Oiva021739.1
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- -
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000014.1:19472969-19475657[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-08 1.2e-05 26.4 0.0 3 41 9 48 7 49 0.96
Sequence Information
- Coding Sequence
- ATGCCGTACAAAAAGTATAGCACCGAAAATTTAGACCATGCTTTGTTATCAGTTCAGAAAGGCGATATGACGGCTTACAAGGCTTCAAAGCTACATAAAGTGCCTTACCAAACGTTATTAGACAAATTGAAAAATAGACATCCTAATCCTATTGGGCATGTGACGGTTCTCACTAAGGAGGAAGAAGGATTAATTGTCAAATGGATTCATCATATGGCAGCGATTGGGTTTCCCGTCACAAAAGAGCAATTACTGCATTCAGTTTGTAAATTAGTCAAAGAACTGAATAGGCCCAATTCATTTAAAGAGGGAGTTCCAGGAAGACACTGGTATGAAGCATTTTTGAGAAGAAACCCAGATGTGAGGTCAAGGGTGTGTCACGCATTAACTACAGCACGAGTCAGTGCAACAGAAGAAAAAATACGGCACTGGTTTGACAGTGTTTATAAGTACTTGGAAGAGAACAACTATCTAGAAATTCTGCAAGATCCGTCTCGAATTTTCAATTGTGATGAGTCAGCTTTTTTCTTTTGCCCTAAAGGTCAAGCTGTATTGGCAAGGAGAGGtcaaaaaaatatctattgTCGATCCggtaatgatgaaaaagaaaatttaacaCTTTCTATTGGGGCTTCAGCTGATGGAAAACTAATGCCAATACTGGCTCTCTTCCCTTATAAGCGGATCCCGGtgaatattcttaaaaaatatccaaaatcgTGGGTAATTGGCAAGTCTGACAGTGGGTGGATGACATGCCAAACATTTTACATCGCAAATTCGTTCAATGGTTTCTTAATGAAAGAGAATATTAAAAAACCCGTGCTGCTCTTTCTTGATGGACACGTTTCACACCTCTCTCTGTCGTTAACGACGTTTTGTAAAGAAAACGGCATCATTCTCGTGGCACTCTTACCCAATTCAACTCACGTTCTCCAACCCATGGACGTCGCGGTGTTTCATGCTTTGAAGTTGTCATGGAAAAAAAGTGTCCACGACTGGCGGATGGCTAATAACGCAAAAAAGTTGGGAAGAGAAGATTTTGGCCCAATTTTAGAAGAATGCATTCGAAGAACTCTCAAGCCTGACATTTTGATAAATGGATTCCGACATGCTGGTTTATTCCCTTTTGATCAAAATGCCGTTAACTATGATAAACTCCCCAAATCAAGcaagtccagtgatgcaggatCTACAAGTGATTCTGGCTCTGCTGTGAGCACCCCTTTTGATGATGCCATGCCAGCCCATGAACTATCCTCAACACAACTGGAAAAAACTTCTTTAAGTCATCTCAATTCTAAGCAATTTGTTGCTGAATTTGAAACGCTGCTGGGTATAGAAAAGCTTAAGCTATTTAAAGACTGCGATGGAGTTTGGCAAGGAGATATTAAAGatacaaatttattttatttttggaaaaagataaATGGTTGCAATGAGGATGAATTTGAAATCGGTGATACTACTTTGAAAGCAAACGAGTGCACGCTAAACAATATAGAAGacaatattttgaattttgataactataataataatatattagaagGCATTGTTGAGGATGATGGAACTGTAACACTTACGCCCAACTTAACCTTAAGTTCACTAGCTCCTGTAACTGAACATACTGCAAACTGTTATGAAAACTCTTGCAGATCACCATCAAAAGGAAGCGAGCCAGTTGAgagtgatgatgataataatttacgatttcataatttcaACACTGTTTTGAATAATACTTCCACCCCAACTACTAAATCTAAAGAAGCAGCAGAGCGTACTGCATCTGTCAAATCTATTCAGCGTGAAAATTTAAGTCTGACACAGGAAACTTCGTCTATAAAATCTCCGGTCAAATACTTTCCGTCAAATTACACAACTCCTCCAGCGCAAAAGTCCTGTGAAACAAACGAGAATTTACTTTCTGAAGATAATACATCGTGTTTAAATACAGACTCACAAGCAAAGCAAACATTAACAGTAACAGACCCGAACCCTGAACCCATTAATGTAACAGGAATTCTTGATGATTACGCTTCTACTCCAAGCGAATACGTAGTGGTAAGATACGAAGGCGAAAATTTTCCCGGCCTCATAACTAAGGTATCACACGAAGGCACATCGACGGCTTATGAAGTAAAAACAATGACTATGAGTGGCCTAGACACAATTTCTGGTCGTGTGAATTGGCGTTGGCCAGAGAAGGAGGACATCCTTACGTATGACAGTGATGACGTAGTAAAGAAAATAAAGGCCCCCATACCTCTCAATAAAAGAGGCGTTTATTCTGTAGCAGATATGTAG
- Protein Sequence
- MPYKKYSTENLDHALLSVQKGDMTAYKASKLHKVPYQTLLDKLKNRHPNPIGHVTVLTKEEEGLIVKWIHHMAAIGFPVTKEQLLHSVCKLVKELNRPNSFKEGVPGRHWYEAFLRRNPDVRSRVCHALTTARVSATEEKIRHWFDSVYKYLEENNYLEILQDPSRIFNCDESAFFFCPKGQAVLARRGQKNIYCRSGNDEKENLTLSIGASADGKLMPILALFPYKRIPVNILKKYPKSWVIGKSDSGWMTCQTFYIANSFNGFLMKENIKKPVLLFLDGHVSHLSLSLTTFCKENGIILVALLPNSTHVLQPMDVAVFHALKLSWKKSVHDWRMANNAKKLGREDFGPILEECIRRTLKPDILINGFRHAGLFPFDQNAVNYDKLPKSSKSSDAGSTSDSGSAVSTPFDDAMPAHELSSTQLEKTSLSHLNSKQFVAEFETLLGIEKLKLFKDCDGVWQGDIKDTNLFYFWKKINGCNEDEFEIGDTTLKANECTLNNIEDNILNFDNYNNNILEGIVEDDGTVTLTPNLTLSSLAPVTEHTANCYENSCRSPSKGSEPVESDDDNNLRFHNFNTVLNNTSTPTTKSKEAAERTASVKSIQRENLSLTQETSSIKSPVKYFPSNYTTPPAQKSCETNENLLSEDNTSCLNTDSQAKQTLTVTDPNPEPINVTGILDDYASTPSEYVVVRYEGENFPGLITKVSHEGTSTAYEVKTMTMSGLDTISGRVNWRWPEKEDILTYDSDDVVKKIKAPIPLNKRGVYSVADM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01091753;
- 90% Identity
- iTF_01091783; iTF_01091802;
- 80% Identity
- -