Oiva033348.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oeneis ivallda
Gene Symbol
-
Assembly
GCA_029955525.1
Location
JARPMR010000022.1:13500749-13502908[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.6e-10 1.8e-07 32.2 0.1 1 40 12 51 12 56 0.90

Sequence Information

Coding Sequence
ATGTCACCTCCAAGACCAAAACGGGCTACGTGGTCCGAAGAAAGCTTGAGAGCGGCAGTTAGTGATGTACGTTGTGGCCGACTGTCGACTTACAAAGCTTCGGCGCGATATGGCGTTCCGAGAAGAACCATTAGAAATCATATGAAAAGTGGTGTTTTACACAAGAGTTTAGGGAGAAACGCTATTTTCACTAAAGAGCAAGAAAAGGATTTCGTCAGCCGCATAATAAAATTTTCTGAAATAGGAATACCTCTGACGCCAAAAATGATTCGGGTTCAAGCATTTGCTTTTTGTGACAAATATGACATTgtcaataatttcaacaaggAAACAGGACTTGCAGGAAAAGGGTGGTTGAGATTGTTTTTACATCGAAATCCAGAGTTAGCAAAACGAAAAGCACAATTCTTAAACCCAGCTCGAGCccagaaattaaataaaactattgtCGCTCATCATTCCGATGAAGTTCGTAAACTTTATGATGAATTAGATCTTCATTACCATCctgaaaaaatttacaatatggACGAGAAGGGTTGTCGGCTTACATTACATCACCAACAAACAGTGATTGCTCAGAAGGGTTCTAAAAGGGTGCATATGCAAGGCTCTGAGCACGGTGAGAACGTCACTGTAGTTGGATGTGCTAATGCTATAGGGAATCCGATACCACCCATGATTCTTTTTAAGGGAAAAAGGAAGAAACCGGAGTATGACGAAAATTTGCCTGCAGGATCTATTGTGCTCATGGCACCAAAAGGGAGTATGACAACTGAGTTGTTTACCGTTTTCATTGAACACTTAGCAAAGTATAAAACCCCTGGAAAATGCCTCCTCATCTTTGACGGTGCCAAATGTCATCTAGATTTTCGCATTGCCGAAACAGCTGAAAAACATAACATTATCCTTTACTGTTTACCATCTAACACGACACATGAATTGCAGCCTCTTGACAAGGCTTGTTACAAACCTTTTGAATCTTACTGGGATCAAGAAGTTctgcaatatattatgtatgaaacACGTGCTAAACAGGTCACTAAAACACGATTTAACGTAATTTTATCTAAGGTCTGGTCAAAGAGCATGACCTATGCAAATATAACAAGTGGATTCAAAGCTACTGGACTTTATCCATTTAATTCTGATGCAATACCTGAAACTGCATTCGCTCCTTCCATCTTGACAGAACGTCGTATCAGTGAAAGTAATTCGCATGACTGTGGTGAATCTTCACAATTAATAAATGCAAATGCAAGAAGACCTCACGCAAATTTGGCAGAATCCGATACAAACATTGAAACAGACACTGATTCACGTCAGTCCTCACCCATCGCGAACATTCAGCATTTGCAAAATCTGATTGATGCCGAAAAAGTCTTGCCATTATCTCCCGGCACACCTGATCTTCGAGTATTTTCATTTGCTTCCCCTGTAGAGCACAGTACACCACCTCGAACAGATATTATTGACCAAAATTATCTCGACAATCTTCCCGGGCCCAGTGGCTTACAGACTACCAAACGACTTGTAGAATATAGTGATAGTACAGAAGAAGAGCAGTACAGTACAGCGTCTGAAGAAGACAATCTGTATTCATTTATAAACAGGTGTATTCCACCGAAACGCTTAAGAATTTATTCTTCTTCAGACACCGAGTGTGACAACGAAAATTTAAATCCTAATAACGTTACTTTACCTAAGTCCGATGGCGAAGATACTGAAGATGACGAACCTTTGGCCAAAATTGCTGGAAGTAAGAAGACTGATTTCCAAAAATTTATGCCTACACCTGATTATAGTGTTGTTAAGAACCGTCCACGTAGAAAAGCTTTAAATTATAAAGGTCAGAGAGTTACCAAAGATTTATTTAATACAGATAAAGAACCAAAAAAGAAGGATTCAAATAACACAAAGAAAGGAAAGAAATCTATAAAGAAAACTACAAAAGAAACCTATAAACAAAAAAGGAAACGTTCTATTAAACCAAAATCAGCTGAAGATAGAGAACAGTGGTACTGCCTTGCATGTAAAGAGGAGAGAATTGCAGATATGAGACAATGCGTGGAGTGTCATCAGTGGTACCATGAGGATTGCGTTGGATTGACAAAAAGTGATCTAGACGCATTTGTATGTCCTAATTGTCAGGAAATTTGA
Protein Sequence
MSPPRPKRATWSEESLRAAVSDVRCGRLSTYKASARYGVPRRTIRNHMKSGVLHKSLGRNAIFTKEQEKDFVSRIIKFSEIGIPLTPKMIRVQAFAFCDKYDIVNNFNKETGLAGKGWLRLFLHRNPELAKRKAQFLNPARAQKLNKTIVAHHSDEVRKLYDELDLHYHPEKIYNMDEKGCRLTLHHQQTVIAQKGSKRVHMQGSEHGENVTVVGCANAIGNPIPPMILFKGKRKKPEYDENLPAGSIVLMAPKGSMTTELFTVFIEHLAKYKTPGKCLLIFDGAKCHLDFRIAETAEKHNIILYCLPSNTTHELQPLDKACYKPFESYWDQEVLQYIMYETRAKQVTKTRFNVILSKVWSKSMTYANITSGFKATGLYPFNSDAIPETAFAPSILTERRISESNSHDCGESSQLINANARRPHANLAESDTNIETDTDSRQSSPIANIQHLQNLIDAEKVLPLSPGTPDLRVFSFASPVEHSTPPRTDIIDQNYLDNLPGPSGLQTTKRLVEYSDSTEEEQYSTASEEDNLYSFINRCIPPKRLRIYSSSDTECDNENLNPNNVTLPKSDGEDTEDDEPLAKIAGSKKTDFQKFMPTPDYSVVKNRPRRKALNYKGQRVTKDLFNTDKEPKKKDSNNTKKGKKSIKKTTKETYKQKRKRSIKPKSAEDREQWYCLACKEERIADMRQCVECHQWYHEDCVGLTKSDLDAFVCPNCQEI