Basic Information

Insect: Oegoconia quadripuncta
Gene Symbol: -
Assembly: GCA_949316235.1
Location: OX438747.1:28330337-28351077[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.7e-06 0.00044 21.4 1.2 2 23 432 454 431 454 0.94

2 18 0.00032 0.03 15.7 2.0 2 23 462 484 462 484 0.97

3 18 1.1e-05 0.001 20.3 1.1 2 23 492 514 491 514 0.96

4 18 2.8e-06 0.00026 22.1 1.3 1 23 520 543 520 543 0.98

5 18 0.0034 0.32 12.4 0.5 2 23 552 574 551 574 0.92

6 18 0.00035 0.033 15.6 0.0 2 23 592 614 591 614 0.95

7 18 0.0023 0.21 13.0 0.4 1 23 647 670 647 670 0.97

8 18 0.09 8.4 8.0 1.3 2 21 678 697 677 698 0.93

9 18 0.1 9.3 7.8 2.0 2 23 707 729 707 729 0.91

10 18 0.0056 0.53 11.8 5.7 1 23 751 774 751 774 0.97

11 18 5.7e-05 0.0054 18.0 0.3 2 23 781 803 780 803 0.96

12 18 4.9e-05 0.0046 18.3 2.2 2 23 810 832 809 832 0.94

13 18 0.012 1.1 10.8 2.2 1 23 838 861 838 861 0.97

14 18 2.1 1.9e+02 3.7 8.1 2 23 869 891 869 891 0.95

15 18 0.00069 0.064 14.6 0.0 1 23 898 921 898 921 0.98

16 18 0.15 14 7.3 3.9 1 22 928 949 928 951 0.88

17 18 0.027 2.6 9.6 2.7 3 23 966 987 965 987 0.91

18 18 5.4 5.1e+02 2.4 0.2 2 16 1008 1022 1007 1024 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.7e-06	0.00044	21.4	1.2	2	23	432	454	431	454	0.94
2	18	0.00032	0.03	15.7	2.0	2	23	462	484	462	484	0.97
3	18	1.1e-05	0.001	20.3	1.1	2	23	492	514	491	514	0.96
4	18	2.8e-06	0.00026	22.1	1.3	1	23	520	543	520	543	0.98
5	18	0.0034	0.32	12.4	0.5	2	23	552	574	551	574	0.92
6	18	0.00035	0.033	15.6	0.0	2	23	592	614	591	614	0.95
7	18	0.0023	0.21	13.0	0.4	1	23	647	670	647	670	0.97
8	18	0.09	8.4	8.0	1.3	2	21	678	697	677	698	0.93
9	18	0.1	9.3	7.8	2.0	2	23	707	729	707	729	0.91
10	18	0.0056	0.53	11.8	5.7	1	23	751	774	751	774	0.97
11	18	5.7e-05	0.0054	18.0	0.3	2	23	781	803	780	803	0.96
12	18	4.9e-05	0.0046	18.3	2.2	2	23	810	832	809	832	0.94
13	18	0.012	1.1	10.8	2.2	1	23	838	861	838	861	0.97
14	18	2.1	1.9e+02	3.7	8.1	2	23	869	891	869	891	0.95
15	18	0.00069	0.064	14.6	0.0	1	23	898	921	898	921	0.98
16	18	0.15	14	7.3	3.9	1	22	928	949	928	951	0.88
17	18	0.027	2.6	9.6	2.7	3	23	966	987	965	987	0.91
18	18	5.4	5.1e+02	2.4	0.2	2	16	1008	1022	1007	1024	0.83

Sequence Information

Coding Sequence: ATGCATATCCTGTGCACAATCTGTAGTGACCTCGTGAACCAGGCGGAGAACATTCACATAACTAAATGTGGTCATATATTCCACTACCATTGCTTGTCACAGTGGATAGAAAGGTCCAAATCGTGCCCACAATGTCGTAACAAAGTGACGGAGAAGTGCACCTTTCGTGTGTACCCGACGATATCGAACGAGCCGACGGGGGACGAGGCAGCCACGCTGCAGTCCAGATTAGACAATGCGCAGCTCCAATTGAGGCAACAGGCAGCTGCGTGCGCCGAGAGCGACGACAAGCTGAGAACTGCACTTGTTGATGTCAAGAGATATGAGGAAGCAGCCAAAGCTTATGAGAAGAAGCTAATCAGCCGAGATTCGGCCGTATCGGCTCTCAAAGAGCAGCTGGAGTATGTGAAGATACAGAATAAGGAGACGCAGAAGTTGAAGGACTCAAATGAGGAGCTTAAGAAGAGTATGCAGATGTTGACTGGTTTGCAGAAGGTGCTGAACGCGACCAGTGACGAGGTTGAGGAGATGCTGCAGGGGTACACAGACGTACGGACAGTCGCCACATTCGCCACCGCACTCAAAAGggCGCTCTGTGAGTCCGAAGCGAAGAAGAAGGAAACCCGAAATTTTGTTGTCGCTGTGAAGCAACACCTGGCAAATGAGAAAATGAACTGTGCGGACTGGCAGACCAAATATATGCAAGTTCAGGAGAAACTCGCTGCTTTAGAGAAGAAATACGCAGCGATCAGCACCAAGAGGAAGGCTTGCGAGATAATGAACGACTCCGTGTCTATACTGGACGACACGCTGACCAATAATGTTAAAGTGAGGAAATCTGATCCTGACATATTTGGTGATAGCATGGTTATACAAGACGATACTAGCTTTAACACAATGGTGGATAGAATAGAGGCAGCCGACTCCCCGTACTTCTGCCTGAAGCAGAGCAGCCTGGCGCTGGCGTCGCTGCAGCGGCCGCAGGGTCACCTCGACAAATTGAAGCCGTCAGAATTCGCCCTGCTCAACTCTGCGAGGCCAGATCAAAGACTTGGATCGGAGAATGTACCCACAAATAATCACAAAAGCATATTCCACAAAAGAGAACCAACCAAACTGGTGTTCAGCGAGGAGAGGAaagatgaaaatatatttaacatcTCTTACGATGGGTTAGGTGGTCATTCCAAGTTAGAGACGTTTCCTAAACCTAAAGTATTAAGCATTAAGCCTAGAGGTAGTATACCTAAGTTAACGGCTAGGCATAAGCTATCAGGTGTGGGACCTGAAATCCGATGTAAATATTGTTGGAAAGTGTTTACCACAGAAAGGAATCTCAAGAGGCACGTTAATCAACTCCATAATCCAGATGTAGAATATCCGACATGTGATGAATGCCATAGGATTTTTAAAGGGAAGCAGTCTTTAATAACCCACATACAAACAACACATGGTGTCGAGAAGGAACACATCAAATGTTATCTCTGTGATAAAGGATATACAAATAACAGAAATCTGAAACGCCACATTGAAACATTTCATGGCGAAAAGGCTGAGTTTAAATGTGATATGTGTCCTAAGGTTTATACATCTAACCAAAGTTTAAGACGACATTCTCGGACTGTGCATAACACTGATAACCAAGATGAGCTCAAATGTGACTACTGTGAGAAGACTTTTACAGAAACAGAGCCTCTAGAAAATCATGTACAATTTTATCATAATATACATACCAGTTCAAACGATAATTCGACGGATACTAAACCTTACACGCCGTGTGAGGAATGCGGTTTAAGCTTTGCAGATGAACCTACTTTAAGAAATCATGTTAAAATTGATCATTCGTTCGAAATTTTCTACGAGTACTGTAAGAAGTCACTTATGAAACGAGTATCTAGAAGTGCAATAGATGGTAGACCTGGTAAACcaaataatttttacaattgCGAGTTTTGTAACAACGCGTTTGGTAGTGTATACGAGTTAAAAGATCATATGAAGATTAATCATGATAGAGACTACTCCCTATCAACATGTAACGTgtgttttagaaaattttatacTAAAGAAACAATGTTTGAACATAAGAAGGTATGTATCCCACCTCGAAACGTTAACTCTTGCAGTCATTGCGACAAATTGTTTACAGATATATCAAGTCTCGAATTTCATAATAGAATTTTTCATCCTCAAGCTCAAATATCTGATGTAACTTCGACAAACATGGAAGACTCTCTTGAGCCTGGTGCTTATAAATGTATGCATTGTGATAGAGTATACTACAGTGACAGATCTTTGAAACATCATATCAAGCTGAAACATACAACAGACGAAGTTGTGGAGTGTGGTCTTTGTGGGAAGGCATGCAGTAATAAGTATTACTTAGCTTCGCATATTAAAATTGTTCATACCAACAGCTCGTGGTCGAAATGCGAATATTGCGATAAACAATTCAAATCTAAGAGGAATATTAGACGACACATTGAATACACTCATCGAGGTATGCAAAGGTACAAATGTATTGAATGTGAAACATTGTTCAAGGAAAAGAGAAGCTTGAGAAAACATGTGAGAACAAAACATCCTAATTCGGCGTCGTTTCCTCAATGTCACTTCTGTCACAAGCGTTTTGAATCTGCGAAATCatgcaaaatacatttaaaacttCTACATTCGTTCAATATGAACACTTATCCTTGCGACTTGTGCCCAGTTTCATTCGGTTCAAATGAAGCTTTAAGCATACACTTGCAAACAAAACACTTGGCTGAAGATGAAATTTATAAGTGTGAAGAATGTAATCTGGTATTCAAAGGACAAGAGAAATTTGATCATCACAATGAACTGTGTCATGTGAATTTAGTTCCTAATATCAAACAGAAAGTTTTACCTCGCTGTATTATCTGTATGAAGGATTTCAGTACCAGAAAAACATTGAAGCGTCATATTAAAAAGTTCCACTCTGGTTTTGACGTGGACGAGTTGGCTACGTTTGGTTCCCGTAAACGAGCCTTTAACGTGGAGTGTGAAGAATGTGTGAAAAACTTCAATGATGACTTTCATTTTAATATCTTTCAAAAACTGAAGCATCTTCGGGATTCGATTATATTTAAATGTGAAACATGTACGTCGTCTTATAATTCTTTAGAGTATGCAATTCAGCGCTACAAAATGACAAATTTAGAATTGAGCGCAAGTAAAATGATTTTGAGCGAGTTATGCACGGCTGAGATGAGTGATGATGAAGCGTCATATTCTGCGTTTGGTTCCTTACATGAAATGATGGAACCAGAGAGTACAACACAGGACATAAAATTGGAACCAATAGATGTAGATGAGGTGATCACGACTGAACAGATGTCGCCCTAG
Protein Sequence: MHILCTICSDLVNQAENIHITKCGHIFHYHCLSQWIERSKSCPQCRNKVTEKCTFRVYPTISNEPTGDEAATLQSRLDNAQLQLRQQAAACAESDDKLRTALVDVKRYEEAAKAYEKKLISRDSAVSALKEQLEYVKIQNKETQKLKDSNEELKKSMQMLTGLQKVLNATSDEVEEMLQGYTDVRTVATFATALKRALCESEAKKKETRNFVVAVKQHLANEKMNCADWQTKYMQVQEKLAALEKKYAAISTKRKACEIMNDSVSILDDTLTNNVKVRKSDPDIFGDSMVIQDDTSFNTMVDRIEAADSPYFCLKQSSLALASLQRPQGHLDKLKPSEFALLNSARPDQRLGSENVPTNNHKSIFHKREPTKLVFSEERKDENIFNISYDGLGGHSKLETFPKPKVLSIKPRGSIPKLTARHKLSGVGPEIRCKYCWKVFTTERNLKRHVNQLHNPDVEYPTCDECHRIFKGKQSLITHIQTTHGVEKEHIKCYLCDKGYTNNRNLKRHIETFHGEKAEFKCDMCPKVYTSNQSLRRHSRTVHNTDNQDELKCDYCEKTFTETEPLENHVQFYHNIHTSSNDNSTDTKPYTPCEECGLSFADEPTLRNHVKIDHSFEIFYEYCKKSLMKRVSRSAIDGRPGKPNNFYNCEFCNNAFGSVYELKDHMKINHDRDYSLSTCNVCFRKFYTKETMFEHKKVCIPPRNVNSCSHCDKLFTDISSLEFHNRIFHPQAQISDVTSTNMEDSLEPGAYKCMHCDRVYYSDRSLKHHIKLKHTTDEVVECGLCGKACSNKYYLASHIKIVHTNSSWSKCEYCDKQFKSKRNIRRHIEYTHRGMQRYKCIECETLFKEKRSLRKHVRTKHPNSASFPQCHFCHKRFESAKSCKIHLKLLHSFNMNTYPCDLCPVSFGSNEALSIHLQTKHLAEDEIYKCEECNLVFKGQEKFDHHNELCHVNLVPNIKQKVLPRCIICMKDFSTRKTLKRHIKKFHSGFDVDELATFGSRKRAFNVECEECVKNFNDDFHFNIFQKLKHLRDSIIFKCETCTSSYNSLEYAIQRYKMTNLELSASKMILSELCTAEMSDDEASYSAFGSLHEMMEPESTTQDIKLEPIDVDEVITTEQMSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -