Oiva025704.1
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- -
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000017.1:16398951-16399352[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-11 9.5e-09 36.3 0.0 7 37 20 51 15 57 0.91
Sequence Information
- Coding Sequence
- ATGGTTCGTGACTACAAACGCAAGACTGACAGAGGGTCGTGGTCCGAAGAATCCATGCGGGCAGTTCAAGCGGTTTTGGATGGAAAAATGGGTTATTATAAAGCAGCTAAACAATTTGATGTGCCACAGACGACATTAGAGAGAAAAGTTAAGGCTGCTCGCCTAGTATTGAACAAAACATCTGATGAAAACTTATCCATACCAATTAAAGTACCATTGGCTCCTAGGCTGCCTGTTTTTTCTGTGTCTGAAGAAAATGAGCTTTGTGCCTATTTATTAGAAATGGAAGAAAGGTTATATGGACTTACGGTTAAAGATCTAAAGGCATTAGTATACCAGTtagcaattaaaaataataagccTAATCCATTCAACGCTGAGAAAAAAGAAGCTGGCAGATAG
- Protein Sequence
- MVRDYKRKTDRGSWSEESMRAVQAVLDGKMGYYKAAKQFDVPQTTLERKVKAARLVLNKTSDENLSIPIKVPLAPRLPVFSVSEENELCAYLLEMEERLYGLTVKDLKALVYQLAIKNNKPNPFNAEKKEAGR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01246762; iTF_01431761; iTF_00282194; iTF_00420474; iTF_00147222; iTF_00147221; iTF_00147232; iTF_00942734;
- 90% Identity
- iTF_01431761; iTF_00282194; iTF_00420474;
- 80% Identity
- -