Oqua024063.2
Basic Information
- Insect
- Oegoconia quadripuncta
- Gene Symbol
- -
- Assembly
- GCA_949316235.1
- Location
- OX438754.1:4924291-4926354[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-05 0.0047 17.5 0.0 5 36 1 32 1 40 0.86 2 2 4.3e-13 1.3e-10 41.7 0.0 1 36 131 166 131 172 0.93
Sequence Information
- Coding Sequence
- ATGCTTAAAGCTATATTAGATGTCAAGCGCGGAATGCCTTTGCGGGCTGCTGCAAGAAAACATGGAGTACCCATAGCTACACTTTCGGACAAATACACTGGAAAATCGCCTTTGCTTAGAAAAATAGGTCGCCATACTATTCTTACTCCAGAAGAAGAAGGAATGCTAGAGAAGTGGGTAATAACTTCAGCGCGGTCAAAGTTACCAGTAAATAAGAAACGGCTTCTAGATAGAGTACAACAAATAATAGAGATATCTAAGAAGAATACTCCTTGTAAAAGTGGACGTCCAGGAAAAAAATGGCTTCAGGCATTTCTTAAACGACAGCCTTTAGTAAGGAAACATCTTGAAGCGTCAAAAAGACCCCGCACTAAAACCTGGCCAAGGTATACCGAAGAAGTAATGCTTAAAGCTGTTGAGGCTGTCAAACGTGGAATGAGTGTGtgtaaagcttcaaaaaaacaTGGTGTGCCCAAAACTACGCTTTTGCATAAATGCTCTGGAAAATCACCACTGCACAGCAAAATGGGTCCCAAACCCATACTTACTCCAGAAGAAGAGACAATGTTAAAGGAGTGGATAATAGCTTCAGCAAATACAGATTTTCCAGTAAATAAAGAGCTGTTGTTTGATAGGGTGCAACTATTATTGGAGAAATCTAAGAGGAAAACTCCTTTTAAAAATGGACGGCCTGGAAGGGTATGGCTTAAGGCATTTCTTAGACGACATCCTTTATCAAGAAATCAAATGATAGTGTTAACATCTTAA
- Protein Sequence
- MLKAILDVKRGMPLRAAARKHGVPIATLSDKYTGKSPLLRKIGRHTILTPEEEGMLEKWVITSARSKLPVNKKRLLDRVQQIIEISKKNTPCKSGRPGKKWLQAFLKRQPLVRKHLEASKRPRTKTWPRYTEEVMLKAVEAVKRGMSVCKASKKHGVPKTTLLHKCSGKSPLHSKMGPKPILTPEEETMLKEWIIASANTDFPVNKELLFDRVQLLLEKSKRKTPFKNGRPGRVWLKAFLRRHPLSRNQMIVLTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -