Oqua002318.1
Basic Information
- Insect
- Oegoconia quadripuncta
- Gene Symbol
- -
- Assembly
- GCA_949316235.1
- Location
- OX438741.1:44303960-44306017[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-08 3.8e-06 27.4 0.0 4 37 18 51 17 57 0.93 2 2 8.5 2.5e+03 -0.8 0.0 22 30 142 150 132 151 0.80
Sequence Information
- Coding Sequence
- ATGCCTCGCAAATACGAGAGAACGACACTGCGAGCATCATGGGCCACGAAAGACCTAGAAGAAGCCATGCAAAAAGTAACACGGAAGGAAATGGGAGTAAATGAAGCTTCGAGAACATATAACATACCATCAAGAACTCTGAGAAGACATATTCTAAGTGGTGAATCGAAAGTCCCGCTTGGTCGAAAACCAGTATTTTCTGAAGAGCTCGAAAAAAAGCTGGTTACCCACATAAAAAAGTTAGAGAAGGTGGGATTTGCACCTGAACGCAAAGACGTTAAAGAAATGGCTTTTCAGTTGGCCAAGAAGCTTAAAGTCAAGAACCCGTTTTCTGAAGAATATGAATCAGCTGGAAACGTGTGGTTTAATGGGTTTATGCAACGCAATCCCGAAATAAGCCAAAGGAAATCGGAAGGCCTATCTCTTGCTAGAGCATACGGAGTAAATCGAAAAGACGTGAAAGATTTTTTCGACTTGCTAGCCCAAATCTATGAAGATAATGACTTAGCTAATCACCCGGAAGATGTGTACAACATGGATGAATCTGGTattcaagtaaataataaaccaggCAAAGTAATAGCCCCAAAAGGGGCTAAAGATATTTATACACTCACAAGCAGTGAAAAGGGTGAAAATGTGACATTGATAAGTTGTTGCAATGCACAAGGTAATTTTCTTCCTCCGGTTTTGATTTACAAGGGAACTTATAGCAAACCACAATTTTCCGAAGGACTTCCACCAGGAAGTCAAATATTTATGAACAAGAAATCTTCATACATTAATTCAGATCTCTTCATGAAGTGGTTTGAGGAAATTTTTCTACGTCACAAAAGCCCTCGAAAAACGTTACTGATATTAGATGGTCACAGTTCGCACAGCAACAACATACGCCTGTTAGAAATGGCTAATGAAAATGATGTTATACTGCTTTGTTTACCAAGCCATACAACACATGCGCTGCAACCTTTAGATAGAGCCTTTTTTAGGCCACTGAAAGTTTATTTTGCACAGGAAACCAAGTCATGGATGGTAAGGAATAAAGACAGGAAGTTGACACGTTACGATGTATCAAAACTGATTGGTAATGCTTGGGTTAAAGCTGCTACTATATCCAACGGTGTTTCAGCCTTGAAATGTTGTGGAATTTTCCCCTATAACCCGGGTGCCATTCCCGAACATTATTTTGCCATGTCTGATTCTCTACAAGatcaaaatttaaatgaaaatgtgcAAGTTGAAGAACCCCAAACACGAACACCATCTCCATCAGTGCTGGAAAGTCAAAATATATTCGAAAATCTCCAAGTTGACGAAGACAGAATACCATCCCCATCATGGCTTGAAGAGCAACATTTTCTAGAAAATTTCCAATTTAACAAGCGAACATCCACTCCATCCAGTCTGCAAAATCAAAATTTACTTGAAAACGTCCACGTTGAAGAAGATCGAACATCAAGTCCATTGATGCCTGAAGAACATGGAATTACTCTCGATGATCAAAATATAGTGACGCAGAATGTTAAAGAACCTGATCCAGAAGTCTCAaaacgatttattaattatcCAAATTTTGCTGATTTGATTCCAAAAACtcctgtaaaaaataaaaaacaacatatTGTTCAACCAGGCCCTTCAGGATTAAACACAGGTAAAAGAAACACTACAGATTCGactataagaaaaataatgccAAATGTTGTGGCGCATGAGATTGAACTATGTATCGATAAACCAAGTTCTGCGGGTTCCACTCCCCAAAAGATAGATGGATCGTCAGCATTGCTTCAAAAAACGCCAACTAAGGTATTAGCTGAAACATATCCTGTGCCCAAACTGCCTGTAATGCCATCAAATAGGAAACAAACAGCGGTCATTCTTACTTCTccagaaaatatacaaaaaagaaaattaatttctgatAAAAAGAAACCAAAGACGCAAGCAGAAAAAACAAAACAGACAAAAACTACAAAGAAGGAAAAACAAGATAATGTGAACACTAAACCAAAAAAAGAGGGCAAAAGGAAACGACGACCAGACAGAAAATATTGA
- Protein Sequence
- MPRKYERTTLRASWATKDLEEAMQKVTRKEMGVNEASRTYNIPSRTLRRHILSGESKVPLGRKPVFSEELEKKLVTHIKKLEKVGFAPERKDVKEMAFQLAKKLKVKNPFSEEYESAGNVWFNGFMQRNPEISQRKSEGLSLARAYGVNRKDVKDFFDLLAQIYEDNDLANHPEDVYNMDESGIQVNNKPGKVIAPKGAKDIYTLTSSEKGENVTLISCCNAQGNFLPPVLIYKGTYSKPQFSEGLPPGSQIFMNKKSSYINSDLFMKWFEEIFLRHKSPRKTLLILDGHSSHSNNIRLLEMANENDVILLCLPSHTTHALQPLDRAFFRPLKVYFAQETKSWMVRNKDRKLTRYDVSKLIGNAWVKAATISNGVSALKCCGIFPYNPGAIPEHYFAMSDSLQDQNLNENVQVEEPQTRTPSPSVLESQNIFENLQVDEDRIPSPSWLEEQHFLENFQFNKRTSTPSSLQNQNLLENVHVEEDRTSSPLMPEEHGITLDDQNIVTQNVKEPDPEVSKRFINYPNFADLIPKTPVKNKKQHIVQPGPSGLNTGKRNTTDSTIRKIMPNVVAHEIELCIDKPSSAGSTPQKIDGSSALLQKTPTKVLAETYPVPKLPVMPSNRKQTAVILTSPENIQKRKLISDKKKPKTQAEKTKQTKTTKKEKQDNVNTKPKKEGKRKRRPDRKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -