Oqua003040.1
Basic Information
- Insect
- Oegoconia quadripuncta
- Gene Symbol
- -
- Assembly
- GCA_949316235.1
- Location
- OX438742.1:9112323-9112823[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-11 8.7e-09 35.9 0.0 5 41 1 38 1 41 0.92 2 2 8.5 2.5e+03 -0.8 0.0 30 40 120 131 120 134 0.80
Sequence Information
- Coding Sequence
- ATGAAACTAGCCATTGAAGCTGTTATTGACGGTAGTATGGGCTACTTAAAAGCTGCTGCAACCTACCAGGTACCAAAATCTACATTGCAGGACCGAGTCAATAAATACAAGGAGACTAACGATTTGGAAGCTTCAATAAGAAAAGGCCTAGGAAGATTTAAGCCTGTGTTTTCGATAACACAAGAACAGGACTTATATGAACATGTTTTGTTGATGGAGAGAAGGTTGTTTGGCCTGACTTATAAAGACCTTCGTCGTTTAGCATACCAGCTGGCAAAAATGAACAACcttccaaataattttaatgatacTACCGAACTAGCAGGAGAAGATTGGCTTGCTGGGTTCATGAAGCGACACAGTACTTTATCTCTACGTGCTGCTGAGCGATCCATTGCAAGAGCGATGGGATTTAACATGGTCAGCGTAAACTCATTCTTTGACTTGCTTGAGGAACTTatagataaatacaaatttttgccAACTCCTAACGGTGCCTAA
- Protein Sequence
- MKLAIEAVIDGSMGYLKAAATYQVPKSTLQDRVNKYKETNDLEASIRKGLGRFKPVFSITQEQDLYEHVLLMERRLFGLTYKDLRRLAYQLAKMNNLPNNFNDTTELAGEDWLAGFMKRHSTLSLRAAERSIARAMGFNMVSVNSFFDLLEELIDKYKFLPTPNGA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -