Oiva043374.1
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- clz9
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000032.1:1988639-1991047[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-07 3.7e-05 24.8 0.0 5 40 2 38 1 40 0.91
Sequence Information
- Coding Sequence
- ATGTTAAAACTTGCTTGCGAATCAGTAAAATCAGGCCAAATTTCTTCACGAGATGCGCAACGACAATTTGGTATCCCAAGACGCaccatagaaaataaaattaaaaacaaacatactAAGCCAGTTGGGCATCCCACAGTTTTATCAGATGCAGAAGAGACCCAAATTATAAGAGTATTGCAAGCATCTAGCGATTTTGGCTCCCCACTAACTAAAGTGGACCTGAAGCTTTTAGTTCATGgatatctaaataaaaatagtcGCGGTGATAAGTTCAAGAATAAGATTCCTGGAGATGCATGGGTTCAAGGCTTTTTGGCGCGACATGCTGATGAATTGAGTCTAAGAATTACTCAAAATATTTCCAAGGCAAGAGCTGAAAAGGGGCCCGAAGAAATAGCGGAATACTTTGAAAATTTAAGCATAACATTAAAAGACATACCAGCAGAAAATATAGCCAACTTTGATGAGACGAACCTTTCAGACGATCCAGGTTCGTCGAAGTGCATCTTTCGGAGGGGAGTTAAGTATCCCGAAAGAGTAGCCAATTCAACAAAAGGAAATATATCCGTCATGTTTACTGCTACCGCAAGCGGTAAACGTCTTCCATTATACGTTGTTTACAAGTCAACAACTTTATATTCAGAATGGATTAGTGGAGGACCACCAGAAACCAGATATAACTGCACTAAATCTGGGTGGTTTGACAGCGCTATATTTGAGAATTATTTTGAAACCATAATCCTCCCATGGGCGCAAAAGATTTCAGGGACTAAAGTTGTCATTTGCGACAACCTTTCTAGTCATTTAAGTATTAAAGTAGTAGAGTTATGCCAGCAAAATGacatcaaatttatttttatcccTCCGAGATCAACACATATCACCCAGCCGCTAGACGTGGCATTTTTTGGGCCCCTAAAGAAAGCCTGGCGTAAAATTTTGTATCAGTATAAACTTCGTAATCCAAACCAAacgaatttaaataaaaaacattttccgAAATTGCTTAGTGAATTAATTAATGCCATTCAGATTAGGGAAGcagagaacataaaaattggaTTTAAAGCAACAGGAATATTTCCATACAATCCGCAAGAAGTTCTAAAGAATATCCCTGAAATGCAAGAAGAAATATTATCATATACAATTGATCAAGCATTGGTAGACTATTTAAAAGAAACCAGAGCGCCACGGCCGATGCtagttaaaagaaataaaaggaTTAATTGCGAGCCAGGGAAATCGGTGACGGTTTTAGATTTAAATATTGATTCTTGCAAAGGTAAAGCAATAAAGAAATCGGAAAAAAGACAAAGAAAAACTAAGGACTCTTTATTTTTGGATGAAGAAACTGGCCTCTTCGTTGCTAAAACTGatctaattttaaataaagatgTCGACAAAGATCAAGAGAGCTATTTAGATTTGGAAGGGTCTTTTTTTATCTCCCAGTTTCAAGATACTTATTCTCCTGAAAGTCTCAACAAGATTTGCATAACTATAATTAACTCCTACTTAAGCCAATTACACAGTAGCGAAAAACATAATGAAAAGATTTGCGAAAAAACGTTTACAGATTTCTCACATTTTAAGACTTCCTCGAAAGGATCTGTGAAAAGTGGTCctgtcaaagaaaataaaataactatactgtcCGATGTGATCATAAAAGCAGGGTCATCAAATGTTTGCGTTTTAAAGGAAGTTTCTAATACGATTGAAAATATGCCGTTTGCTGCTACATCTCATAGTGATTTACCAGAGTGTCTGCAAGCGAGGAAAACTAAACATTTGAAAAAAGTAAAGGAGGAATGTTCTAGAAAAGGGAAGAAAATTAACAGAACAAATAAAGTGACGAATTATTCTAAAGGGAAAAAGTCAGCTCGAGGGCGTACTTTAGTGAAAAAAAGGCAGGAAAAATCTGATAGTGAATCTAGCTCGATGTTCGATGATAGTGAAGTTGTAACAGTTGACACGGATGATTCAGATTACGCTACAGTGGATGACTACATAACTGAATGCATAAGGCAACAAGAAGAAGTAGAAAATTTTGAACCACCCGATTTTTCTTTCGGGATTCATGAAATtgaatattttacagaaaaccataaaaacttggaaaaagatgactgGATCATTGCTCAGTTTGCTACCAAAAAGACTTTAAAGCATTTTGTAGGCAATGTTTTAGCGATCAACGACCAAATTCCTACAGTTAAGTTTGTGCGAAAGGTTAAGGAGTCTAAATGTAAAGAAGGAACCACTTTCACATACCCAATAGTTGATGACGTTTGCACTATTCGACACTTAAAAGATGTTATTACAATACTTCCCCGGCCAAATATTACTCGACGTGGTCAAATCGTTTTTAAAGTTGATTTGAATAATTACAACATTCAATAA
- Protein Sequence
- MLKLACESVKSGQISSRDAQRQFGIPRRTIENKIKNKHTKPVGHPTVLSDAEETQIIRVLQASSDFGSPLTKVDLKLLVHGYLNKNSRGDKFKNKIPGDAWVQGFLARHADELSLRITQNISKARAEKGPEEIAEYFENLSITLKDIPAENIANFDETNLSDDPGSSKCIFRRGVKYPERVANSTKGNISVMFTATASGKRLPLYVVYKSTTLYSEWISGGPPETRYNCTKSGWFDSAIFENYFETIILPWAQKISGTKVVICDNLSSHLSIKVVELCQQNDIKFIFIPPRSTHITQPLDVAFFGPLKKAWRKILYQYKLRNPNQTNLNKKHFPKLLSELINAIQIREAENIKIGFKATGIFPYNPQEVLKNIPEMQEEILSYTIDQALVDYLKETRAPRPMLVKRNKRINCEPGKSVTVLDLNIDSCKGKAIKKSEKRQRKTKDSLFLDEETGLFVAKTDLILNKDVDKDQESYLDLEGSFFISQFQDTYSPESLNKICITIINSYLSQLHSSEKHNEKICEKTFTDFSHFKTSSKGSVKSGPVKENKITILSDVIIKAGSSNVCVLKEVSNTIENMPFAATSHSDLPECLQARKTKHLKKVKEECSRKGKKINRTNKVTNYSKGKKSARGRTLVKKRQEKSDSESSSMFDDSEVVTVDTDDSDYATVDDYITECIRQQEEVENFEPPDFSFGIHEIEYFTENHKNLEKDDWIIAQFATKKTLKHFVGNVLAINDQIPTVKFVRKVKESKCKEGTTFTYPIVDDVCTIRHLKDVITILPRPNITRRGQIVFKVDLNNYNIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00468118;
- 90% Identity
- iTF_01091825;
- 80% Identity
- -