Oiva028282.1
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- -
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000019.1:12833975-12836327[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-10 7.6e-08 33.4 0.1 1 41 14 53 14 56 0.93
Sequence Information
- Coding Sequence
- ATGGGGAGAAAGAAAACAGAACGGAAAATTGGCAATCATACAGAGAATCAAATGAAAAATGCGCTGGATGCAATAAAATCTGGGAAAAGTATTAGGCAAGCAGCACGAGAATTCAAAATTGCATTCACCACTTTACAAAGGTACTATAGAAGTGGGAATACTGACCGGCTGACACCAAATTATAATGTCAGAAAAATATTTACAAGGGATCAAGAGACAgcgttacgtaattattttgaaaattgtgCATTGATGTTTTATGGCCTAACCACTAGAGATTGCAGAAAAATAGCTTTTGAGATGGCGAAGCGCAATAATGTCAATATTCCTCAAAGTTGGGAAGAAAATCAAATGGCCGGAATTGACTGGTTAAGAGGCTTTCGGGAACGATTTCCGGACATGTCTTTGCGCAAACCCGAAAATTGCAGTTTGGCGCGCGCAACAGCGTTTAACAAGGAAAcagtaaaaaagttttttgacAACCTTGAAAATGTGCTTGGCCGCAGCCCAGCCTTCGCAGATGGCACgcgcatttataatttagatGAAACAGCTACGAGCACTGTCCAGAAAAATCCAAGAGTTTTAGCtccaaaaggaaaaagaaatatATGTAAAGTGTCCAGCGGAGAAAAAGGTACGCTCGTTACAACGTGCAATATCATAAGTGCAGGAGGATATGCACTTCCTCCAGCATTAGTGTTCCCTCGCAAAAAGATAAATCCTCGCATGCAAGTTGGAACACCACCTGGTTCCCTCATCCTGGCGTCCTCCACGGGGTGGATGAATGGTGAGACTTTCATAGAGGTAATGAAGCATTTTATCCAACGATCAGCATCTTCAAAGGATTTTCCAACAGTCCTTATAATGGATAACCATGAATCGCACTTATCAATAGAAGCACTCGATTTAGCTAAACAGTCGGGGGTGACTGTGCTGACATTACACCCGCACACATCAGCGAAACTGCAGCCGCTGGACGTTGGCATCCATGCACCTTTTAAAACATATTATGCGTCTGCAATGGAGTCGTGGATGATGCGAAATCCCGGATGTCCTGTTACCATTTATGACGTTGGAGCGCTGATAGGACAGGCCTTTAAAAAGTCTATGACGCCTGTAAACATTAAGAATTCATTCAAAAAAACTGGCATATATCCCTTCGACAGGAATATATTCTCAGAAGAAGATTTCATGCCCAGCAGTGTCACGGACAGACCTGCAGTTGAGGAACCAGCAGGTGATGTCTACGAAACTGATGAAGTTTTAACAGTGCCGATTGTTGACATGGAACATATTTCTCATGAAATTTCACACCAAGATGAAGATACTCCAAGCCCTTCAGTTTTAGACACTATTCAAGATTTGGTTGTTAGTCCACCCAGTTTTCCAATTAAAACAGCTGTGTCTGCTGCATTATATGACATTTCACAAGTTCTGGTTACTTCAAGTCCACTTTCCCTGTCTCATATGTGTATGTCAGTAATGAATGCGTCTGCCAATTCGATCCCTGAAACTGCACCACAAGTAAGTCATCTCTCTCAAAATAATTCTCCCATTCAGTCGTCAGTAGCTGGACAAAAATGCGTTGATTCCCCTGCCGGCAATGCTAGCTCATCACATGCCAAAACTCATTTATCTTCCCGGCTTATTACACCAGAACAATTCCGAAAACCTTTAAAAGCGGCCACTCGAAACAATAAAAGAAAGCCGAGACGATTGGGGAGAAGCCTTATTGCCACCGATACGCCAGAAAAGGAAGAAATTATGAAAACAAAAAAGGCAattaaaagaaagaaagattCGAAATCCACAGGAAAAAAGGCTATTCGAAAAGTTCTTCAGAGTGATTCTGAAGAAGATTGTGACATTTTCTTAGATGATGACTCATTAGATGAATGGAGCTGGTGTGGCAATGAAGAAAATGAAGAACATTTTATTACACAAAAGTCACTGATGAAGCCTTTAACAAGACTACCAAAAGAGGGTGAATATGTTTTAGTAGAATTTGCGTCGAAAAACCAAAAGGTTTATTATGTTGCTAAGATACTAGAAGAAAGAAATGATAAACTTGACCTCTATGTGAGTTATTTGAGACATAAGAAAGGACATTTCACAATGCCAAACACACCAGATTTGGCCTATGTCAAAGATGATAATATTAAGCTTTTGTTGCCAACTCCTACCTCAAATGGCAGCACTGCTCGCCAACAGTCTTATCTTACATTTGGTGTTGATTTGACTGCCCTTAATATTCGTTAA
- Protein Sequence
- MGRKKTERKIGNHTENQMKNALDAIKSGKSIRQAAREFKIAFTTLQRYYRSGNTDRLTPNYNVRKIFTRDQETALRNYFENCALMFYGLTTRDCRKIAFEMAKRNNVNIPQSWEENQMAGIDWLRGFRERFPDMSLRKPENCSLARATAFNKETVKKFFDNLENVLGRSPAFADGTRIYNLDETATSTVQKNPRVLAPKGKRNICKVSSGEKGTLVTTCNIISAGGYALPPALVFPRKKINPRMQVGTPPGSLILASSTGWMNGETFIEVMKHFIQRSASSKDFPTVLIMDNHESHLSIEALDLAKQSGVTVLTLHPHTSAKLQPLDVGIHAPFKTYYASAMESWMMRNPGCPVTIYDVGALIGQAFKKSMTPVNIKNSFKKTGIYPFDRNIFSEEDFMPSSVTDRPAVEEPAGDVYETDEVLTVPIVDMEHISHEISHQDEDTPSPSVLDTIQDLVVSPPSFPIKTAVSAALYDISQVLVTSSPLSLSHMCMSVMNASANSIPETAPQVSHLSQNNSPIQSSVAGQKCVDSPAGNASSSHAKTHLSSRLITPEQFRKPLKAATRNNKRKPRRLGRSLIATDTPEKEEIMKTKKAIKRKKDSKSTGKKAIRKVLQSDSEEDCDIFLDDDSLDEWSWCGNEENEEHFITQKSLMKPLTRLPKEGEYVLVEFASKNQKVYYVAKILEERNDKLDLYVSYLRHKKGHFTMPNTPDLAYVKDDNIKLLLPTPTSNGSTARQQSYLTFGVDLTALNIR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00039721; iTF_00043418; iTF_01424986; iTF_01424987; iTF_01091680;
- 90% Identity
- iTF_01091680;
- 80% Identity
- -