Oqua017405.2
Basic Information
- Insect
- Oegoconia quadripuncta
- Gene Symbol
- -
- Assembly
- GCA_949316235.1
- Location
- OX438749.1:25005576-25007897[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-07 0.00011 22.7 0.0 2 36 15 49 14 57 0.90 2 2 1.6 4.7e+02 1.5 0.0 21 29 354 362 349 363 0.89
Sequence Information
- Coding Sequence
- ATGGCTTCGACAAGTCTACAAGGCAAAAGGCAAAAATGGGACAAAGATTCTATGAGTATGGCAATTTTAGctattaaagaaaaaagaatggGATATTTAAAAGCGTCAAAAACTTATGGTGTGCCAAAAACCACACTCATTCGTTTATGCCAAAAAAAAGATATGCCTTTGCAGGAAGTGACAAATATAAAACTTGGGAGAAGAGCAACACTTACTACAGAGTTAGAAAATGATCTAGCTGAGTATGTTCTTCGAATGGAGGAAGCAGGATTTGGATTGACTCGGCGTCATATTATGTCACTAGCATTTCAattggcaaaaaaaaataacttgacTCATAACTTTTCTCAAGAAAAACAGTCAGCTGGTAAAACTTGGTTGCGATTGTTTTTGAAGCGCCACCCAAACCTTTCTTTTCGCCAACCCACTGGCACGTCAATTGCTAGACTGAAGGGTTTCAACAAAGAACATGTCCAAAGATTTTTCACATTGTTAGAAGAAGCTACGGATAAGTACAAATATACACCTAACAATATATATAACGTTGATGAGACCGGTATAACGGTGGTGCCGTCAAAAATGCCCGAAATACTCGCCAGGAAGGGAAAGCGACAAATCAAGGCTACAACATCAGCTGAAAGGGGTTCAACAGTAACCTGTGTATTATGTATGAATGCAAGCGGGTCATTTGTTCCACCCATGATGATTTTTCCCCGTAAGCGGGATCATCCACTTCTAATGAGAGGAGCTCCTCTTGGTTCAATCCACGCATGCCACCCATCAGGCTGGATCCAAACAAATCTGTTCACTCAGTGGTTTCAGCATTTTTTAAAGCACGTAAAGCCTTCGGAAACTTCTCCTGTACTTTTAATATTAGATGGACATGCTAGTCATACACGAAATATTGAGCTTATCGATTTGGCGCGAGAGAACCATGTTCAACTATTATCATTGCCTCCTCATTCAAGCCACAAAATCCAGCCACTAGATCGCACATTCATGGGTCcctttaaaaaatactttactgaagaaattCGGCAATTCGTACGAAATAAAACTCAAGCAGCTACGCATTACGACATTGCTGAACTATTCGGGCATGCCTATGTAAAAGCTCAGCGTGCTGAACTGGCAATCAATGGTTTTCGTGTAACTGGGATCTGGCCAgtgaatataaatgtttttcaaGACCATGACTATATTGATTCTGACGATGACCAATCAACGCCCGGTCAGACCTACACTATTCCTCAAAAACAGAATACTACCCAATTGCCGCCAGCCGTCTCCATTCAAAACAGTGCTGATTATGATTCAGATAAAACTTTGTGTGACGATCCTGAACCTGAGCCAGTGGAAGAACCACAATCTATAAATGAGGAAATCATTGATATGAATGACGAAGATCCACTGGAATCGATTAGCGAACATGTTCTCGATAAGCTACAATCTCCAACCGACAAAACTAGTAGTATCGATAAATCTAAACCAGCTGCACCAATGAGCGATCCTGTGGTTACCGTAGGTGTAAATGAAGTACAAAGTTTAAGCTCATTAGCCTTAGAAGAAATTTCTCAATGCTGTGGTTTACTGGATCAGAATTTGCCACACGTTCTAGATGCAGTACTTGAAACCCCAGTTACAGCTAAAATTAAAGATGACCATAAAATCGAAGTAGTTCAAAATTGCATTCCATCTAAAGAGATAACAGACTTCATAAATTTATCTGCTGGACCTTCTTCGTCTCCTTATTTATCGCCACAACAACTTTACCCTGTACCtcgtatgaaaataaaatccaGTAATAGAGGAAGAAAAGCAACTAAATCAACGTTTCTGACTTCATCGCCGTACAAACTTGATTTGGAAAcatcaaataaaagaaaagaagaagcagaatcattaaaaaaaagaagggaCTTCGCAAAAGAGTTGGAGAAGCCAAAGGAAAGAGTTGGGACAAAGAAGAGATCTAGACCAGAAAGAAAATCACAAGAAAAACCTAAGAAAAAATCAGAGACTAAAAGAAGATcaacaaaaaaacaattgtcAGAAAaagctaaaaagaaaagaaagacgGCACGAAAACAATATAATTCAGCCTCTAGTTCTGAAGATAGTAATTATTCAGTCAACGATGATACTGACAAAAGTCCTGACAGAAGTCAAAATGATAACGCAAAATGCTTATACTGCGAAAGTCTTTTTTCTGAGGACATCCATGGAGAACAATGGGTGCAATGTCCCTCTTGTCGCCAATGGGCTCATGAAATTTGTGCAGGTGTAGAAGGAGGCGAATCTATGTGTGAATTTTGCAATTAA
- Protein Sequence
- MASTSLQGKRQKWDKDSMSMAILAIKEKRMGYLKASKTYGVPKTTLIRLCQKKDMPLQEVTNIKLGRRATLTTELENDLAEYVLRMEEAGFGLTRRHIMSLAFQLAKKNNLTHNFSQEKQSAGKTWLRLFLKRHPNLSFRQPTGTSIARLKGFNKEHVQRFFTLLEEATDKYKYTPNNIYNVDETGITVVPSKMPEILARKGKRQIKATTSAERGSTVTCVLCMNASGSFVPPMMIFPRKRDHPLLMRGAPLGSIHACHPSGWIQTNLFTQWFQHFLKHVKPSETSPVLLILDGHASHTRNIELIDLARENHVQLLSLPPHSSHKIQPLDRTFMGPFKKYFTEEIRQFVRNKTQAATHYDIAELFGHAYVKAQRAELAINGFRVTGIWPVNINVFQDHDYIDSDDDQSTPGQTYTIPQKQNTTQLPPAVSIQNSADYDSDKTLCDDPEPEPVEEPQSINEEIIDMNDEDPLESISEHVLDKLQSPTDKTSSIDKSKPAAPMSDPVVTVGVNEVQSLSSLALEEISQCCGLLDQNLPHVLDAVLETPVTAKIKDDHKIEVVQNCIPSKEITDFINLSAGPSSSPYLSPQQLYPVPRMKIKSSNRGRKATKSTFLTSSPYKLDLETSNKRKEEAESLKKRRDFAKELEKPKERVGTKKRSRPERKSQEKPKKKSETKRRSTKKQLSEKAKKKRKTARKQYNSASSSEDSNYSVNDDTDKSPDRSQNDNAKCLYCESLFSEDIHGEQWVQCPSCRQWAHEICAGVEGGESMCEFCN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01090679;
- 90% Identity
- iTF_01090679;
- 80% Identity
- -