Oiva011126.1
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- -
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000007.1:11214750-11216555[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-07 3.5e-05 24.9 0.1 14 40 26 52 19 56 0.87
Sequence Information
- Coding Sequence
- atGGTTAATAAGTATATAAGAAAAACTACAAATGCATCATGGGACGAGAAAACAATGGAACTTGCAATGGAAGAATCCAAAAAAACCTCTGTCAATGCAGCAGCCAAAAAATATGGTATCAATTTGTCAACACTGCAAAGGCACATAAAGAAGGGATCAGCGACCAAAATCCTTGGAAGATTTGTACCCGTCTTCACCAAAGCTCAAGAGTTAGAGCTAGTCGAATATATTTTGCACATGGATAATCTATTTTTTGGATTgactaaaaaagaatttttggaaCTAGTCTTTCAATAtgcccaaacaaacaaaataaagcatCCGTTTAAAGGCAACGTGGCAGGTGAAGACTGGTACATAGGTTTTAGGGCACGACATTCTGATATAACTCTGCGCAAGCCGGAACCAACCTCGATTGCACGTGCGAGAGGCTTTAACAGACTACAGGTTGCAAGGTTCTTTGATATTCTTGAACAACAAATCAACATCCACAACATCGATGCCACCCGAATCTATAACATGGACGAAACTGGCATCCAAACTACCAGTAATAAACCACCAAGAGTTTTAACTAAGTCAGGGAAAAAACAAGTTGGCGTAATATCTAGCGTCGAAAGAGGGAAACTAACAACCGTGGTGTGCTGCTGTAATGCAGCAGGCTCTTTTATACCACCATTCTTGATCTTTGGTCGAAAAAGAATGGTGGGAAGACTCCTAGACGGAGCTCCACCTGGTACAAGAGCTACTTGTAGCGATAACGGATGGATAAATGGGCCAGTTTTTTTAGAGTGGTTGCGTCATTTTGTGGAAATGACCAGACCATCAGCAGAGAAAAAAGTTTTGTTAGTGATGGACAATCACGTATCGCATAAGTACCTCGAAGCATTGGAATATGCATCGCAGAACAATGTTATATTCATCTCTCTTGCTCCACACACAACACATAGAATGCAGCCACTCGATACGTGCGTTTACGGACCCTTGAAGAACTATTTTGAGCAGGAGGTTTCCCTTTTTCAAAGGACACACGTAGGTCGCATCATCTCTCAGTATGAAGTAGCTAAATTGTTTGGAGAAGCTTATATGAAGGCAGCAAGTGCTCAAAATGCTATAAAAGGATTTTCGTGTACGGGAATATGGCCCACCAATAGGAACATATTCGACGATTCGGATTATATGCCATCAACTGTGACTGATCGGCCAGAGCCAACTCATGGTCAAGCTGTCACTAACATAAGACAAAGTTATGATGTGCCCACATCAAACGCAAACGTCGGGCATCAATCCAGTGACTCAGATCGCACTGTGTCACCGTGTATTCTAGAAAGTATGTATGGGCAAAGCTGCAGAACTCCAGAACCCACTCTAGATGGTgaacaaattataaaaacttcaatttatgtAACCCCTGTTAAAGAACATGATAAGACTGAAAATGCGTTACATTTAACCCCACTTGATATTCGACCTATACCAAAAATAATACCAAACAAAACCAGTCGTAAAAGAAAATCACAAAGAGCTGAAATACTTACAAGCACTCCCATTAAAGAACAACAGAGAcagaaggaagtaaataaacacAAGAAAATAACGAAAACAGGAAAGAggaaaatatcaaaaaaaggaccaaaacaaaataacaacGATTGTAACGAGTACCGATGCTTGGTGTGCAGCGAAATTTATAAAGATCCACCAACAGAAGACTGGATAAAATGCGACGATTGTGGAATGTGGGCTCATGAAGCCTGCACTTCTTACTCAGGCAGAGGTTCTTTCTACTGTGACTTGTGCCAGGAATAA
- Protein Sequence
- MVNKYIRKTTNASWDEKTMELAMEESKKTSVNAAAKKYGINLSTLQRHIKKGSATKILGRFVPVFTKAQELELVEYILHMDNLFFGLTKKEFLELVFQYAQTNKIKHPFKGNVAGEDWYIGFRARHSDITLRKPEPTSIARARGFNRLQVARFFDILEQQINIHNIDATRIYNMDETGIQTTSNKPPRVLTKSGKKQVGVISSVERGKLTTVVCCCNAAGSFIPPFLIFGRKRMVGRLLDGAPPGTRATCSDNGWINGPVFLEWLRHFVEMTRPSAEKKVLLVMDNHVSHKYLEALEYASQNNVIFISLAPHTTHRMQPLDTCVYGPLKNYFEQEVSLFQRTHVGRIISQYEVAKLFGEAYMKAASAQNAIKGFSCTGIWPTNRNIFDDSDYMPSTVTDRPEPTHGQAVTNIRQSYDVPTSNANVGHQSSDSDRTVSPCILESMYGQSCRTPEPTLDGEQIIKTSIYVTPVKEHDKTENALHLTPLDIRPIPKIIPNKTSRKRKSQRAEILTSTPIKEQQRQKEVNKHKKITKTGKRKISKKGPKQNNNDCNEYRCLVCSEIYKDPPTEDWIKCDDCGMWAHEACTSYSGRGSFYCDLCQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01091807; iTF_01091808; iTF_01091809; iTF_01091810; iTF_01091812; iTF_01091813; iTF_01091814; iTF_00850670;
- 90% Identity
- iTF_01091807; iTF_01091808; iTF_01091809; iTF_01091810; iTF_01091812; iTF_01091813; iTF_01091814;
- 80% Identity
- iTF_01091807; iTF_01091808;