATAGAGTTCAAAATGATTGTATTAATAAGGGCGAGGATTCTGATAGTTATAGCAATGTAGATCAGTCTGATAGTAAAATTAATGTATATATAGATATTGTTAAGCAAGAGCCAGAATAA
Protein Sequence
MTRDEVALLVDLVVKRPAITIKETNAANNKLKEDAWSSLAVEFNKISDQGRSKEQIKLKWDNLKKAARKRVSQRPGPQQGADKAEVGQLEEGGQEESLPTLAAEFNEISDQGRSKEQIKLKWDNLKKAARKRVSQFNELSDQGRSKEQIKLKWDNLKKAARKRVSQRPGPQQGADKAEVGQLEEGGQEESLPTLAAEFNEISDQGRSKEQIKLKWDNLKKAARKRVSQLDKDEAEMVPLGDILDRVSDLLGYGKPEPQCDSDWIVVDSVGESCSSTGKKEGSGVIERNLAIARYYEKKTEKLEIEIQLLKMQLNRQCNCGGSLKVDNQNNDSDIMDRIKKLNGKINSKKLRIKNNLDCRNTIDSNRVQNDCINKGEDSDSYSNVDQSDSKINVYIDIVKQEPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-