Basic Information

Gene Symbol
-
Assembly
GCA_029955525.1
Location
JARPMR010000025.1:17330648-17333011[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.0024 3.4 9.3 0.2 22 46 237 262 233 262 0.92
2 5 6.1e-07 0.00086 20.8 0.0 1 39 268 308 268 313 0.93
3 5 2.3e-09 3.2e-06 28.6 0.2 3 43 323 367 321 369 0.94
4 5 2.1e-11 3e-08 35.1 0.0 1 43 374 416 374 418 0.98
5 5 3e-10 4.2e-07 31.4 0.0 4 44 427 468 426 469 0.98

Sequence Information

Coding Sequence
ATGAGTGATTTAAATGAAAGTGATTTCGATAGTGACGACGAAGAAAATGAAATGCAAGATTTGGAAAAACTCAACGCGGCAATTTCCGAATTGAACAGCGAGGAGCCCCAGGCCGGGAGCAGCGCCGCGTCCGCGCCGCATGACGCGTCTGCGGCCGCCGCGAGCGTCGCCGGCGCCGCCTCGAGCTACGGGGAGTATTCCAAAGTGGAGACTGCTCTAGCGCTCAATAGACTGTGTGCTGAAAAATTGCGGCGACTTGAATCTACATTGCGAGGGCGGTTGGTCGAGTGTCGCCGAAGGCTAGCCGAAGTTCGGGGCGTTTCCGAGAACGAGCAGTCGGAGAGAACGCAAAGATCCACTTATGTCAACTGTGGGAAGCCATACTTTAAAGACAAAAATGGTTTTGCTGCCCCAGACAACGAAGACACCTTGCTGATGAAAAAGTCTGGCATGTACAACTTCTCTAACATAGTATCAGTCCGTGCATGGACAGTCAAGGACAAATCCGATCTCTCGGCGATCATTCATCAGATGTCAAGtgagataaagaagaaaaaactgCATTCACAAATATCACAATTAAAGCGTGAAAACAAGTCTCTGAAATCAAAGAAAAACGGTAAGATGATTGCGCAACTCAGAGAAGAGCTCGCTAACGTCAAGAAAGAGCCCCTCAAGTCTCTGGCTCTTCCCATAGAAGAAGAGTATGACTGGGATCACGTTGCTAACAAGTTGAAAGGGAGACACAACGCAAACGAGTGTAGGTgcttttggaaattatatttacatccatctataaataaaaatagttggtCCAAATCTGAACAATTAGCTTTACAAAAAATCGCCCTTGAAAGGGATCTGCAAGATTGGGATGCGATAGCCAAAGAGTTGGGTACTGGCAGATCGAGCTACCAGTGTTTTATTTACTTCAAGGCCAATATGAACAACACCATTAAAAGTAGGAAATGGACAAAAGAGGAGGAAGAGTACCTTATGCGCTTGATCGAGTATTATAGAGAGGAAAACTATATTCCATGGGGGAAAGTAGCTGCGTCTATGCAGAATAGGACCAAAGTACAAGTTTATAACAAGTTTGCCCGCCTCTCTGAACTAAGAAAAGgcagatttcttccagaagaaGATTCCGTTATACTAACTTGTGTCAAAACTTTTGGGCCAAATTTTAGAAAAGTAAGTGAATATCTTTACGGTCGCTCAGCAACTCAGTGCCGGGAACGATACCGCATCCTGGTCAAGAGACAATATTCTGCAATTTGGACGGTGGATGAAGATCGGAAATTAGTTCAGTTGATGGCTAATCAAGATTCAACTAATTTTTCAGATGTGGCAAAATACTTTCCCGGTAAAGATAGGGTGCACATTAGATCTAGATACTTGACTTTATGTAGATGGATGAGGCGAAATCCTAATATAGACATCAAGCACGCACCGCGGCGTGCAGTGAGACGTTTGAGCCATGGCAAGTCTGTAGGCGATCTGAATAGAGCTATAGAGAGCCTGAAAAAACGTTTAGAGACTGAAGTAATtgtgaaaaagaaaacaaagattACAATAGATTCACCGGAAGATGTTATAGATGATGCAATAGTTGCCATAGTTGCCACCAAACACACGCGGCTGCAGGAGCTGCAAAAGCTGCAGGCAGAGCAGGAGGAGCAGGGCAGCAGTAGCGCAGTTGTTAGCGGAGGAAATTGTGACGTTAAAGTTCTACAAAAGTTACTTATTTTGTTGAAAGCAAAGTTGAATCGACAAAAGTTTGCAAACAGTCCATTGCGTAATACATATCAAGGCCTATTTGATACAGAACCAGGACCGAGCACTGTTCAAGTCAGGTCGTATTCAAAAAAGGAACCAGTGAGGAACCTCAAAATTGAGAATAAGATAGACATTTGGGGTAATGTTATACCGAATCAGTTATCATATGTTCTTCCACCACACTACGCCACAATCACAGGCTGCAAGCAATTGATGGCATATTACATGAAATCTCAAGCAGGGAGTGGTGAAACATCATCTACGAGCATTATGATTAAAAGGAATATGTTGCTCAAAGAGCAAGTTGATATTCTGATGGAGCGATTTATTAGCTTGTTCCTCTGGCCAATGCTGATGTCAAACGCATCCCCAGAAGATTGTAAGGTTACTAATACAGTAAGTGTGCCTTCTACATCAAGATCTGCACGACAATTTGTTGCCTTTGAGAAAGCTGACTATAATTTAGTATTGCCACTGCCGAATAAAACAGAAAAGATTGATAATGAAGACACCATAGACTTAGTAGAGTCGGTGGACCGCAGCATAATTGATGTTGACGATAGTTGTTTTGGCTCCATTAATTAA
Protein Sequence
MSDLNESDFDSDDEENEMQDLEKLNAAISELNSEEPQAGSSAASAPHDASAAAASVAGAASSYGEYSKVETALALNRLCAEKLRRLESTLRGRLVECRRRLAEVRGVSENEQSERTQRSTYVNCGKPYFKDKNGFAAPDNEDTLLMKKSGMYNFSNIVSVRAWTVKDKSDLSAIIHQMSSEIKKKKLHSQISQLKRENKSLKSKKNGKMIAQLREELANVKKEPLKSLALPIEEEYDWDHVANKLKGRHNANECRCFWKLYLHPSINKNSWSKSEQLALQKIALERDLQDWDAIAKELGTGRSSYQCFIYFKANMNNTIKSRKWTKEEEEYLMRLIEYYREENYIPWGKVAASMQNRTKVQVYNKFARLSELRKGRFLPEEDSVILTCVKTFGPNFRKVSEYLYGRSATQCRERYRILVKRQYSAIWTVDEDRKLVQLMANQDSTNFSDVAKYFPGKDRVHIRSRYLTLCRWMRRNPNIDIKHAPRRAVRRLSHGKSVGDLNRAIESLKKRLETEVIVKKKTKITIDSPEDVIDDAIVAIVATKHTRLQELQKLQAEQEEQGSSSAVVSGGNCDVKVLQKLLILLKAKLNRQKFANSPLRNTYQGLFDTEPGPSTVQVRSYSKKEPVRNLKIENKIDIWGNVIPNQLSYVLPPHYATITGCKQLMAYYMKSQAGSGETSSTSIMIKRNMLLKEQVDILMERFISLFLWPMLMSNASPEDCKVTNTVSVPSTSRSARQFVAFEKADYNLVLPLPNKTEKIDNEDTIDLVESVDRSIIDVDDSCFGSIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01091854;
90% Identity
iTF_01091854;
80% Identity
-