Basic Information

Insect: Oegoconia quadripuncta
Gene Symbol: -
Assembly: GCA_949316235.1
Location: OX438754.1:2516347-2534186[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.035 3.3 9.3 1.9 2 23 36 57 35 57 0.96

2 14 0.0032 0.3 12.5 1.7 1 23 95 118 95 118 0.96

3 14 0.0064 0.6 11.6 2.6 1 23 120 144 120 144 0.97

4 14 4.2 3.9e+02 2.7 2.2 1 23 153 175 153 175 0.88

5 14 0.3 28 6.3 0.1 1 23 180 201 180 201 0.89

6 14 0.24 22 6.6 4.7 1 16 261 276 261 283 0.79

7 14 0.0014 0.13 13.6 0.8 1 23 289 312 289 312 0.96

8 14 0.049 4.6 8.8 2.7 1 23 321 344 321 344 0.97

9 14 0.053 5 8.7 0.2 3 23 351 373 349 373 0.93

10 14 1 97 4.6 1.0 3 23 380 400 380 400 0.96

11 14 0.0014 0.13 13.7 0.5 1 23 405 427 405 427 0.97

12 14 0.0035 0.32 12.4 1.1 1 23 433 455 433 455 0.97

13 14 7.2e-06 0.00067 20.9 3.7 1 23 461 483 461 483 0.98

14 14 6.9e-05 0.0064 17.8 5.3 1 23 489 512 489 512 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.035	3.3	9.3	1.9	2	23	36	57	35	57	0.96
2	14	0.0032	0.3	12.5	1.7	1	23	95	118	95	118	0.96
3	14	0.0064	0.6	11.6	2.6	1	23	120	144	120	144	0.97
4	14	4.2	3.9e+02	2.7	2.2	1	23	153	175	153	175	0.88
5	14	0.3	28	6.3	0.1	1	23	180	201	180	201	0.89
6	14	0.24	22	6.6	4.7	1	16	261	276	261	283	0.79
7	14	0.0014	0.13	13.6	0.8	1	23	289	312	289	312	0.96
8	14	0.049	4.6	8.8	2.7	1	23	321	344	321	344	0.97
9	14	0.053	5	8.7	0.2	3	23	351	373	349	373	0.93
10	14	1	97	4.6	1.0	3	23	380	400	380	400	0.96
11	14	0.0014	0.13	13.7	0.5	1	23	405	427	405	427	0.97
12	14	0.0035	0.32	12.4	1.1	1	23	433	455	433	455	0.97
13	14	7.2e-06	0.00067	20.9	3.7	1	23	461	483	461	483	0.98
14	14	6.9e-05	0.0064	17.8	5.3	1	23	489	512	489	512	0.98

Sequence Information

Coding Sequence: ATGGCttcaccaacacatttggactgCGGAGAGAGTCCTTCTGAGGACTCCGCTGGTTTCAACCAGAGCCCTAAGCTCACCACTATCGACTTAGTTGGAGGCATACGCTGTCACATTTGTCTCTTGACATTTGCCAATAAGAAGCAATACGATGgacactacactacacacaaTACTGGGAGTGCAGATATTGTGTATGCATGTGTCATTTGTAACAAAGAAATAGTTGGCTACCCTAGTTTCCGTGGACACTGCTACGCCACTCatgtcataaaaaataaatacaaGTGTAAGTACTGCTCCAAATTCATGTCCAAGAATACAGCACTAcaggaacacatcaatgctaaaCACAACTTCAAGTGCAGTAACAGTTCTTGCAAAAAACAATTCCCATCACAGAAAGAGCTCCATTTGCACCAAATCATACATATAAACAAAGGGAACAAACCTCCGTACCAGTGCCAAACCTGCAAGAAACAGATTGATAACTTTGACTCATGCGAAAATCACATAGACGAACACTGCCAACTCACCTACTCATGTCCCATTTGTAATGAAGCTATATCTAGGACTAATGCCACCGAGCATCTGACTAAGCATTTTGGTGACATACTAAACGATGACAACAGAAAAGATGCTGACACTACTGAAATATCTGAAGATAGTTCAATAAACATTGCTGGCGGTATATTATGTTGTGTCTGTAATGACATGTACAAGAACCGATCAGATTTTGATTCACATTTTGTCGCCGATCACGATGCTGAAAACATAATATACTCCTGCAACATCTGTAAGAAGACATTCCAAAAGTATTCTCTATTCGGCGACCATTGCTACAATCACTTCTCAAAGGATAGGTTCGAATGCGACGAATGCGCCAAATCTTTCTGCCGACTGCCGTTACTGGTGCTTCACACCGAGATGTTCCACGACGCCCGCGCCGCCGCTAAGCCGTTCACCTGCGAGCGGTGTGCGCACTCGTTCATGTCGTCCAATCGTTACCGGGAACATATGCGGCTGGTGCACGATGTACAGCAGGTCTGCTGTCCCAAGCCCGGCTGTACAAGAGCATTCGAAGCACCAAAAGACCTGATCATGCACCTGAAAGATCACCAAACTCTTGACAATTGGTGCCGCCAGTGTGGTCTTCAGTTCATCACCCTCGCCTCATGCGAAAAACACCTTGATGTACACAAGAAAAAACTGTACTCATGCCCAGTCTGCAGTCGACAGTACGGTGAGAAATACCTCCTCATGAAGCACATAACGCAGCATTTTGAAAGCGTGTTCCACATGTGCAAAGTATGTGGTAAGATATACAATGCGAAGAACCGTCTTGTGGAACATGTGAAGACACATTCAACGGTTAAAAGTTACGAATGTAAATATTGCGGCAAAGGATTCGCAAAGTCAAACCATCTGGAGCAACACCTGCATATGCACACAGGGACCATGCCGTACAAATGTACCGAGTGCTCCAAGAAGTTCGGCACATATCCAAACTTCCATAAGCATATGCGCAAAATGCACAACATAGattcaaaaacaatgaaaaagTCCGTTGTAGATAAGTTGAATGGTGATATGGATTTGGAGGAAAACTTTGAAAAATCTATAGAGCCAAACATACAAACGGACATATCTATCAGTACAAATGTGTTAACATATGAGTTCAAAAATGATGAGAGTACCATGGACTCTGACAGCATCGATCCCATCATTATAGAAAAAGAGTCGCAAATATTCGAAGCCGATTTGAATTCCCTGAATACGAACAGTGGTATCATTGAGCTGACCAATGTAATACCAGTAAACAACTACGAACCCgAAGCATCGCCAGACTCGTCAAACGCCCTTCCGACAGCGCCGCGTGAGTACGGTCCAGACTTTGTGAACACCGGCGTTGGCCTCTCCCACTACACCGACAAACTTATCGACCTCGATGACCACTTCCTGCCTCATATCGACCCTCTCCTCACGCTCAAAACCCACGACCTGTACGTAAACAACATACAATACCAATACGATAATCAGTTTCAATACGAGCCGATGGGCAGCAACTCGGGATGGGAACCACCGATGCTGACCAAGGTTTATGGTAACTGGGAGTTAGATGATATAGCCGCTACTAGGTTGTCAGTTatgaatacagatatatttTAA
Protein Sequence: MASPTHLDCGESPSEDSAGFNQSPKLTTIDLVGGIRCHICLLTFANKKQYDGHYTTHNTGSADIVYACVICNKEIVGYPSFRGHCYATHVIKNKYKCKYCSKFMSKNTALQEHINAKHNFKCSNSSCKKQFPSQKELHLHQIIHINKGNKPPYQCQTCKKQIDNFDSCENHIDEHCQLTYSCPICNEAISRTNATEHLTKHFGDILNDDNRKDADTTEISEDSSINIAGGILCCVCNDMYKNRSDFDSHFVADHDAENIIYSCNICKKTFQKYSLFGDHCYNHFSKDRFECDECAKSFCRLPLLVLHTEMFHDARAAAKPFTCERCAHSFMSSNRYREHMRLVHDVQQVCCPKPGCTRAFEAPKDLIMHLKDHQTLDNWCRQCGLQFITLASCEKHLDVHKKKLYSCPVCSRQYGEKYLLMKHITQHFESVFHMCKVCGKIYNAKNRLVEHVKTHSTVKSYECKYCGKGFAKSNHLEQHLHMHTGTMPYKCTECSKKFGTYPNFHKHMRKMHNIDSKTMKKSVVDKLNGDMDLEENFEKSIEPNIQTDISISTNVLTYEFKNDESTMDSDSIDPIIIEKESQIFEADLNSLNTNSGIIELTNVIPVNNYEPEASPDSSNALPTAPREYGPDFVNTGVGLSHYTDKLIDLDDHFLPHIDPLLTLKTHDLYVNNIQYQYDNQFQYEPMGSNSGWEPPMLTKVYGNWELDDIAATRLSVMNTDIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -