Oiva017466.2
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- -
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000011.1:19132009-19132832[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-07 0.00019 22.5 0.0 11 37 1 26 1 33 0.88 2 2 2.1 4.4e+02 2.2 0.0 17 24 120 127 116 128 0.85
Sequence Information
- Coding Sequence
- ATGGTTCAAAATGGAACAACACTGTACAAAGCAGCTAAAAAGTTTAATATACCATGGAGTACATTAAAAGACTACAAAACAAAATATGGGGCAAGCCCGTTCAATGCCACAAAGGCGAAATTCGGAAAACCTTATGTTCTTCCACCAAATCTTGAGATAAAACttgttaattatattaataatatgcaAGAGTTAGGATTTGGCCTCACAGCCACACAAGTTCAACAGATAGCATTCAAAATTgctgaaaattcaaaattgaaacaTCCATTTTCTCAATCGAAGAAAATGGCTGGTTGGTACTGGTGGTCTCAATTTAAAAAGAGATATAATTTGACTCTTAGATCACCTGAGAATTTATCAATAAACCGTGCTGCAAGGGCTGACAGGGAAACTCTCAATGATTTCTATATGAAACTGAATAATTTGATAAAAGAAAATCAACTGCAAAATAAACCAAAACGCTTGTGGAACTGTGATGAAACTGGGTTCATGTTTGTTACAAAATCAGGAAAGGTTGTTTGCCAAGTTGGTAAAAAATATGTGTATAAACAGACTTTCGGTGAAAGGGGAATTACAACGACCGTTTTACCATGTGTTTATGCTGTTGGTACAAAGATTCCACCAATGATAATATTCAAAGCACTTTGTAGAAAATTTACCACTTGCAAGGCCGATGTTGCTGTTGATGGACTCACATGCATCACACCTGACTCGTGA
- Protein Sequence
- MVQNGTTLYKAAKKFNIPWSTLKDYKTKYGASPFNATKAKFGKPYVLPPNLEIKLVNYINNMQELGFGLTATQVQQIAFKIAENSKLKHPFSQSKKMAGWYWWSQFKKRYNLTLRSPENLSINRAARADRETLNDFYMKLNNLIKENQLQNKPKRLWNCDETGFMFVTKSGKVVCQVGKKYVYKQTFGERGITTTVLPCVYAVGTKIPPMIIFKALCRKFTTCKADVAVDGLTCITPDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -