Basic Information

Gene Symbol
-
Assembly
GCA_029955525.1
Location
JARPMR010000001.1:15148644-15160086[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.76 1.1e+03 1.3 0.0 22 44 264 287 259 289 0.83
2 5 1.1e-09 1.6e-06 29.6 0.1 1 45 295 341 295 342 0.95
3 5 3.4e-09 4.9e-06 28.0 0.1 2 43 348 393 347 395 0.95
4 5 1.2e-09 1.7e-06 29.4 0.0 1 43 400 442 400 443 0.98
5 5 4.1e-10 5.8e-07 31.0 0.0 4 44 453 495 452 496 0.97

Sequence Information

Coding Sequence
ATGAGTGATCTATATGATTTCGATAGTGACGACGAAGAAAAAGAAATGCAAGATTTGGAAAAACTCTACGCTTTAATAGAAGAACTAAGCAGCGATGAGTCCAGGGCCGGGAGCAGCGCAGCGTCCGTACAGCATGACGCCTCTACAGCCTCCACGAGCTACGGGGAGTATTCCAAAGTGGAGACTGCTCTAGCGCTTAATAGTATGTGTGCTGAATATGAAATGCAAGATTTGGAACAACTCAACGCTGTAGTACCACCATTGAACAGCGAGGAGCCCAAGGCCGACAGCAGCGCAGCGTCCGTGCCGGATGACGCCTCTACAGCCGCTGCGAGCGTCGACAGCGCCTCCACGAGCTTCTATTCCAAAGTGGAGACTGCTATAGCCGAAGTTCAGGGCGTTTCCGAGAACAACCAGCCGGAGAGAACGCAAGGACACACCTATGCCAACTGTGGGAAGCCATATTTTAAAGACAAAAATGGTTTTGCTGCCCCAGACAACGAGGACACCTTGCTGATGAAAAGATCTGAGATGTACGACTTCTCTAGCATAGTATCGCGATCAGGATGGACAGTTAAGGACAAGAGACAACTCTCGATGATCATTCATCAGATGTCGACCGacataaagaagaaaaaactgTATTCACAAATAACACAATTGCAGCATGAAAACAAGTTGCTGAAATCAAAAAAAAACAGTAAGATGATAGCGCAACTCAGAAAAGAGCTCGCTAATGTCCATAAAAAGCCTCTCAAGTCTCTAGCTCTTCCCATAGAAGAGGAGTACGACTGGGACTTCATTGCAAGCAAATTGAGCAAGAGGCACAACGCAAACGAGTACAGAACCTTTTGGAAAACATTTTTACATCCATCTATAAATAAAAAGGCTTGGACCGAATCGGAACATGTAACTTTGCATAATATTGCCTTTGAAAAGAATTTGCAAGATTGGGATACAATAGCAAAGGAGTTGGGCACTGGCAGATCAGGGTACCAGTGTATTGTTTACTTCCGCAACAATATGAAGAACACATTAAGTAAAAAATGGACGAAAGAGGAGGAAGAGTATCTTATGCACTTGATCGAGTATTATAGACAGGGTAACTATATTCCATGGGGGAAAGTAGCTGCGTCAATGGAAAATAGGACCAAAGTACAAGTTTATAACAAGTTTGCCCGCCTCTCTGAACTTAGAAAAGGCAAATTTCTTCCCGAGGAAGATTCTGTTGTACTAACTTGTGTCAAAACTTTTGGACCAAATTTTAGAAAAGTAAGTGAATATCTTTACGGTCGCTCAGTAATTCAGTGCCGGAAACGATACCACATCCTGGCCAAGAGACAATGTTCTGCAATTTGGACTAAGGATGAAGATCGGAAATTAGTTCAGTTGATGGCTAATCAAGATtcatcaaataatttttcaaatgtgGCAAAATACTTTCCCGGTAAGGATAGGGTAAACATTAGATCTAGATACTTGACTTTAAGTAAATGGATGAGGCAAAATCCTAATACAGACATCAGCAATGCTCCGAGGCTTAAAGTGAGATGTTTGTGCCATGGCAAGGCTGCAAAGGATCTAAATACAGCTATAAAGAACCTGAAAAAACGTTTACAGAGTGAAGTAATTGTGAAAAAGAAAACAAGGATTACAAAAGATTCGCCGGAAGATGATATAGACGATGCAATAGTTGCCTTAGTTGCTGCTAACCAGGTGTGGCTGAAGGAAGAGCAAAAGCTACAGGCAGATCAGGAGGAACAGGGCAGCAATAGTGCAATTAACTGTGGAGAAAAATGTGATGTTACATCTCTacaaaaattacttattttgtTGAAAGCAAAGTTGAATCTACAAAAGTTTGCAAACAGTCCATTGCATAATAAGTACCAAGGCCTGTTTGATACAGAACCTGGACCGAGCACTGTTCAAGTCAGGTCGGATTCAAATAAGGAAGCAGTGAGGAACCTCAAAATTGAGAATAAGATAAATATTTGGGGTAATGTTTTACCGAATCAGTTATCATATGTTCTTCCACCACACTATGCCACAATCACAGGCTGCAGGCAATTGTTGGCATATTTCATGAAATCTAAAGCGGGGAGTGATGAAAGaaaATCTATAGAATGGAGGTCTTTAATGATCTCAACGTTGTTGGGCATGCCGGGCGGAGTCCTACTCTTTATACCAATTTACCATCCCTTACATGACGGTCTGAAGATCCATTCAGAAGTGACGTTTttcttattatttgctgttttCGCTACACTCGTACTACATGGAATTCTCAAAGATCGTCCATATTGTAATGAAAAGCTTACAACCATCGACTACGTGCTAATTCTTCAACTGGCAGTACACTACGTAGCCTATTGGATGTTTGTGGTGTTTTTCGATCCTGCAAAGGAGGTTTCAGTGGGTCTGCACGAACCAGTTGGACCATGTAATGAAACAGCCTCTCTCACAACACCTTTTGGACAGACTCTCTACAAAAGAAAATACTTCTGCGCCGATGACTACGACGAGGGATATTTTGATTTTAGCTGCGTGGGCGGAGCTAAGCCACCGATCGGTGCCACGTGGTATACTATTTGTGGAACACCGTTCCAAAACCGGGCCGAGTACATAGCAGTGATCACGGGAATATTATTCTGTGCTGCTGGAATCTTCCGTGGAATATATTTCACCAAGGCCACGCCCCCATCTATAGCCAAAAAGCTTAAACTAAAATGA
Protein Sequence
MSDLYDFDSDDEEKEMQDLEKLYALIEELSSDESRAGSSAASVQHDASTASTSYGEYSKVETALALNSMCAEYEMQDLEQLNAVVPPLNSEEPKADSSAASVPDDASTAAASVDSASTSFYSKVETAIAEVQGVSENNQPERTQGHTYANCGKPYFKDKNGFAAPDNEDTLLMKRSEMYDFSSIVSRSGWTVKDKRQLSMIIHQMSTDIKKKKLYSQITQLQHENKLLKSKKNSKMIAQLRKELANVHKKPLKSLALPIEEEYDWDFIASKLSKRHNANEYRTFWKTFLHPSINKKAWTESEHVTLHNIAFEKNLQDWDTIAKELGTGRSGYQCIVYFRNNMKNTLSKKWTKEEEEYLMHLIEYYRQGNYIPWGKVAASMENRTKVQVYNKFARLSELRKGKFLPEEDSVVLTCVKTFGPNFRKVSEYLYGRSVIQCRKRYHILAKRQCSAIWTKDEDRKLVQLMANQDSSNNFSNVAKYFPGKDRVNIRSRYLTLSKWMRQNPNTDISNAPRLKVRCLCHGKAAKDLNTAIKNLKKRLQSEVIVKKKTRITKDSPEDDIDDAIVALVAANQVWLKEEQKLQADQEEQGSNSAINCGEKCDVTSLQKLLILLKAKLNLQKFANSPLHNKYQGLFDTEPGPSTVQVRSDSNKEAVRNLKIENKINIWGNVLPNQLSYVLPPHYATITGCRQLLAYFMKSKAGSDERKSIEWRSLMISTLLGMPGGVLLFIPIYHPLHDGLKIHSEVTFFLLFAVFATLVLHGILKDRPYCNEKLTTIDYVLILQLAVHYVAYWMFVVFFDPAKEVSVGLHEPVGPCNETASLTTPFGQTLYKRKYFCADDYDEGYFDFSCVGGAKPPIGATWYTICGTPFQNRAEYIAVITGILFCAAGIFRGIYFTKATPPSIAKKLKLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-