Ospi000215.1
Basic Information
- Insect
- Odynerus spinipes
- Gene Symbol
- Zfy1
- Assembly
- GCA_032403825.1
- Location
- JAIFRP010000002.1:1175135-1181484[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.41 26 5.3 0.3 2 23 121 142 121 143 0.92 2 17 5.4 3.4e+02 1.8 3.7 1 23 149 171 149 171 0.97 3 17 0.034 2.2 8.7 0.5 2 23 177 198 176 198 0.97 4 17 0.015 0.95 9.8 1.9 2 21 476 495 475 495 0.95 5 17 2.3 1.4e+02 3.0 1.0 1 23 563 585 563 585 0.82 6 17 3.7 2.4e+02 2.3 1.2 2 23 766 787 765 787 0.95 7 17 0.3 19 5.7 0.4 3 23 804 824 802 824 0.96 8 17 0.022 1.4 9.3 0.3 1 23 832 854 832 854 0.98 9 17 0.035 2.2 8.7 1.1 2 23 951 972 950 972 0.95 10 17 0.25 16 5.9 0.8 3 23 984 1004 982 1004 0.95 11 17 0.0039 0.25 11.7 0.2 1 23 1081 1103 1081 1103 0.97 12 17 0.036 2.3 8.6 0.3 1 23 1179 1201 1179 1201 0.97 13 17 3.4e-05 0.0022 18.1 0.6 1 23 1207 1229 1207 1229 0.97 14 17 0.0053 0.34 11.2 2.6 1 23 1279 1301 1279 1301 0.97 15 17 0.00087 0.055 13.7 1.7 1 23 1307 1329 1307 1329 0.99 16 17 0.023 1.5 9.2 0.5 2 23 1434 1455 1433 1455 0.97 17 17 2.4 1.5e+02 2.9 0.2 2 23 1463 1484 1463 1484 0.91
Sequence Information
- Coding Sequence
- aTGTCAGGAAGACCGCCTCGTTTGCGGGCACTTCGACCTCGACCTCAACAACATGTCAAAACAGATATAATGCAAAAGATGATTAATGATCTTAAAGAGAATGAAACTGAAATGGAAACCAAAGATGATGACAtggaagaacaagaagaggaaaaggaaactaTGGAATGTTATAAAGCCGATGATCAGACAGAGAATCATAATGTTAATGAGAACTCTTTTCTTACGGAGAAGTTAgttaatatgaaaaatgtcaGTGAGAAGTCTTCGAAGGACCAGTCAAGCGTTAAAGCTTATTTGGAGCAAGTTAAAAAGGAGAGCAAACAAACGataaaaagcaTCCATGATACGAATGGAAATCAATGTCCTATGTGCCCTTATGATGCACTATCTTTACGCGATCTGGAGACTCATCAACGAGTACATCACTTAAAACGAAGATTCTTCCGTTGCGCTAAGTGTTCTTATGTTACCCACGTACGAGCACGTTATACAAAACATGTAAAGTATCATTCCATGCCAATGATCAAGTGCGATGCCTGTGACTTTAGAACACCATATAAGtGGAATTTGGATCGACATACACGTAATCATGGTGGTGGAGGAGCTTTTCAGTGTAGAGCATGTAATTTTACTGCTGACATTCGACAGAGTTTAACTGTGCATGAAACAAATCATCACGAGCCTCCTGTAGGTCAGTCAAGTCGTAAAAGCAATATGCCATTTGAGCGCAAACCACGTAATAGTCCAAAACGTTATAATCAGGTTGGTGCAAGTGACTTTCGAGAACCTATCAGCGCAACTGGAAGCACAACTACATCTATCAGTCTGGGAGAATCTTATAGTTCTGATCAATCCATTGACGATAAGAAAAGTGTACTTGCAGGTGCAGATTGCATAGCTTTAAAATGTGAAGAGAAAGCATGTCAGTTCATAACAGCTTGGGATTCTGAAATGCAACGTCATTTGGCAGAATGTCATGCACCAGCTGGTTTAAACAAATCCAGAAAACCACTACCAATGTTAATTCCATTAAATCCGATTAGCATTAAGCCAAATACCACTTCAAATACCAGTACGCCAACAACATTGTTAAAAGTACCACGCGTCAGGGTAAGACCTGAGCTTGCTCAAATTGCAAGGGATACAGAAATGGCAAAATTGTATGGAAATAAAGAGgCAGGCTCAAAGAAGGATATCAATAATGCAGCGAATgcattcgagagaaaaaatgcaTCCTTCTTTGATaaacttaaagaaaaattgtctacATCAGCAGCCATGAACAATGGGATGCAGGAGGTAGCTGTAAGTAACATGAATGATCTGAAATGTTGGTGTACATTTAAAGCTAGTAGCATGGAAGAACTGGCTTGTCACAAACAAACACACCACACTGCTCTCAGTGTATCTATGGGCATGTCACGTTGTCCTAAATGCAGAAGACGTTGCAAGAGTACGACCGATCTTGAAATACACATGCAGTGTTGTCAGCAAACAAGCAGAGAGCCATCGGTTGATAGTAATTTTGAGAAGGTTACAGAATGCTCGGAACTTCGCATGGCTGCATACAGTAGTGAATATACGTTTCCTTCTCATTTGGAATGGGACACCAGTCTTGGAGGGCACAATTCTTCTGGATCTTCGGTCGAAGGAACTTCTGCACATCCAAATGGACGACGAGTATTCAAGTGTCCTCATTGTCCATTCTGGGCATCCACTGCAAGTCGTTTTCACGTGCACATAGTTGGTCATTTAAATCGGAAACCGTTTGAATGTTCTCTCTGCGCATATCGTTCTAATTGGAGATGGGATATTACAAAGCATATTAAGCTTAAAGCAGCAAAAGATCCGGTGCATTTGACTGCTAGAGTACTTATGACTGATGAGACAGGTCGacgaaattattcaaaatataacaaataccTTGCACAGgtTGAGCAACAAGTATGGGACGATCAGAATATGGATGAAAGAAGtatagaagaaattaattttagcGAGCCACCAACTAAGTTGTTAATTATGAGTAGTAAAGAATACACAACACCTGAGCTTACTTCCGAGGGCGACTCTCTGTTGacaacgaacgaaggaaatcaTAACGAAAGCACCGTATCTTTACGACCTCCGCCTCTGTTAAAAGCTACGGTTAAGAGCCGTGGACAGTCGTTGCTTAAAAGCAGCCCTACAAATGTACAAAGTTCAAATATGTCTATCTCTACTTctacaacaacagcaacaccGACGACGACCACAACCATAACCGTAGACGATAATAAGCGTACTTTGTGGAAATGTAAACGATGTAACTACAGAGATTCTAATAAGGATACAGTTCTGTTACACGTAAAATCTCACTACGAGGTCGTAGATCAAAATGCCAATGAAGAACGTAATGCATATGGTTGCGGAGATTGCCCATTCTCAGCATCGGACACAGCATCTTTATCGACACATAGAATGCATCATCGTCCTAACAGAGACGCGATATTTAAATGTTATCTCTGTCCATATTATGTTAATACAAAAGCCGAATTATTGGAACATGCAAGACTTCATGGCGAGGAGCTAGCAGTTGTCCATCAGCAAAGTATGGATTTTCGCATGCCCGTTACAAAATGCAAGCTGCAAGTTATCAATCCTGAAGACAGTGGCAGtagctcgaagaaagaaacttcCGTAGAAGAGATTATGCCTACCACATCGAAGAACAACTCGACACTTGTATCAAGTGCGGCAACGAAAACTTCAAACGCACCACCACCTCTTCTTCTGGACACTCGTGCATTACCAGACGCACCATTAGTCTGGGTATCACGACCGGACGGTACtctaacaaaaatgttaaaatgtcGACACTGCCCTTACGTGACGTCTCGTCGCGCCGAGGTTCGCGATCACGAGACCATGCACGTTGATTGTCCGAGTCAAGAGCCCGTGATAGCCTGCGGGGACTGTAGTTTCACCTGCACTCGCAGAGAAGTGATGACAGCTCACACGGACATGCATTCAGGCTCTTTAGGAACTGTTCACTGCCTCGTCGATCAAACTCGATCAGATTCTCAACAACTCAATGACCTAGCGACGCTACTCGGATTGACACATCAGCCAATTTTGGGAGCGGAACCGGATCTACGTGATCTGCGATTGGTACATTGTTGCGGTAAATGTCCAGCCCGGTTTCTCTGCGAGAAGGAATTGAGAATACATTTGCGTTATCACTCGACGGAGCTAGCATACATGTGCCAGTGGTGTTCCTACGCTGCGCGCCAACCAGCTCATCTACTCGCTCATCAGAAAGCACACTCCACTGAATATCAAGAGCGTACGAAATACCTGTTAACTCTGTACGGACACTCCCAAAGATATCCACCACCTGCTACGGCATGCGTGGAAGCTAACGATCAAGAGTTCAGCGACTCCTCGACTAACATAGCATGGATCGTCGTGGAAGTGTCAGAAAATACATCGTCTTACACATTGAATAACTCTTTCGCAACGACTGCTACTCAACGAACAGGCAATCAAGTGTTCACCTGTGCCAAGTGTCCTGCACGGTACTTCAAATTAGATGCTTTGGAATATCACATGACTCTGCACGGGTCTAACAACCGCTTCAAATGTTCAGAATGCGATTACTCTTCCAAAACAGCTCAGAATCTGATAAAACATCAAGTGGTACACCGAAGGCATAACGAAACCAACGAAGTCGCGTCACCAAACTCTTCCTCTACGTCCGCACCGGATCCACAATTTGGTGTATTTATGCGTGGCAATCCAAACTTCGTTTATCCTGGCTACTTACGTAATGGTCgattgaaagaaaaacgttacAAATGTCACAAGTGTCCTTCGGCTTTTGAGAAGCGTGAACAGTACCGTGTTCATTTAACGTTACATGGTGCCAAGCAACGTTACCGATGCGATACATGCGACTACTCCGTCAAATACTACGCAAATTATATTCAACATTTGAAGAAGCATCAGGCTAACGCAGAAGCGCAAGCCTCTCGACGTCGGCTAGAAGATGACACTATATCCATTGACAGTGATGGCATCACCGATACAACATCGAGCTGTCGTTCTGGCAAAACGATCAGATCTAGCACGACAGCGGCACCTGTTACGACGATTTCCGTCTCAACTGTTAACTCAACAGTTGGGAGCGGTGGTGTAACATCAGTTTTGACAACACCCAGTTCCTTGCAGGTGTCTAATCAAGACAAGCAAACTTTGATCCTGATGCAAAAGAAGGGTATGCTTTTAccatcgaacgagaacgatacCGAGACGATTCGTTGCCAGAACTGTCCTTTCTCGACGAGCGACAAGGAAGCCATGGATGCTCATAAAAGACGTCATGGAATCGAACGAATGACGCCATCTTGTCCGCATTGCGATTACATTCCTCGGAGAGACGAGAACGTCGGTGAACACATCAGGCTGCATTTCACGCGACTCTACAAACCGGAATCTTATCTAATCATAGAGCTTCTCACGTTGACGATGAGAAAGGTCGCTGTTAATGGGAAAGAGGAACAAAACAAGAATACGGAGTTGCTTTTTAAGGAATACGCCGATGGAAGATTTTTCCCACAAATGGACGGAAATTCGAGCTCATTCAATGTTAATACACCtcatgttaataattttaaggAAAAAGTTATAGTGGATCCGAATACGGGAGAGACGAAGCAACGTGTAACTGTTTAA
- Protein Sequence
- MSGRPPRLRALRPRPQQHVKTDIMQKMINDLKENETEMETKDDDMEEQEEEKETMECYKADDQTENHNVNENSFLTEKLVNMKNVSEKSSKDQSSVKAYLEQVKKESKQTIKSIHDTNGNQCPMCPYDALSLRDLETHQRVHHLKRRFFRCAKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHETNHHEPPVGQSSRKSNMPFERKPRNSPKRYNQVGASDFREPISATGSTTTSISLGESYSSDQSIDDKKSVLAGADCIALKCEEKACQFITAWDSEMQRHLAECHAPAGLNKSRKPLPMLIPLNPISIKPNTTSNTSTPTTLLKVPRVRVRPELAQIARDTEMAKLYGNKEAGSKKDINNAANAFERKNASFFDKLKEKLSTSAAMNNGMQEVAVSNMNDLKCWCTFKASSMEELACHKQTHHTALSVSMGMSRCPKCRRRCKSTTDLEIHMQCCQQTSREPSVDSNFEKVTECSELRMAAYSSEYTFPSHLEWDTSLGGHNSSGSSVEGTSAHPNGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAAKDPVHLTARVLMTDETGRRNYSKYNKYLAQVEQQVWDDQNMDERSIEEINFSEPPTKLLIMSSKEYTTPELTSEGDSLLTTNEGNHNESTVSLRPPPLLKATVKSRGQSLLKSSPTNVQSSNMSISTSTTTATPTTTTTITVDDNKRTLWKCKRCNYRDSNKDTVLLHVKSHYEVVDQNANEERNAYGCGDCPFSASDTASLSTHRMHHRPNRDAIFKCYLCPYYVNTKAELLEHARLHGEELAVVHQQSMDFRMPVTKCKLQVINPEDSGSSSKKETSVEEIMPTTSKNNSTLVSSAATKTSNAPPPLLLDTRALPDAPLVWVSRPDGTLTKMLKCRHCPYVTSRRAEVRDHETMHVDCPSQEPVIACGDCSFTCTRREVMTAHTDMHSGSLGTVHCLVDQTRSDSQQLNDLATLLGLTHQPILGAEPDLRDLRLVHCCGKCPARFLCEKELRIHLRYHSTELAYMCQWCSYAARQPAHLLAHQKAHSTEYQERTKYLLTLYGHSQRYPPPATACVEANDQEFSDSSTNIAWIVVEVSENTSSYTLNNSFATTATQRTGNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCSECDYSSKTAQNLIKHQVVHRRHNETNEVASPNSSSTSAPDPQFGVFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYIQHLKKHQANAEAQASRRRLEDDTISIDSDGITDTTSSCRSGKTIRSSTTAAPVTTISVSTVNSTVGSGGVTSVLTTPSSLQVSNQDKQTLILMQKKGMLLPSNENDTETIRCQNCPFSTSDKEAMDAHKRRHGIERMTPSCPHCDYIPRRDENVGEHIRLHFTRLYKPESYLIIELLTLTMRKVAVNGKEEQNKNTELLFKEYADGRFFPQMDGNSSSFNVNTPHVNNFKEKVIVDPNTGETKQRVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01513756;
- 90% Identity
- -
- 80% Identity
- -