Oiva035213.1
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- -
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000023.1:16426503-16426949[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-12 7e-10 39.9 0.0 1 37 22 59 22 65 0.90
Sequence Information
- Coding Sequence
- ATGCCGCGAAAGTCCGTTCAAATTGTACCTGGAGTCAGAAAATATGGAACTAAAAGCAATTATACTCCAGAAAAATTGGAAGAAGCTCTCAATAAAATTCGATCAGGAGCCATGTCAAGAGTGAAGGCTTCGAAGCATTATAATATACCGCAAGTTACTTTATATTACAAATTAAATGCAAAACATAATAAGACCGTCGGAAGGCCTGTTACATTTACaccagaagaagaagagagtTTTCAGAACCATTTGTTATTATTAAGTGATGTGGACCTGCCATTAAGCATGCTAGATTTCCGTGTTATTGTCAGAGattatcttaataataataacagaaCTGTccctaaatttaaaaataatatgccAGGCTATGAATGGGGGACATTATTTGTTGAAAGACACCCTCTGCTCAAGGAATCAAGGAAAAACTGTCTCACAATATATTaa
- Protein Sequence
- MPRKSVQIVPGVRKYGTKSNYTPEKLEEALNKIRSGAMSRVKASKHYNIPQVTLYYKLNAKHNKTVGRPVTFTPEEEESFQNHLLLLSDVDLPLSMLDFRVIVRDYLNNNNRTVPKFKNNMPGYEWGTLFVERHPLLKESRKNCLTIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01153834; iTF_01153794; iTF_01158741; iTF_01155031;
- 90% Identity
- -
- 80% Identity
- -