Oiva002319.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oeneis ivallda
Gene Symbol
clz9
Assembly
GCA_029955525.1
Location
JARPMR010000002.1:665072-667492[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-08 2.7e-06 28.4 0.2 2 40 15 53 14 58 0.90

Sequence Information

Coding Sequence
ATGGGGCGCTATAAAAGAAAAACTGAAGGTCCTTCATGGTCCAGAGAAGCTTTGAATGAAGCAGTCGAAGCTGTCCGATCGGGTAGAATGTCTGGGTATGCAGCCGCATCAACCTTTGCTATCCCAAGAAAAACTATTATGGACCACGTCACAGGTCGAAGGGGCCAAAAATCATTAAGTCTAGGCAGACCACCAGTATTTAAATATGAGACAGAAAAAATGATGGCAAAATGTTTGCACATAATGGAAAAAAATGGCTTCGGCCTGACTCGTACAGAATTTCTAGATATTGTTAAGGGATATGTCAAACAGAACGATCTAAAAACACCTTTCAACGATGGTACTCCCGGCAAAGATTGGTTTTCAAGCTTCAAAAAGCGTTATaagttatcaattaaaaaaCCGCAGGCTGTAGAGGTTGCTCGTAAGAAAGCCGCAGACCCATTTGTCATCCAAGAATTTTATGATATTTTAGACAGAGTGATTGCCGAATTAGGGCTTCAGGACAAGCCTGAGAGAATTTACAATTTGGATGAAACCAGTTACTGCAGTGATCCACAAAAAACCAAAGTCATAGGTCTTAGGGGATTTCCATCGACTCGGACTACATCATCCTCTGGAAAGTCAAATACGACAGTCTTGATGGCGAGCAACGCTGCTGGGGAGAAAGGAGCTCCATTCATAATTTTTAAAGGGAAGTACGTATGGAGTAACTGGACCTCTAACTTAGCGTACCCTGGAACGTTGTATACAGCCACAGCAAATGGCTGGATAGAATCGCAAGCCTTTTTTGAATATATTGATAAAAGTTTTATTCCGATGATTGGTGATACGACCCAGCCAACACTCCTCATCTATGATGGTCACAGTACTCATGTACAAATAGCTGTAATCGAAAAAGCCTTAAAACACAATATAACGATCTTAAAATTACCTCCCCATACCAGCCATATTCTGCAACCGTTGGACTTGGCGGTTTTTAAGCCTTTCAAAGATGCCTGGGACCAGGAAATGGTCAAGTGGCAAAGAACCCACAATGGCCAAAAACTGCCCAAAGCCGAGTTTTCGAGGATAGTTGGAAAAGTGTGGGAAGCCTTTAACCCCGACATTATAAAAAATGGATTTGCAAAAAGTGGGATTTACCCATTTAACAGGGATGCAGTTCCGGAACATAAATTAGACCCCGATGCTGTAAAGAGGTGGAAAAAGATGGTGGCTAAAAAACAAATACCCCCTCAAAACTCTCCGATGACATTAACTAAATTGTGCCTGAACAAAATCAACTTTTCGTTGAACTTAAACACAATTCCAACCAAAACTTCAACAAGCAACATTAACTCAAAAACCACTGAAATAATATCGTTCGAAGATTTATTTCTGGAAACTATAAAACAAGTTCCGACTACTGGtgtcaaaaaaaaacaagtgaaGATTTCTGGAAGCGCTGAAGTAATAACTCATGAGGATGTTATAACAAGACTGAAAAAAAAGGAAGACGACAAACTTAACAAGGAAAAAGAAATGGAAGAAAAACGAAAGATGAGAGAAAACAAGAAAAAACCAAAATTGAAGGAACAAactaaaaaactaaataaaggaAAGAAAAATGATATGAAGAGCAAACCCAAAGAGCCTACGGAAAGTACAAATACGAATTTAGCCAACCCTAACACAAATGAAATTGCAGTTCCAAGCTCGTCCAGTTTGACTGTCCATCAAAACTCACAAAAACCAACAACCACAAAATCTGTAACCCATCCAAACTCGAAAATAACTGTCTTGCAAGATATATATTTAGAACCAAATGAAAAAGTGTCTcgtgaaaatatattttgtggACAAAAACCTGTTCAACCAAgagaaattactttaaaaactttaaaaaaaaatgaaacaaatagaaaaattaaatgcgaaatcaaacaaacaaaaccAAGAAAGAAGAAACAGAACAAACAAATTGAAGATAACTTGTCTACCGATAGTGAATTTAGTCTTCATGATTCAGATGATTCAGATGTTGAGGACTTCAAAACGTATATTGAAATGTACTTAAAAGATAAAGACTCAGAGGAAGAAATAGAAAATATGTCATTTGGATTTACCGACATCCAGTATTATGAAGAAAAATCCCACAAATTTACAGAACAGGACTGGGTACTGGTTAAATTTTCGGCAAAAAGAAGCCTGAAGCACTATGTGGGGCagattatcaaaataaataacgaCATTCCTACCgtaaaatatttaagaaaaacACAAACTAAACAGggattactgcattttgtataccCCAATGTTGACGATATATGTGAATTGCTGCATGTTGAagatattatttcaattttgccaaagCCTACAGTTTCACGTCGGGGCCAAATTTCATTCAATGTTGATTTTGGTAGCTTCAATATACAGTAA
Protein Sequence
MGRYKRKTEGPSWSREALNEAVEAVRSGRMSGYAAASTFAIPRKTIMDHVTGRRGQKSLSLGRPPVFKYETEKMMAKCLHIMEKNGFGLTRTEFLDIVKGYVKQNDLKTPFNDGTPGKDWFSSFKKRYKLSIKKPQAVEVARKKAADPFVIQEFYDILDRVIAELGLQDKPERIYNLDETSYCSDPQKTKVIGLRGFPSTRTTSSSGKSNTTVLMASNAAGEKGAPFIIFKGKYVWSNWTSNLAYPGTLYTATANGWIESQAFFEYIDKSFIPMIGDTTQPTLLIYDGHSTHVQIAVIEKALKHNITILKLPPHTSHILQPLDLAVFKPFKDAWDQEMVKWQRTHNGQKLPKAEFSRIVGKVWEAFNPDIIKNGFAKSGIYPFNRDAVPEHKLDPDAVKRWKKMVAKKQIPPQNSPMTLTKLCLNKINFSLNLNTIPTKTSTSNINSKTTEIISFEDLFLETIKQVPTTGVKKKQVKISGSAEVITHEDVITRLKKKEDDKLNKEKEMEEKRKMRENKKKPKLKEQTKKLNKGKKNDMKSKPKEPTESTNTNLANPNTNEIAVPSSSSLTVHQNSQKPTTTKSVTHPNSKITVLQDIYLEPNEKVSRENIFCGQKPVQPREITLKTLKKNETNRKIKCEIKQTKPRKKKQNKQIEDNLSTDSEFSLHDSDDSDVEDFKTYIEMYLKDKDSEEEIENMSFGFTDIQYYEEKSHKFTEQDWVLVKFSAKRSLKHYVGQIIKINNDIPTVKYLRKTQTKQGLLHFVYPNVDDICELLHVEDIISILPKPTVSRRGQISFNVDFGSFNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00011935;
90% Identity
iTF_01091749; iTF_00695485;
80% Identity
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