Oiva025686.1
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- retn
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000017.1:16139843-16150743[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-17 2.8e-13 51.5 0.1 29 89 4 62 1 62 0.93 2 2 3 1.7e+04 -2.3 0.0 25 38 189 202 153 204 0.53
Sequence Information
- Coding Sequence
- ATGGCGAAGTCGGTCCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCGCGCGGCGGCCTCGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTGCGACTGCCTTCCTCCATCACCTCAGCCGCCTTCACTTTACGCACACAATACATGAAGTACCTATACGACTATGAGTGCGAGAAGAAGAACCTGTCGACGCGGAGTGAGCTGGACGCTGCCATTGAGGGCAACAAGCGTGAGGGCCGCCGCGCCTCTGGGCAATACGACGCGCAGGCTGCTTTAGCCATGCCACCTTTAAACAGAATGCCAGCATCCCTCGCGCAGTTGTCGCAACATATGCAACCCCTATCACTATCGCTCGGTGGGGGGGTGGCAGGCATTCCACGACTGCCACCACTGCCGCCGCACGCACCGCATATATCACAGCACGATATAGAGTACCGCGTGCGAGAGTATATGAAGATGATTCAGCAGCAACGCGAGTTGATCCGAAATGGTTCGGAATCACCCCCGAGTGCTCCAATGGTATCTCCTCGGGACGCAGCGCTGTCAGCCATTGACGTATCACGCCTCACTCTCTGGTCTTTATACAACAACAATAACAACAGTCCTCAGCCAGATCTCGAGCCGCAGCGTGAGGCCTTAAATCTAAGCGAAAGTCCAAACTCAAGCTTAAGCGGTGGTAAAAGGGAAGCGTGCCGCTCCCCTCCCCCACCCGCGAAGCGCCGCACGCCGCGTCCCCCCTCCCCCACGCCCGCGCCCTCCCCGCAGCTGGCCCGCGAACCCTCCCCGCGCACTTCTCCGCGCACGCACGCGCATCTCAACGGTAACACGAACGGAGTGAATGGAGCTGCCTTCAAGATCACCACAAGAGGTGACGCCAACACAGGCGACCAGCAGCTCGTGGTATCAATTGAACTGAACGGCGTCACGTACGAAGGCGTTCTGTTCCCATCACAAAATGGCAATGGCCAAAATGGTCATCGGCAAATGGTCTCTTAA
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRMPASLAQLSQHMQPLSLSLGGGVAGIPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELIRNGSESPPSAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSLSGGKREACRSPPPPAKRRTPRPPSPTPAPSPQLAREPSPRTSPRTHAHLNGNTNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00959952;
- 90% Identity
- iTF_00642129;
- 80% Identity
- -