Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_029955525.1
Location
JARPMR010000006.1:25204604-25219839[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.4e-07 0.0013 20.2 0.0 2 35 291 327 290 337 0.85
2 2 2.9e-09 4.1e-06 28.3 0.0 2 43 372 418 371 420 0.86

Sequence Information

Coding Sequence
ATGCGGTGCGTAATTTTGTTGCTTAGCGCTACGTTTTTAAGCGTTGCGGCGTGGGACGATGATGATTTAGAAGTGTTTGACGCGGTCGATGAAGTGAACCAGAATTTTTATGAACTGTTAGGAGTTACGCAGgaTGCTTCACCATCAGAGATAAAGTCTGCCTTCAAGAAACTAACGCTGAAACTTCACCCGGACAAAAATGATGCACCAGATGCAGATGTGCAGTTTAGAAACCTGGTGTCAGTTCACAACATACTGAAGGATCCAGGGAAACGAGAAAAATACAATGAAGTGCTCAAGAATGGTCTTCCCAACTGGCGCTCTGCGGTGTACTATTACCGCCACGTGAGGAAGATGGGTCTGGCAGAGGGCTCCATCatcctcttcatcatcatcacattCGGTCAGTATGCGGTCGGATGGGCGGCGTATGCGGAAAAAAGATATACTGCCGAACAAATACTGAACAGTAGAGGTAAAAAACATTTCAAGAAATCTGGCTTCGACACTGGTTTAGCAGAAATATTGGAACAGTTACCCAAGCCTAGCATAAAAGACACACTGCCCTTCCAAATACCTCGCGCTATATGGTGGTCCATAACCAGCATCCCTCTTGCTATAATGGAGTTGAAGAGGAGAAGGAAAGAGCTGcaagaagaagagaaaaaaagaaagaagaaGGAAGAAGAGgaggcggcgcgggcggcgcgcgaggcggcggcggcggcggagtaCAAgctgggcggcgcggcgcggcggcggcgagcCTTCGTGCCGCCCGAGCGGGACTGCCTGCTCGACCCCGCCGCCGAGCCCGACGACGCGCCCATACCAGTACAACTCAAACCTGCCCCGCCAGTGGTGACGGGCGGGCTGTGGACGGACGACGACCTGGCGGAGCTGGTGCGGCTCGTCAAGAAGTACCCCGGCGGCGCGGCCGAGCGCTGGGAGCGGATCGCCGACGCCATGGGCCGCAGCGTGCCCGAGGTCACGCACATGGCGCACAAGCTCAAGGACAACTGCTACAAGGTGCCCGGCCAGGACGCCGCCGAGGAAGCGCCGCCCGAGCCGCCTAAGAAGGTGAAGACGCGCAAGGCGGAGGAGAGCCACGGCGGCAACTGGTCGCAGGCGCAGCAGCGCGCGCTGGAGGCGGCGCTCGCGGCGCACCCCAAGGGCGGCGCCGGCGACCGCTGGCAGAAGATCGCCGCGCAGGTGCCCGGCAAGACCAAGgaggAGTGCATGCAAAGGTGTAAGTATTTATCCGAATCGCTGCGAAAACAGAAGCAGAAAGAAGAAGAGGAACAGAGAGAGCAGGAGTTACAGAGAGAGAGCGCAGAAGCAGTCAGTGAAAGTGATAATTAA
Protein Sequence
MRCVILLLSATFLSVAAWDDDDLEVFDAVDEVNQNFYELLGVTQDASPSEIKSAFKKLTLKLHPDKNDAPDADVQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAVYYYRHVRKMGLAEGSIILFIIITFGQYAVGWAAYAEKRYTAEQILNSRGKKHFKKSGFDTGLAEILEQLPKPSIKDTLPFQIPRAIWWSITSIPLAIMELKRRRKELQEEEKKRKKKEEEEAARAAREAAAAAEYKLGGAARRRRAFVPPERDCLLDPAAEPDDAPIPVQLKPAPPVVTGGLWTDDDLAELVRLVKKYPGGAAERWERIADAMGRSVPEVTHMAHKLKDNCYKVPGQDAAEEAPPEPPKKVKTRKAEESHGGNWSQAQQRALEAALAAHPKGGAGDRWQKIAAQVPGKTKEECMQRCKYLSESLRKQKQKEEEEQREQELQRESAEAVSESDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00801804;
90% Identity
iTF_00954410;
80% Identity
-