Basic Information

Insect: Oegoconia quadripuncta
Gene Symbol: -
Assembly: GCA_949316235.1
Location: OX438743.1:42449141-42458951[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0008 0.075 14.4 0.7 1 23 302 324 302 324 0.97

2 12 0.13 12 7.5 3.4 1 19 344 362 344 366 0.92

3 12 4.2e-05 0.0039 18.5 2.8 2 23 372 393 371 393 0.96

4 12 0.00019 0.018 16.4 1.4 1 23 397 420 397 420 0.96

5 12 0.0044 0.41 12.1 0.4 1 23 423 445 423 445 0.97

6 12 0.00013 0.012 16.9 0.3 2 23 523 544 522 544 0.95

7 12 0.55 52 5.5 0.4 3 23 565 586 564 586 0.95

8 12 1.8e-06 0.00017 22.8 4.2 1 23 592 614 592 614 0.98

9 12 0.0015 0.14 13.6 2.3 1 23 619 641 619 641 0.97

10 12 0.074 6.9 8.2 4.6 2 21 648 667 647 670 0.94

11 12 2.3 2.1e+02 3.5 2.2 1 19 678 696 678 697 0.88

12 12 0.042 3.9 9.0 0.6 3 19 710 726 709 728 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0008	0.075	14.4	0.7	1	23	302	324	302	324	0.97
2	12	0.13	12	7.5	3.4	1	19	344	362	344	366	0.92
3	12	4.2e-05	0.0039	18.5	2.8	2	23	372	393	371	393	0.96
4	12	0.00019	0.018	16.4	1.4	1	23	397	420	397	420	0.96
5	12	0.0044	0.41	12.1	0.4	1	23	423	445	423	445	0.97
6	12	0.00013	0.012	16.9	0.3	2	23	523	544	522	544	0.95
7	12	0.55	52	5.5	0.4	3	23	565	586	564	586	0.95
8	12	1.8e-06	0.00017	22.8	4.2	1	23	592	614	592	614	0.98
9	12	0.0015	0.14	13.6	2.3	1	23	619	641	619	641	0.97
10	12	0.074	6.9	8.2	4.6	2	21	648	667	647	670	0.94
11	12	2.3	2.1e+02	3.5	2.2	1	19	678	696	678	697	0.88
12	12	0.042	3.9	9.0	0.6	3	19	710	726	709	728	0.97

Sequence Information

Coding Sequence: ATGGATCAGGGCAGTATCCCCGGGGATTCGGAAGTATTATATCCGATCCTGTTTATCCCAAAGAAGTGTACAAGGCTCGAATCCAACTGCGAAGTCACAGATAACGTGTATATCGACCTGAAAATAACTTCCCCGGACGTGGAGGGGAACCAGACGGATATTTACTCCGGTTTCTGTAATGTGAAGCTTATAGACAGCTATGATGTCAGCATCCAGCAGGAGAAATCGAGTAATAAAGCGTCTGAAGCATTCAATGAGAATGATATACCAGTGATCATAGCGGATGCGAATACTGCGCCATACAACCAGTCTGAGGTATGGATCGACCCGTCCAGAAGCCCATATGTGTATAATCATTATGACCCACCGACCCAGGATGTGCCCCACTACTCTGTACGGCAGGAAACGAGAACAAGTTGCATAACATTTGAGCACCACAACACTTAtatcactaaaaatgttttcaactaTAAAGAGGCTGTACATTATTCATCACCTGATGATTTGGACACCAAAAAGAATAAGAAAGTGATCAAAGATGTTAATGTCCTGCAGAATTctgatacaaatatttatgaggATGATGAATTTGAATGTGGTGTGTTTTTATCTCAGCTGCCGGAGGAGATTATGAATGAGAAAGAGAGTAGAGATAGAGAGGAATTGAAATTTATAGGGCTGAATAGTGAGAATGATGCGTTAAAACAGTTGATGTCTTCAGATATCCAGTCAGTGTCTAAGCAGCGGAAGACGATTCTGTTCCTAGGGCAGGATTCCCAGCACGGGCAGACGATTCAGAAGGTTGCATATACTGACCCATTCATGAAATGTCCTGTTGATGGTGGGGAAGTGGATAATGAAGTTGTTATAGAAAACACCAACCCAAGCCCGAACCACAAGAAATACCAATGCGCAAAATGCCAGCAAATTTTCGATCAGATATCTGCCCTCCGTGACCACATGGTCCACCACAATACGAAATGCTCCAGGCAGATGAAACACAGACCTGATGAGGACGATGATGTCAAGTACATGTGTTTAGAATGCGGGAAACATCTGAAGAGTCAGGAGAAGTTCGAGCAGCACTGCTTGGGTCATGGTGACCCGGAATTGGAGTGCAGCAAATGTCATAAGGTGTTCGCGTCGAAGTTCACACTGCGGGCACACAAGAAGATACATACCAGGAAATATTCGTGCAGATACTGCCCTCGTACATACACTCACCTAGAGGCGTTGCAAGCGCACGTGACCCGATCCCACTTCGTCTTCAACTGCGACGCCTGCGACTTCACCACGAGCAACTACGTCGATCTTACGGACCACCAGAAGATCCATGCCGATATGACTACCTGGTCCAAGGACTCTAGCGAGACTGAACTAGCCGAGTCCCTCATAGACGACAGTGAGGTGTTCACTCCAGAAGGGGAGGACTGGAAACTGGAAGAGGACTCCAGGGAGCTCGATACCAACTACGAAATCCAGAGGGCGGACTCCGTAATCGCCAAAGTCATCTCCAACAAAATGTTCCTCTCGAATAAGGCTAAGAGGAACAGGAAGTATAACAAGGTATGCGAAGTATGCCTGAAGTCGTTCGACCGCGTCAGCGACCTAAAGCGCCACCTCATCGAGCACGTGGTCCGCAGCACCCTCGCCAAGACCCCGGTCAACGACAACGGCACCCTCACCATCCTCTGCGAGGTCTGCCAATCGGAGACATTCACcaaaatagataaatacaaaGCTCATTTACGTGACCACGCGAAGCTAACACTCTACCAATGCACTTTCTGCAACAAATCATTCAGTGACTCGTCAAACTTCTCCAAGCACAAGAAAATCCACGGCGCCACGTATTTCCAATGTGATTTATGCCAAAGGAAGTTCAATTCTAAGAAAATGATATCCCAACATATGGAATATCATAATAAACATCCGCCATTACAATGTTACTACTGTGAAAAGTATTTCCACTTTGAATCTATGCTGAATAAGCATATCAAATGCGCTCATACCAAAGAGATGTCGAGTAGATTCCGATGTAGGTTCTGCCATGAGTATTTTAGGACTTTGAAAGATAAATGGGAGCATGAGTGGAGGGTCCATAAGGTTAGGAAGATGATAGTGGACTGTCTGGTCTGTGGAGCCAAGTTTAGGAAGTACGCAGAGCTGAAGAGGCACTGTGTTGAGCTCCACGATATAGAAATACCACCGGCGAAAAAATTGTTGAAGAGGAAATCGTCGTGGGCATTCgactga
Protein Sequence: MDQGSIPGDSEVLYPILFIPKKCTRLESNCEVTDNVYIDLKITSPDVEGNQTDIYSGFCNVKLIDSYDVSIQQEKSSNKASEAFNENDIPVIIADANTAPYNQSEVWIDPSRSPYVYNHYDPPTQDVPHYSVRQETRTSCITFEHHNTYITKNVFNYKEAVHYSSPDDLDTKKNKKVIKDVNVLQNSDTNIYEDDEFECGVFLSQLPEEIMNEKESRDREELKFIGLNSENDALKQLMSSDIQSVSKQRKTILFLGQDSQHGQTIQKVAYTDPFMKCPVDGGEVDNEVVIENTNPSPNHKKYQCAKCQQIFDQISALRDHMVHHNTKCSRQMKHRPDEDDDVKYMCLECGKHLKSQEKFEQHCLGHGDPELECSKCHKVFASKFTLRAHKKIHTRKYSCRYCPRTYTHLEALQAHVTRSHFVFNCDACDFTTSNYVDLTDHQKIHADMTTWSKDSSETELAESLIDDSEVFTPEGEDWKLEEDSRELDTNYEIQRADSVIAKVISNKMFLSNKAKRNRKYNKVCEVCLKSFDRVSDLKRHLIEHVVRSTLAKTPVNDNGTLTILCEVCQSETFTKIDKYKAHLRDHAKLTLYQCTFCNKSFSDSSNFSKHKKIHGATYFQCDLCQRKFNSKKMISQHMEYHNKHPPLQCYYCEKYFHFESMLNKHIKCAHTKEMSSRFRCRFCHEYFRTLKDKWEHEWRVHKVRKMIVDCLVCGAKFRKYAELKRHCVELHDIEIPPAKKLLKRKSSWAFD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -