Basic Information

Insect: Oegoconia quadripuncta
Gene Symbol: -
Assembly: GCA_949316235.1
Location: OX438746.1:11469108-11481874[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.6 2.4e+02 3.4 0.1 11 23 171 183 167 183 0.87

2 10 3.3e-06 0.0003 22.0 0.9 1 23 189 211 189 211 0.96

3 10 0.00015 0.014 16.7 2.2 1 23 218 240 218 240 0.99

4 10 5.1e-06 0.00047 21.3 0.1 1 23 246 268 246 268 0.94

5 10 4.7e-07 4.4e-05 24.6 0.1 1 23 274 296 274 296 0.98

6 10 4.6e-05 0.0043 18.3 1.0 1 23 302 325 302 325 0.95

7 10 0.00021 0.02 16.2 3.6 1 23 331 354 331 354 0.95

8 10 0.00031 0.029 15.7 1.3 2 23 361 382 360 382 0.97

9 10 1.1e-05 0.0011 20.2 1.1 1 23 388 410 388 410 0.97

10 10 0.0015 0.14 13.5 0.1 1 23 416 440 416 440 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.6	2.4e+02	3.4	0.1	11	23	171	183	167	183	0.87
2	10	3.3e-06	0.0003	22.0	0.9	1	23	189	211	189	211	0.96
3	10	0.00015	0.014	16.7	2.2	1	23	218	240	218	240	0.99
4	10	5.1e-06	0.00047	21.3	0.1	1	23	246	268	246	268	0.94
5	10	4.7e-07	4.4e-05	24.6	0.1	1	23	274	296	274	296	0.98
6	10	4.6e-05	0.0043	18.3	1.0	1	23	302	325	302	325	0.95
7	10	0.00021	0.02	16.2	3.6	1	23	331	354	331	354	0.95
8	10	0.00031	0.029	15.7	1.3	2	23	361	382	360	382	0.97
9	10	1.1e-05	0.0011	20.2	1.1	1	23	388	410	388	410	0.97
10	10	0.0015	0.14	13.5	0.1	1	23	416	440	416	440	0.94

Sequence Information

Coding Sequence: ATGGCTTCTAATTCATTCCTAACTAACATTCCGAAGTTGAAGGGGCGTGAGCATTACCACGAATGGGCCTTTGCAGTGGAGAATTTGCTTATTTTGGAGGGCATAGTGGATTCTATAAAGCAAGAACCTGCTAGTGCACAAGGAGCAGCCGCAGAAGATGCAAAGGCAAAAGCAAAATTAATTCTAACGATCGATCCATCGTTGTATGTCCACATCAAAGACGCCACGTCATCAAAGAACCTATGGACGAAGCTAAAAACTATGTTTGATGATTCAGGATTCTCCAGAAGGATTACGTTGCTGCGAAATTTAATTTCGATTCGGCTCGACAGTTGTGAATCGATGACGAATTGCGTCACGCAAATCATAGAAACGGCTCAGAAATTATCAGGAACTGGTTTTGCGGTGAACGATGAGTGGATTGGCTGTTTGATGCTAGCAGGATTACCCGAAAAATACATGCCAATGATAATGGCGATAGAACATTCTGACGCTACCGACATACCGCTGACTTCTCGCACCCTCCTCAACGAGCATATGAACATCCACAGCGGCAATCGGCCGTACTTGTGTAGTATTTGCAACAAGTCCTTCGCCTCCAAGTACACGTATCAGGCGCATCTCAAGATACATCTGgAGAGGCCCAGACCATTCAAATGCACGCTTTGCTCCAAGACGTTCCTCACGCAACCGAATCTGACGCAGCACGAGAAAACTCACTCTGGCGTCAGGGATTACGTTTGTAACGTCTGTGGCAAAGCTTTCGGCACCCAACACAACCTGGAAGTGCATGGCGTGGTGCATTCAGGCAATAAGCCCTTCGTGTGTGGAGTGTGCGGGAAGGCCTTCGCTAGGAGGGCCGAAGTGAGGGACCACATGCGGACTCACAccgGCGAGCGGCCGTTCGCGTGCGAGCAGTGCGGCGCGCAGTTCGCGCAGCGCTCCAACCTGCACTCGCACCGCCGCGCCACGCACCTCGACGACAAGCGCTACCACTGCGACCAGTGCCCCAAGAAGTTCAAGCGGCGACGGCTGCTGCAGTACCACGTGAAGGCGTCGCACACGGGCGAGCGGCCGCTGCAGTGCGCCACGTGCCGCGCCACCTTCGTGTACCCAGAGCACTACAAGAAGCATCTGCGGATCCACAGCGGGGAGCGGCCCTACGAGTGCGAGGTGTGCGGCAAGTCGTTCAACTCCCGCGACAACCGCAACACGCACCGCTTCGTGCACAGCGACAAGAAGCCCTACGAGTGCCTCGTGTGCGGCGCCGGATACATGCGGAAGCAGCTGCTCTACGCCCACATGAACACCAGCGGTCACCTGGCTGAATCGATAGTGGTGAATCAGCCGAGAGTACAGAAGGTTGTGGAAACTCTATTTGCGACTGAAGAGGAGTTAGAGGTGGAACCATCTGAAACTAAAGCCATTGTGACATCGGAAGATGATACTCCCAAAATATTCGTAACTAGCgataataaactaatattacaaaatgGCAAGTCCACGATAAATCTCGTCCAAGACAACGACGATCCTACATTGCTGACTTTACACAACATCGATGGCAGTATGAAGGCAGAGTCGGGCGCTTTGCTGCAAGGCGTGAACCTCGAGCAAATCGGTGATCAGGCCCAGGTGGTGTCATGCGACTCGACCAACGGTCTGGTGCGGCTGGTGCAGATACAGCTTCAAAACGGGACCAGCGGATGGATGGCCATAACGCAAtaa
Protein Sequence: MASNSFLTNIPKLKGREHYHEWAFAVENLLILEGIVDSIKQEPASAQGAAAEDAKAKAKLILTIDPSLYVHIKDATSSKNLWTKLKTMFDDSGFSRRITLLRNLISIRLDSCESMTNCVTQIIETAQKLSGTGFAVNDEWIGCLMLAGLPEKYMPMIMAIEHSDATDIPLTSRTLLNEHMNIHSGNRPYLCSICNKSFASKYTYQAHLKIHLERPRPFKCTLCSKTFLTQPNLTQHEKTHSGVRDYVCNVCGKAFGTQHNLEVHGVVHSGNKPFVCGVCGKAFARRAEVRDHMRTHTGERPFACEQCGAQFAQRSNLHSHRRATHLDDKRYHCDQCPKKFKRRRLLQYHVKASHTGERPLQCATCRATFVYPEHYKKHLRIHSGERPYECEVCGKSFNSRDNRNTHRFVHSDKKPYECLVCGAGYMRKQLLYAHMNTSGHLAESIVVNQPRVQKVVETLFATEEELEVEPSETKAIVTSEDDTPKIFVTSDNKLILQNGKSTINLVQDNDDPTLLTLHNIDGSMKAESGALLQGVNLEQIGDQAQVVSCDSTNGLVRLVQIQLQNGTSGWMAITQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -