Basic Information

Insect: Oegoconia quadripuncta
Gene Symbol: -
Assembly: GCA_949316235.1
Location: OX438749.1:32242351-32249525[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00077 0.071 14.5 0.2 1 23 291 314 291 314 0.97

2 12 0.0037 0.34 12.4 5.0 1 23 320 342 320 343 0.96

3 12 4.9e-06 0.00046 21.4 2.5 1 23 348 370 348 370 0.99

4 12 3.1e-05 0.0029 18.9 1.1 1 23 376 398 376 398 0.98

5 12 2.2e-06 0.0002 22.5 0.5 1 23 405 428 405 428 0.97

6 12 4.1e-06 0.00038 21.6 5.3 1 23 434 456 434 456 0.98

7 12 0.0003 0.028 15.8 1.9 1 23 462 484 462 484 0.97

8 12 0.00041 0.038 15.4 1.0 1 23 489 511 489 511 0.99

9 12 0.049 4.6 8.8 5.7 1 23 517 539 517 539 0.95

10 12 2.3e-05 0.0021 19.3 1.6 1 23 545 568 545 568 0.98

11 12 9e-05 0.0084 17.4 2.0 1 23 599 622 599 622 0.97

12 12 6.8e-05 0.0063 17.8 1.0 1 23 628 651 628 651 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00077	0.071	14.5	0.2	1	23	291	314	291	314	0.97
2	12	0.0037	0.34	12.4	5.0	1	23	320	342	320	343	0.96
3	12	4.9e-06	0.00046	21.4	2.5	1	23	348	370	348	370	0.99
4	12	3.1e-05	0.0029	18.9	1.1	1	23	376	398	376	398	0.98
5	12	2.2e-06	0.0002	22.5	0.5	1	23	405	428	405	428	0.97
6	12	4.1e-06	0.00038	21.6	5.3	1	23	434	456	434	456	0.98
7	12	0.0003	0.028	15.8	1.9	1	23	462	484	462	484	0.97
8	12	0.00041	0.038	15.4	1.0	1	23	489	511	489	511	0.99
9	12	0.049	4.6	8.8	5.7	1	23	517	539	517	539	0.95
10	12	2.3e-05	0.0021	19.3	1.6	1	23	545	568	545	568	0.98
11	12	9e-05	0.0084	17.4	2.0	1	23	599	622	599	622	0.97
12	12	6.8e-05	0.0063	17.8	1.0	1	23	628	651	628	651	0.96

Sequence Information

Coding Sequence: atggcTCGCCTACAAGAACGAGCGTTTACCAACGAAGAATATGTTGATATTCTTTATACGTACGGTGTCGCTAGAGGCAATGCCTCAGCTGCCCAGCGCGAATACCAACGCCAGTACCCAAATCGTCGTTTACCTGATGTGGGCGTGTTTTCTCGAGTGTATCGACGAGCCCGTGAGACTGGAAGCTTTCAAAGGCGACgaggcGACGCTGGCAGACCTCGTCTGTACCGTGTCGAAGATGAAGAggaaattttaaaccatttccaAAGAGATCCTACCACCTCCACAAGAAAAGTGGCCAATTTACTTGGTACATCACAATACAAGGTGTGGAAAGTCGTCCATGAATCTGGGCGTCATCCATACCATTACACTCCAGTGCAAGCGCTGGAGGAAGGAGATCCCGTCAGAAGGGTCCAATTTTGCAGATATCTGCTTAACTGCGACATAGAGgacggaaactaccttaaacaaattttatggaCCGATGAATCCAAATTTGATAAAGACGGGATCACTAATTACCATAACGCTCACTTCTGGGAAGAAAAGGTGGTGGGAAATCCAAATCTAAAAAGACCGAAAGGATCCCAAAGAACATTTTCTGTGAATGTGTGGatggctataataaataataatttggttggGCCGTATTTCCTGCCACAGAATTTAAATGATTCTGACAGTTTTGATAACCGCTCCGAGGGTGATATCAAAGACGAAGatCACGAAAGTAAAGTAGATACAAAACCTCCAATGCAAGATGGATCAAATAAACGCAAAAAAATTAAGgaaagaaaaaataaaatatcagaatcaTTAATAGATCATACACTAGAAATAAAAGTGGAGAATGAATACGGAGTCGTATACTCTTGCAAACTGTGTGAAGGTACGTACGCTCAGCTCGAGGAACTACAGACCCACATACGCAATAACCATAAAATCAGACGTGTATATAGATGCCAAATGTGCGACATGGAATTCACAACCAAAGGCAACGAACACAGGCATATGAAATTACATCACAACGTAAGTGGCTACAAATGTGAACTATGTCAGAAGTATTTCACAACAAAAAATTCTCTCAATGTACATGAGAGGACGCATACAAAAGAGAAACCTTTTAAATGTGAGCTGTGCAGCAAAGACTTTGCTTATGCGCAGACGTTGAGAAATCACATGAAGTTACACAATGGCACGAACAAAAGATTTGTCTGTGATCTCTGCGGACACACCTTCAACGACCGAACCAACCTGTCTATCCACATCCGCGTGGTCCATGAGAAAGCCAGGCCGTTCCCATGCACGTTATGCCCGAAGACTTATAGCACTAAGAACCATTTGACTCATCACATGATGAGACACAAGGGCATCCGTCCTTACCAATGTGAAGTGTGTGCAAAAAGTTTTATAACAATATCGTgtttaaaaaatcacaaaacggTCCACGAATCCGGTGGTTACAAGTGTGTAGTGTGCGAAAAAGTGTATAAAGAACGTAAGGGATACACACAGCATGTGCGTTCCCATGGCAATGCGTTGCCTTACAAATGTTTCATATGTTATAAGACATTCTCATGCAAATATTCTATGAAGCGTCATGTAGATGAGCATACGAGTGGGAAAGCGTACTCCTGTGACATATGCCAGCAACGTTTCAATCAAAAGTCTATGGTTGTGAGGCATATGCAACGGAAACATGCTGGCCCGAAGACGTTACAGAAGTGTGATGTGTGCAAACGAAATGTAACAGACTTAgtgaaacataaaataaatcatgTGATCAAACCGTATCAGTGTGATCTTTGTGAGCGTTGCTACTCAGCGAAGACAGCGTTGAATCGTCATTTGAGGTATGTACATTATAACGTTAAATCGTTTGCTTGCGACATGTGTGATAAGAAGTACATAATGAAGAAGAGCTTGAGGAGGCATTTGCTAAAGGTGCATAAGGTTAAGACTGAGCAAGATGATGATGGGAACGAGTTTGATGTcccaattgaaaataatttccaTGTTGATATATTAAGAGCCCCTGAAACCACTGTGGTGGAACAAAAGTGA
Protein Sequence: MARLQERAFTNEEYVDILYTYGVARGNASAAQREYQRQYPNRRLPDVGVFSRVYRRARETGSFQRRRGDAGRPRLYRVEDEEEILNHFQRDPTTSTRKVANLLGTSQYKVWKVVHESGRHPYHYTPVQALEEGDPVRRVQFCRYLLNCDIEDGNYLKQILWTDESKFDKDGITNYHNAHFWEEKVVGNPNLKRPKGSQRTFSVNVWMAIINNNLVGPYFLPQNLNDSDSFDNRSEGDIKDEDHESKVDTKPPMQDGSNKRKKIKERKNKISESLIDHTLEIKVENEYGVVYSCKLCEGTYAQLEELQTHIRNNHKIRRVYRCQMCDMEFTTKGNEHRHMKLHHNVSGYKCELCQKYFTTKNSLNVHERTHTKEKPFKCELCSKDFAYAQTLRNHMKLHNGTNKRFVCDLCGHTFNDRTNLSIHIRVVHEKARPFPCTLCPKTYSTKNHLTHHMMRHKGIRPYQCEVCAKSFITISCLKNHKTVHESGGYKCVVCEKVYKERKGYTQHVRSHGNALPYKCFICYKTFSCKYSMKRHVDEHTSGKAYSCDICQQRFNQKSMVVRHMQRKHAGPKTLQKCDVCKRNVTDLVKHKINHVIKPYQCDLCERCYSAKTALNRHLRYVHYNVKSFACDMCDKKYIMKKSLRRHLLKVHKVKTEQDDDGNEFDVPIENNFHVDILRAPETTVVEQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -