Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_949316235.1
Location
OX438750.1:2200503-2203046[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 5.4e-11 5.8e-08 33.6 0.2 4 45 261 304 258 305 0.94
2 4 2.8e-09 3e-06 28.1 0.2 2 44 312 358 311 360 0.93
3 4 2.4e-12 2.6e-09 38.0 0.0 1 43 364 406 364 408 0.97
4 4 1.8e-05 0.02 15.9 0.0 4 45 418 461 417 462 0.92

Sequence Information

Coding Sequence
ATGGAAACAGACTCGGACACCAGCGATGAAGAAGTACAATTACGAGAACTAAGTCGATTACAAGCTGTCTTGGATGCCGACGAACGAGGCAAATCTCAGCGTCTTTCGCAGTCTACCAGTCACGGCATCGACCCCGAGTCCTTCAAGAAACAGCAAGAGGAGtatcttaataaaatacaaaaagctACTGAATATAATAACTTAACTGACCAAAAATTGGCCCAACTTCAAAGGGTTTTACTTGTCCGACTGCGCGAATGTCGACAGCGGCTGGCGTCAATGTCGAGGTCGTCCACCGCAACTGATAATGAAGAGAAATCATTCCGCTACGTCAGTTGCGGCAAACCTTACTTTAAAGATAAAGATGGCTTTCCGGCACCACCCAATAAAGACACTATAGCAATGTCAAAGATGAAAATGTTTGATTTAACTCTTGTCAGCTCTGTACCCGGGTGGACGATAAAAGACAAGAGTGAGTTCCTAAAACAAATCCACAAAATGTCTGTGGATATAAGAAAAAGCGAGATAGAATCGCAAATAGCTCAATTGCTTCGTGACAAGAAATCCAATGTCCGTAAAAGGGAACTTACATCTCAAATTGCGGTTCTAAGGAAGCAGATTGAGGAACTGAAGAAGAAACCCTTAAGTGAACTGGCATTACCGATAGACAAAGAGTATGATTGGGAAACATTGGCCAACAAGACTAATTATAGGCATAATGCACATGAATACCGGGCACTTTGGAAGTTGTTCTTACATCCttctattaacaaaaacatatggAGCAAGACTGAGCACATGCAATTGCAGAAGCTTGCGCACACTTATAAGATGCAAGACTGGGACAGAATTGCAAGTGAACTAAACACTGGCCGGACTGGATATCAGTGCTTCGTTTACTATAGGACAAATATGAGCACTACGACAATGGGCCAAAAATGGacaaaagaagaagaagagtacCTAAAGAGGTTAATTGACTATTATAAAGAAGATAGCTACATACCTTGGAGCAAAGTAGCAGCATCTATGGAGAAGAGaactaaaatacaaatttacaataaatatgctCGTCTTATGGAGCATAGAAAGGGCAGGTTCGTGCCTGAAGAAGATGCAGTTATTCTCACTTGTGTGAGAAAGTTCGGTACGAATTTTCGGAGAATATCAAAGTACTTACCAGGCCGTTCTATGGCACAATTACGTGCAAGGTACCAAGTTCTAACTGGAGCTAAAACTACATCAATCGTTTGGACTGTAGAGGAAGACAGGAAATTAATTCAGTTCATGGCTAATCAGGACACCTCGATAAACTACTCCAGTTTGACTAAACATTTTAAAGGGAAAGGCAGAGCACATATTAGAGCCCGATACACAACATTAGTGAAATGGATGAGAAAGCATCCCCATGTTGATATTTCTAAAGCCCCACGTCGAGGTGCTCGTCGCTTGGGACATGGCGAAGCATCCCAAGACATAAACTTGGCCATTGAAAACTTAAAGAAAAGAATACATTCAGAAGAGCAGGACAAAAATGCCACTAAGGTCAGTAGTAAAATCACTATGGACTCAACTGAAGAAGAAATTGAAGAGGCTATCATTGTTACTTTATATAATCAAATGTTAGAAAAGCAAGCAGCAAAGCAATCTGTAGAATCTGTTACTGCCAAGGAAAAACAAATGGGCTCCCAAATACCACCAGATGCCACtaacttaaagaaaattttactTTTGCTAAAAGCACAATTGGACAAAGAGAAGTTCTTAGAGAGTTCCTATTATAAAGATTATCCTACTTTGACAAAATTAGAAAAAGACTCGCCCCTTCTTCTTAAATCTTATTCAAAAAAGAAAGCGGTTGAAATGGTGGAAGTTGAAGGTAAACCCGATATATGGGGTAACAAAGTATTGGAAACATCAGAATATGTGTTTCCACCAAACTACGCTACTATAACTGGCTGTCGGCAGCTAATGGCCTATGTGGCTGCTCATCCTCCACCTGAAAATTTGAACGTTATATTGAGTGGGATGGCTCGAAGAAACCCCGCTTTTAAAGAACAAATGGACACTTTGGTGGGACGATTTATTGCATTATTCTTATGGCCCATGTTGCTTTCAAATGAGTCTCCAAGTGAGACCACtgtcaaacctgtatctcatCTTCAAAATAAGCCAAACCTGATACTGCCTGGTGATCCTGGAATAGCAATCCCTAAAGCTATGGTGGATATTGTAAACGAAAATATTGACTTAGAGGATGACTCTGACGATAAGGAAGAAATAGATATAGGGGATGTTCATGTTGGCAAtgatgactttatgtatataaaataa
Protein Sequence
METDSDTSDEEVQLRELSRLQAVLDADERGKSQRLSQSTSHGIDPESFKKQQEEYLNKIQKATEYNNLTDQKLAQLQRVLLVRLRECRQRLASMSRSSTATDNEEKSFRYVSCGKPYFKDKDGFPAPPNKDTIAMSKMKMFDLTLVSSVPGWTIKDKSEFLKQIHKMSVDIRKSEIESQIAQLLRDKKSNVRKRELTSQIAVLRKQIEELKKKPLSELALPIDKEYDWETLANKTNYRHNAHEYRALWKLFLHPSINKNIWSKTEHMQLQKLAHTYKMQDWDRIASELNTGRTGYQCFVYYRTNMSTTTMGQKWTKEEEEYLKRLIDYYKEDSYIPWSKVAASMEKRTKIQIYNKYARLMEHRKGRFVPEEDAVILTCVRKFGTNFRRISKYLPGRSMAQLRARYQVLTGAKTTSIVWTVEEDRKLIQFMANQDTSINYSSLTKHFKGKGRAHIRARYTTLVKWMRKHPHVDISKAPRRGARRLGHGEASQDINLAIENLKKRIHSEEQDKNATKVSSKITMDSTEEEIEEAIIVTLYNQMLEKQAAKQSVESVTAKEKQMGSQIPPDATNLKKILLLLKAQLDKEKFLESSYYKDYPTLTKLEKDSPLLLKSYSKKKAVEMVEVEGKPDIWGNKVLETSEYVFPPNYATITGCRQLMAYVAAHPPPENLNVILSGMARRNPAFKEQMDTLVGRFIALFLWPMLLSNESPSETTVKPVSHLQNKPNLILPGDPGIAIPKAMVDIVNENIDLEDDSDDKEEIDIGDVHVGNDDFMYIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-